RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 ALG2Q9H553 416 aa7.38□□□□□ -1.23
CALCOCO2-220ENST00000511816 CDV3Q9UKY7 258 aaKnown RBP7.38□□□□□ -1.23
CALCOCO2-220ENST00000511816 ACIN1Q9UKV3 1341 aaKnown RBP7.37□□□□□ -1.23
CALCOCO2-220ENST00000511816 GPR37L1O60883 481 aa7.37□□□□□ -1.23
CALCOCO2-220ENST00000511816 TRIM52Q96A61 297 aa7.37□□□□□ -1.23
CALCOCO2-220ENST00000511816 PPP1R15AO75807 674 aaPredicted RBP7.36□□□□□ -1.23
CALCOCO2-220ENST00000511816 SH3BP5LQ7L8J4 393 aa7.36□□□□□ -1.23
CALCOCO2-220ENST00000511816 TOR4AQ9NXH8 423 aa7.36□□□□□ -1.23
CALCOCO2-220ENST00000511816 VASH1Q7L8A9 365 aaPredicted RBP7.35□□□□□ -1.23
CALCOCO2-220ENST00000511816 SH3RF1Q7Z6J0 888 aa7.35□□□□□ -1.23
CALCOCO2-220ENST00000511816 DZIP3Q86Y13 1208 aaKnown RBP7.35□□□□□ -1.23
CALCOCO2-220ENST00000511816 MPNDQ8N594 471 aa7.35□□□□□ -1.23
CALCOCO2-220ENST00000511816 TLL2Q9Y6L7 1015 aa7.35□□□□□ -1.23
CALCOCO2-220ENST00000511816 PDE4CQ08493 712 aa7.34□□□□□ -1.23
CALCOCO2-220ENST00000511816 NBPF20Q3BBV1 942 aa7.34□□□□□ -1.23
CALCOCO2-220ENST00000511816 PCDHB9Q9Y5E1 797 aa7.34□□□□□ -1.23
CALCOCO2-220ENST00000511816 ADH1CP00326 375 aa7.33□□□□□ -1.24
CALCOCO2-220ENST00000511816 SLFNL1Q499Z3 407 aa7.33□□□□□ -1.24
CALCOCO2-220ENST00000511816 TRMT44Q8IYL2 757 aaKnown RBP7.33□□□□□ -1.24
CALCOCO2-220ENST00000511816 ADAM32Q8TC27 787 aa7.33□□□□□ -1.24
CALCOCO2-220ENST00000511816 PPP1R12CQ9BZL4 782 aa7.33□□□□□ -1.24
CALCOCO2-220ENST00000511816 SIAH2O43255 324 aa7.32□□□□□ -1.24
CALCOCO2-220ENST00000511816 NR5A1Q13285 461 aa7.32□□□□□ -1.24
CALCOCO2-220ENST00000511816 CTC1Q2NKJ3 1217 aa7.32□□□□□ -1.24
CALCOCO2-220ENST00000511816 ERFEQ4G0M1 354 aa7.32□□□□□ -1.24
CALCOCO2-220ENST00000511816 CCDC125Q86Z20 511 aa7.32□□□□□ -1.24
CALCOCO2-220ENST00000511816 NFATC2IPQ8NCF5 419 aa7.32□□□□□ -1.24
CALCOCO2-220ENST00000511816 MAP4K5Q9Y4K4 846 aa7.32□□□□□ -1.24
CALCOCO2-220ENST00000511816 PALM3A6NDB9 673 aaPredicted RBP7.31□□□□□ -1.24
CALCOCO2-220ENST00000511816 J3QL48 77 aa7.31□□□□□ -1.24
CALCOCO2-220ENST00000511816 LZTS3O60299 673 aaPredicted RBP7.31□□□□□ -1.24
CALCOCO2-220ENST00000511816 C4orf48Q5BLP8 95 aa7.31□□□□□ -1.24
CALCOCO2-220ENST00000511816 RNF20Q5VTR2 975 aa7.31□□□□□ -1.24
CALCOCO2-220ENST00000511816 ADAMTS19Q8TE59 1207 aa7.31□□□□□ -1.24
CALCOCO2-220ENST00000511816 CDK15Q96Q40 435 aa7.31□□□□□ -1.24
CALCOCO2-220ENST00000511816 C1QTNF2Q9BXJ5 285 aa7.31□□□□□ -1.24
CALCOCO2-220ENST00000511816 ATP9BO43861 1147 aa7.3□□□□□ -1.24
CALCOCO2-220ENST00000511816 SMPD1P17405 629 aa7.3□□□□□ -1.24
CALCOCO2-220ENST00000511816 FSHRP23945 695 aa7.3□□□□□ -1.24
CALCOCO2-220ENST00000511816 LMOD1P29536 600 aaPredicted RBP7.3□□□□□ -1.24
CALCOCO2-220ENST00000511816 DHX9Q08211 1270 aaKnown RBP7.3□□□□□ -1.24
CALCOCO2-220ENST00000511816 NNTQ13423 1086 aa7.3□□□□□ -1.24
CALCOCO2-220ENST00000511816 TRAF7Q6Q0C0 670 aa7.3□□□□□ -1.24
CALCOCO2-220ENST00000511816 PBXIP1Q96AQ6 731 aa7.3□□□□□ -1.24
CALCOCO2-220ENST00000511816 AXIN1O15169 862 aa7.29□□□□□ -1.24
CALCOCO2-220ENST00000511816 RNF135Q8IUD6 432 aa7.29□□□□□ -1.24
CALCOCO2-220ENST00000511816 CEP126Q9P2H0 1117 aa7.29□□□□□ -1.24
CALCOCO2-220ENST00000511816 TFIP11Q9UBB9 837 aaKnown RBP7.29□□□□□ -1.24
CALCOCO2-220ENST00000511816 SKIP12755 728 aa7.28□□□□□ -1.24
CALCOCO2-220ENST00000511816 RFX1P22670 979 aa7.28□□□□□ -1.24
CALCOCO2-220ENST00000511816 MAP7D1Q3KQU3 841 aa7.28□□□□□ -1.24
CALCOCO2-220ENST00000511816 KCTD15Q96SI1 283 aaPredicted RBP7.28□□□□□ -1.24
CALCOCO2-220ENST00000511816 AVPP01185 164 aa7.27□□□□□ -1.25
CALCOCO2-220ENST00000511816 PDIA4P13667 645 aaKnown RBP7.27□□□□□ -1.25
CALCOCO2-220ENST00000511816 CCDC116Q8IYX3 515 aa7.27□□□□□ -1.25
CALCOCO2-220ENST00000511816 PGPEP1Q9NXJ5 209 aa7.27□□□□□ -1.25
CALCOCO2-220ENST00000511816 EMILIN1Q9Y6C2 1016 aa7.27□□□□□ -1.25
CALCOCO2-220ENST00000511816 CAPN5O15484 640 aaPredicted RBP7.26□□□□□ -1.25
CALCOCO2-220ENST00000511816 CFAP70Q5T0N1 1121 aa7.26□□□□□ -1.25
CALCOCO2-220ENST00000511816 SEPT12Q8IYM1 358 aa7.26□□□□□ -1.25
CALCOCO2-220ENST00000511816 HPS1Q92902 700 aa7.26□□□□□ -1.25
CALCOCO2-220ENST00000511816 SIRT1Q96EB6 747 aa7.26□□□□□ -1.25
CALCOCO2-220ENST00000511816 UCN2Q96RP3 112 aa7.26□□□□□ -1.25
CALCOCO2-220ENST00000511816 OCSTAMPQ9BR26 566 aa7.26□□□□□ -1.25
CALCOCO2-220ENST00000511816 ESF1Q9H501 851 aaKnown RBP7.26□□□□□ -1.25
CALCOCO2-220ENST00000511816 VRTNQ9H8Y1 702 aa7.26□□□□□ -1.25
CALCOCO2-220ENST00000511816 MAFBQ9Y5Q3 323 aaPredicted RBP7.26□□□□□ -1.25
CALCOCO2-220ENST00000511816 UPP2O95045 317 aa7.25□□□□□ -1.25
CALCOCO2-220ENST00000511816 CSB-PGBD3P0DP91 1061 aa7.25□□□□□ -1.25
CALCOCO2-220ENST00000511816 WDR4P57081 412 aaKnown RBP7.25□□□□□ -1.25
CALCOCO2-220ENST00000511816 MYT1Q01538 1121 aa7.25□□□□□ -1.25
CALCOCO2-220ENST00000511816 EML3Q32P44 896 aa7.25□□□□□ -1.25
CALCOCO2-220ENST00000511816 TBC1D9Q6ZT07 1266 aa7.25□□□□□ -1.25
CALCOCO2-220ENST00000511816 CRIPAKQ8N1N5 446 aa7.25□□□□□ -1.25
CALCOCO2-220ENST00000511816 SMCPP49901 116 aaPredicted RBP7.24□□□□□ -1.25
CALCOCO2-220ENST00000511816 RAB15P59190 212 aa7.24□□□□□ -1.25
CALCOCO2-220ENST00000511816 PLEKHM2Q8IWE5 1019 aa7.24□□□□□ -1.25
CALCOCO2-220ENST00000511816 PLPP7Q8NBV4 271 aa7.24□□□□□ -1.25
CALCOCO2-220ENST00000511816 USP17L5A8MUK1 530 aa7.23□□□□□ -1.25
CALCOCO2-220ENST00000511816 ATP5J2-PTCD1G3V325 749 aa7.23□□□□□ -1.25
CALCOCO2-220ENST00000511816 ZIC2O95409 532 aaPredicted RBP7.23□□□□□ -1.25
CALCOCO2-220ENST00000511816 GRM5P41594 1212 aa7.23□□□□□ -1.25
CALCOCO2-220ENST00000511816 DOLKQ9UPQ8 538 aa7.23□□□□□ -1.25
CALCOCO2-220ENST00000511816 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 USP17L3A6NCW0 530 aa7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 USP17L4A6NCW7 530 aa7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 ATP1A2P50993 1020 aa7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 USP4Q13107 963 aa7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 LARP1Q6PKG0 1096 aaKnown RBP7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 USP17L2Q6R6M4 530 aa7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 USP17L1Q7RTZ2 530 aa7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 TRIM50Q86XT4 487 aa7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 PHTF2Q8N3S3 785 aa7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 AAASQ9NRG9 546 aa7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 RBM19Q9Y4C8 960 aaKnown RBP7.22□□□□□ -1.25
CALCOCO2-220ENST00000511816 PIK3CDO00329 1044 aa7.21□□□□□ -1.26
CALCOCO2-220ENST00000511816 ST8SIA5O15466 376 aa7.21□□□□□ -1.26
CALCOCO2-220ENST00000511816 GIGYF1O75420 1035 aaPredicted RBP7.21□□□□□ -1.26
CALCOCO2-220ENST00000511816 SCARF1Q14162 830 aa7.21□□□□□ -1.26
CALCOCO2-220ENST00000511816 INTS6LQ5JSJ4 861 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms