RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	RGS17	Q9UGC6	210 aa	Predicted RBP	19.82	■□□□□ 0.76
MATR3-238	ENST00000512107	SMG6	Q86US8	1419 aa	Known RBP	19.82	■□□□□ 0.76
MATR3-238	ENST00000512107	HOXC9	P31274	260 aa		19.81	■□□□□ 0.76
MATR3-238	ENST00000512107	PRKRIP1	Q9H875	184 aa	Predicted RBP	19.81	■□□□□ 0.76
MATR3-238	ENST00000512107	HSP90AB2P	Q58FF8	381 aa		19.8	■□□□□ 0.76
MATR3-238	ENST00000512107	RGPD2	P0DJD1	1756 aa		19.8	■□□□□ 0.76
MATR3-238	ENST00000512107	MEX3C	Q5U5Q3	659 aa	Known RBP	19.79	■□□□□ 0.76
MATR3-238	ENST00000512107	IP6K1	Q92551	441 aa		19.79	■□□□□ 0.76
MATR3-238	ENST00000512107	BTG4	Q9NY30	223 aa		19.79	■□□□□ 0.76
MATR3-238	ENST00000512107	AFF2	P51816	1311 aa		19.78	■□□□□ 0.76
MATR3-238	ENST00000512107	MTHFS	P49914	203 aa		19.78	■□□□□ 0.76
MATR3-238	ENST00000512107	CCDC184	Q52MB2	194 aa		19.78	■□□□□ 0.76
MATR3-238	ENST00000512107	FNBP4	Q8N3X1	1017 aa	Predicted RBP	19.78	■□□□□ 0.76
MATR3-238	ENST00000512107	NGLY1	Q96IV0	654 aa		19.78	■□□□□ 0.76
MATR3-238	ENST00000512107	NWD2	Q9ULI1	1742 aa		19.78	■□□□□ 0.76
MATR3-238	ENST00000512107	COL3A1	P02461	1466 aa	Predicted RBP	19.78	■□□□□ 0.76
MATR3-238	ENST00000512107	COL5A2	P05997	1499 aa	Predicted RBP	19.78	■□□□□ 0.76
MATR3-238	ENST00000512107	PPM1G	O15355	546 aa	Predicted RBP	19.77	■□□□□ 0.76
MATR3-238	ENST00000512107	AMPH	P49418	695 aa		19.75	■□□□□ 0.75
MATR3-238	ENST00000512107	ABCC6	O95255	1503 aa		19.75	■□□□□ 0.75
MATR3-238	ENST00000512107	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	19.74	■□□□□ 0.75
MATR3-238	ENST00000512107	RTL1	A6NKG5	1358 aa		19.74	■□□□□ 0.75
MATR3-238	ENST00000512107	FLT4	P35916	1363 aa		19.74	■□□□□ 0.75
MATR3-238	ENST00000512107	RALBP1	Q15311	655 aa		19.74	■□□□□ 0.75
MATR3-238	ENST00000512107	DIEXF	Q68CQ4	756 aa	Known RBP	19.74	■□□□□ 0.75
MATR3-238	ENST00000512107	LARP1	Q6PKG0	1096 aa	Known RBP	19.74	■□□□□ 0.75
MATR3-238	ENST00000512107	LTV1	Q96GA3	475 aa	Predicted RBP	19.74	■□□□□ 0.75
MATR3-238	ENST00000512107	CDK12	Q9NYV4	1490 aa	Predicted RBP	19.73	■□□□□ 0.75
MATR3-238	ENST00000512107	STRN4	Q9NRL3	753 aa		19.73	■□□□□ 0.75
MATR3-238	ENST00000512107	INSR	P06213	1382 aa		19.72	■□□□□ 0.75
MATR3-238	ENST00000512107	EIF4A2	Q14240	407 aa	Known RBP	19.72	■□□□□ 0.75
MATR3-238	ENST00000512107	ANKRD24	Q8TF21	1146 aa		19.72	■□□□□ 0.75
MATR3-238	ENST00000512107	USP21	Q9UK80	565 aa		19.72	■□□□□ 0.75
MATR3-238	ENST00000512107	ATRN	O75882	1429 aa		19.71	■□□□□ 0.75
MATR3-238	ENST00000512107	BLM	P54132	1417 aa	Predicted RBP	19.71	■□□□□ 0.75
MATR3-238	ENST00000512107	UNC5CL	Q8IV45	518 aa		19.71	■□□□□ 0.75
MATR3-238	ENST00000512107	ERBB3	P21860	1342 aa		19.71	■□□□□ 0.75
MATR3-238	ENST00000512107	MYBBP1A	Q9BQG0	1328 aa	Known RBP	19.71	■□□□□ 0.75
MATR3-238	ENST00000512107	GLI3	P10071	1580 aa		19.7	■□□□□ 0.74
MATR3-238	ENST00000512107	POTEA	Q6S8J7	498 aa		19.7	■□□□□ 0.74
MATR3-238	ENST00000512107	FAM208A	Q9UK61	1670 aa	Known RBP	19.7	■□□□□ 0.74
MATR3-238	ENST00000512107	RGPD1	P0DJD0	1748 aa		19.7	■□□□□ 0.74
MATR3-238	ENST00000512107	KIF24	Q5T7B8	1368 aa		19.7	■□□□□ 0.74
MATR3-238	ENST00000512107	IL13	P35225	146 aa		19.69	■□□□□ 0.74
MATR3-238	ENST00000512107	ANP32C	O43423	234 aa		19.68	■□□□□ 0.74
MATR3-238	ENST00000512107	NBPF6	Q5VWK0	638 aa		19.68	■□□□□ 0.74
MATR3-238	ENST00000512107	USHBP1	Q8N6Y0	703 aa		19.68	■□□□□ 0.74
MATR3-238	ENST00000512107	NBPF4	Q96M43	638 aa		19.68	■□□□□ 0.74
MATR3-238	ENST00000512107	MIER1	Q8N108	512 aa		19.67	■□□□□ 0.74
MATR3-238	ENST00000512107	WDR17	Q8IZU2	1322 aa		19.67	■□□□□ 0.74
MATR3-238	ENST00000512107	EVA1C	P58658	441 aa		19.65	■□□□□ 0.74
MATR3-238	ENST00000512107	VPS72	Q15906	364 aa		19.65	■□□□□ 0.74
MATR3-238	ENST00000512107	EYA1	Q99502	592 aa		19.65	■□□□□ 0.74
MATR3-238	ENST00000512107	QTRT2	Q9H974	415 aa	Known RBP	19.65	■□□□□ 0.74
MATR3-238	ENST00000512107	SPATA31A5	Q5VU36	1347 aa		19.65	■□□□□ 0.74
MATR3-238	ENST00000512107	SPATA31A7	Q8IWB4	1347 aa		19.65	■□□□□ 0.74
MATR3-238	ENST00000512107	SPATA31A1	Q5TZJ5	1347 aa		19.64	■□□□□ 0.73
MATR3-238	ENST00000512107	CRB1	P82279	1406 aa		19.64	■□□□□ 0.73
MATR3-238	ENST00000512107	WNK3	Q9BYP7	1800 aa		19.63	■□□□□ 0.73
MATR3-238	ENST00000512107	NCAPD2	Q15021	1401 aa		19.63	■□□□□ 0.73
MATR3-238	ENST00000512107	CSB-PGBD3	P0DP91	1061 aa		19.63	■□□□□ 0.73
MATR3-238	ENST00000512107	AEBP1	Q8IUX7	1158 aa		19.63	■□□□□ 0.73
MATR3-238	ENST00000512107	USP35	Q9P2H5	1018 aa		19.63	■□□□□ 0.73
MATR3-238	ENST00000512107	TOM1L2	Q6ZVM7	507 aa		19.62	■□□□□ 0.73
MATR3-238	ENST00000512107	NLRP2	Q9NX02	1062 aa		19.62	■□□□□ 0.73
MATR3-238	ENST00000512107	DIAPH1	O60610	1272 aa	Known RBP	19.61	■□□□□ 0.73
MATR3-238	ENST00000512107	CARD10	Q9BWT7	1032 aa		19.61	■□□□□ 0.73
MATR3-238	ENST00000512107	TRPC5	Q9UL62	973 aa	Predicted RBP	19.61	■□□□□ 0.73
MATR3-238	ENST00000512107	IGSF1	Q8N6C5	1336 aa		19.6	■□□□□ 0.73
MATR3-238	ENST00000512107	GJD4	Q96KN9	370 aa	Predicted RBP	19.6	■□□□□ 0.73
MATR3-238	ENST00000512107	DISP2	A7MBM2	1401 aa		19.59	■□□□□ 0.73
MATR3-238	ENST00000512107	ZNF772	Q68DY9	489 aa	Predicted RBP	19.59	■□□□□ 0.73
MATR3-238	ENST00000512107	CCDC9	Q9Y3X0	531 aa	Known RBP	19.59	■□□□□ 0.73
MATR3-238	ENST00000512107	MEGF6	O75095	1541 aa		19.59	■□□□□ 0.73
MATR3-238	ENST00000512107	THSD7A	Q9UPZ6	1657 aa		19.58	■□□□□ 0.72
MATR3-238	ENST00000512107	HMOX1	P09601	288 aa		19.57	■□□□□ 0.72
MATR3-238	ENST00000512107	FAM98C	Q17RN3	349 aa	Known RBP	19.56	■□□□□ 0.72
MATR3-238	ENST00000512107	SHANK3	Q9BYB0	1731 aa		19.56	■□□□□ 0.72
MATR3-238	ENST00000512107	U2SURP	O15042	1029 aa	Known RBP	19.55	■□□□□ 0.72
MATR3-238	ENST00000512107	SULT6B1	Q6IMI4	303 aa		19.55	■□□□□ 0.72
MATR3-238	ENST00000512107	TCP11L2	Q8N4U5	519 aa		19.55	■□□□□ 0.72
MATR3-238	ENST00000512107	CFAP53	Q96M91	514 aa		19.55	■□□□□ 0.72
MATR3-238	ENST00000512107	BRWD3	Q6RI45	1802 aa		19.55	■□□□□ 0.72
MATR3-238	ENST00000512107	ONECUT3	O60422	494 aa	Predicted RBP	19.53	■□□□□ 0.72
MATR3-238	ENST00000512107	MRS2	Q9HD23	443 aa		19.53	■□□□□ 0.72
MATR3-238	ENST00000512107	LRRC37A3	O60309	1634 aa		19.53	■□□□□ 0.72
MATR3-238	ENST00000512107	KDR	P35968	1356 aa		19.53	■□□□□ 0.72
MATR3-238	ENST00000512107	RGS12	O14924	1447 aa		19.52	■□□□□ 0.72
MATR3-238	ENST00000512107	RBM6	P78332	1123 aa	Known RBP	19.52	■□□□□ 0.72
MATR3-238	ENST00000512107	BARGIN	Q6ZT62	677 aa		19.52	■□□□□ 0.72
MATR3-238	ENST00000512107	PNISR	Q8TF01	805 aa	Known RBP	19.52	■□□□□ 0.72
MATR3-238	ENST00000512107	RSPH6A	Q9H0K4	717 aa		19.52	■□□□□ 0.72
MATR3-238	ENST00000512107	PARP4	Q9UKK3	1724 aa	Known RBP	19.51	■□□□□ 0.71
MATR3-238	ENST00000512107	U2AF1L5	P0DN76	240 aa	Predicted RBP	19.5	■□□□□ 0.71
MATR3-238	ENST00000512107	RXRB	P28702	533 aa		19.5	■□□□□ 0.71
MATR3-238	ENST00000512107	U2AF1	Q01081	240 aa	Known RBP eCLIP	19.5	■□□□□ 0.71
MATR3-238	ENST00000512107	ADAMTS8	Q9UP79	889 aa		19.5	■□□□□ 0.71
MATR3-238	ENST00000512107	OVOS2	A0A0G2JMS6	1433 aa		19.5	■□□□□ 0.71
MATR3-238	ENST00000512107	PKD1L3	Q7Z443	1732 aa		19.49	■□□□□ 0.71
MATR3-238	ENST00000512107	SEPT12	Q8IYM1	358 aa		19.49	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms