RNA–Protein interactions for RNA: ENST00000511270.1

PROM1-212, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-212ENST00000511270 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
PROM1-212ENST00000511270 HELBQ8NG08 1087 aaPredicted RBP8.33□□□□□ -1.08
PROM1-212ENST00000511270 SYMPKQ92797 1274 aaKnown RBP8.33□□□□□ -1.08
PROM1-212ENST00000511270 UACAQ9BZF9 1416 aa8.32□□□□□ -1.08
PROM1-212ENST00000511270 CFAP99D6REC4 459 aa8.32□□□□□ -1.08
PROM1-212ENST00000511270 PRR7Q8TB68 274 aa8.32□□□□□ -1.08
PROM1-212ENST00000511270 ZNF516Q92618 1163 aa8.32□□□□□ -1.08
PROM1-212ENST00000511270 CDK11AQ9UQ88 783 aaPredicted RBP8.32□□□□□ -1.08
PROM1-212ENST00000511270 ABCC10Q5T3U5 1492 aa8.32□□□□□ -1.08
PROM1-212ENST00000511270 GCC2Q8IWJ2 1684 aa8.31□□□□□ -1.08
PROM1-212ENST00000511270 ABCC2Q92887 1545 aa8.31□□□□□ -1.08
PROM1-212ENST00000511270 MMP16P51512 607 aa8.31□□□□□ -1.08
PROM1-212ENST00000511270 DNMT1P26358 1616 aaKnown RBP8.31□□□□□ -1.08
PROM1-212ENST00000511270 GPATCH8Q9UKJ3 1502 aaKnown RBP8.3□□□□□ -1.08
PROM1-212ENST00000511270 CDC42BPBQ9Y5S2 1711 aa8.3□□□□□ -1.08
PROM1-212ENST00000511270 TLL1O43897 1013 aa8.3□□□□□ -1.08
PROM1-212ENST00000511270 DXOO77932 396 aaKnown RBP8.3□□□□□ -1.08
PROM1-212ENST00000511270 JUNDP17535 347 aa8.3□□□□□ -1.08
PROM1-212ENST00000511270 FLIIQ13045 1269 aa8.3□□□□□ -1.08
PROM1-212ENST00000511270 FAM160A2Q8N612 972 aaPredicted RBP8.3□□□□□ -1.08
PROM1-212ENST00000511270 ZCCHC11Q5TAX3 1644 aaKnown RBP8.29□□□□□ -1.08
PROM1-212ENST00000511270 MAPKBP1O60336 1514 aa8.29□□□□□ -1.08
PROM1-212ENST00000511270 NAIPQ13075 1403 aa8.29□□□□□ -1.08
PROM1-212ENST00000511270 CLSPNQ9HAW4 1339 aa8.29□□□□□ -1.08
PROM1-212ENST00000511270 CROCC2H7BZ55 1655 aa8.28□□□□□ -1.08
PROM1-212ENST00000511270 UHRF1BP1LA0JNW5 1464 aa8.28□□□□□ -1.08
PROM1-212ENST00000511270 PLEKHD1A6NEE1 506 aa8.28□□□□□ -1.08
PROM1-212ENST00000511270 SLC6A16Q9GZN6 736 aa8.28□□□□□ -1.08
PROM1-212ENST00000511270 KDM6BO15054 1643 aa8.28□□□□□ -1.08
PROM1-212ENST00000511270 HFM1A2PYH4 1435 aa8.28□□□□□ -1.08
PROM1-212ENST00000511270 ZNF644Q9H582 1327 aaPredicted RBP8.28□□□□□ -1.08
PROM1-212ENST00000511270 USP17L8P0C7I0 530 aa8.27□□□□□ -1.09
PROM1-212ENST00000511270 MCM6Q14566 821 aa8.27□□□□□ -1.09
PROM1-212ENST00000511270 PTPRNQ16849 979 aa8.27□□□□□ -1.09
PROM1-212ENST00000511270 LYPD8Q6UX82 237 aa8.27□□□□□ -1.09
PROM1-212ENST00000511270 ERICH6Q7L0X2 663 aa8.27□□□□□ -1.09
PROM1-212ENST00000511270 ABCC5O15440 1437 aa8.27□□□□□ -1.09
PROM1-212ENST00000511270 DAPK1P53355 1430 aa8.27□□□□□ -1.09
PROM1-212ENST00000511270 ADGBQ8N7X0 1667 aa8.27□□□□□ -1.09
PROM1-212ENST00000511270 CAMSAP2Q08AD1 1489 aa8.26□□□□□ -1.09
PROM1-212ENST00000511270 PREX2Q70Z35 1606 aa8.26□□□□□ -1.09
PROM1-212ENST00000511270 KDM5BQ9UGL1 1544 aa8.26□□□□□ -1.09
PROM1-212ENST00000511270 APBB1O00213 710 aa8.26□□□□□ -1.09
PROM1-212ENST00000511270 AP1G2O75843 785 aa8.26□□□□□ -1.09
PROM1-212ENST00000511270 NKX2-3Q8TAU0 364 aa8.25□□□□□ -1.09
PROM1-212ENST00000511270 PRDM9Q9NQV7 894 aa8.25□□□□□ -1.09
PROM1-212ENST00000511270 AKNAQ7Z591 1439 aa8.25□□□□□ -1.09
PROM1-212ENST00000511270 TTC37Q6PGP7 1564 aa8.25□□□□□ -1.09
PROM1-212ENST00000511270 MYO5CQ9NQX4 1742 aa8.25□□□□□ -1.09
PROM1-212ENST00000511270 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.24□□□□□ -1.09
PROM1-212ENST00000511270 GGCXP38435 758 aa8.24□□□□□ -1.09
PROM1-212ENST00000511270 CTDSPL2Q05D32 466 aa8.24□□□□□ -1.09
PROM1-212ENST00000511270 CHIC2Q9UKJ5 165 aa8.24□□□□□ -1.09
PROM1-212ENST00000511270 SAMD9LQ8IVG5 1584 aa8.23□□□□□ -1.09
PROM1-212ENST00000511270 S1PR4O95977 384 aa8.23□□□□□ -1.09
PROM1-212ENST00000511270 C14orf37Q86TY3 774 aa8.23□□□□□ -1.09
PROM1-212ENST00000511270 MTMR14Q8NCE2 650 aa8.23□□□□□ -1.09
PROM1-212ENST00000511270 TSC1Q92574 1164 aa8.23□□□□□ -1.09
PROM1-212ENST00000511270 RRP7BPQ9NSQ0 103 aa8.23□□□□□ -1.09
PROM1-212ENST00000511270 CFDP1Q9UEE9 299 aaPredicted RBP8.23□□□□□ -1.09
PROM1-212ENST00000511270 ROCK1Q13464 1354 aa8.22□□□□□ -1.09
PROM1-212ENST00000511270 PER1O15534 1290 aaPredicted RBP8.22□□□□□ -1.09
PROM1-212ENST00000511270 F12P00748 615 aaPredicted RBP8.22□□□□□ -1.09
PROM1-212ENST00000511270 CCNYL3P0C7X3 344 aa8.22□□□□□ -1.09
PROM1-212ENST00000511270 NUDT12Q9BQG2 462 aa8.22□□□□□ -1.09
PROM1-212ENST00000511270 ADGRL2O95490 1459 aa8.21□□□□□ -1.09
PROM1-212ENST00000511270 ANKLE1Q8NAG6 615 aa8.21□□□□□ -1.1
PROM1-212ENST00000511270 SNRKQ9NRH2 765 aa8.21□□□□□ -1.1
PROM1-212ENST00000511270 EVA1BQ9NVM1 165 aa8.21□□□□□ -1.1
PROM1-212ENST00000511270 PLA2G2EQ9NZK7 142 aa8.21□□□□□ -1.1
PROM1-212ENST00000511270 ZNF777Q9ULD5 760 aaPredicted RBP8.21□□□□□ -1.1
PROM1-212ENST00000511270 ARHGEF5Q12774 1597 aa8.21□□□□□ -1.1
PROM1-212ENST00000511270 DENND4BO75064 1496 aaPredicted RBP8.2□□□□□ -1.1
PROM1-212ENST00000511270 LRRN4Q8WUT4 740 aa8.2□□□□□ -1.1
PROM1-212ENST00000511270 GJD4Q96KN9 370 aaPredicted RBP8.2□□□□□ -1.1
PROM1-212ENST00000511270 MBD5Q9P267 1494 aa8.19□□□□□ -1.1
PROM1-212ENST00000511270 PPP1R18Q6NYC8 613 aa8.19□□□□□ -1.1
PROM1-212ENST00000511270 ARXQ96QS3 562 aa8.19□□□□□ -1.1
PROM1-212ENST00000511270 SIN3AQ96ST3 1273 aa8.19□□□□□ -1.1
PROM1-212ENST00000511270 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
PROM1-212ENST00000511270 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.19□□□□□ -1.1
PROM1-212ENST00000511270 NCOA1Q15788 1441 aa8.19□□□□□ -1.1
PROM1-212ENST00000511270 RNF223E7ERA6 249 aa8.18□□□□□ -1.1
PROM1-212ENST00000511270 KCNH2Q12809 1159 aa8.18□□□□□ -1.1
PROM1-212ENST00000511270 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
PROM1-212ENST00000511270 PRM3Q9NNZ6 103 aa8.18□□□□□ -1.1
PROM1-212ENST00000511270 FCF1Q9Y324 198 aaKnown RBP8.18□□□□□ -1.1
PROM1-212ENST00000511270 SHANK2Q9UPX8 1470 aa8.18□□□□□ -1.1
PROM1-212ENST00000511270 HNRNPMP52272 730 aaKnown RBP eCLIP8.17□□□□□ -1.1
PROM1-212ENST00000511270 NDUFB9Q9Y6M9 179 aa8.17□□□□□ -1.1
PROM1-212ENST00000511270 ZC3H4Q9UPT8 1303 aaKnown RBP8.17□□□□□ -1.1
PROM1-212ENST00000511270 ARHGAP5Q13017 1502 aa8.17□□□□□ -1.1
PROM1-212ENST00000511270 MAST1Q9Y2H9 1570 aa8.17□□□□□ -1.1
PROM1-212ENST00000511270 ABCA9Q8IUA7 1624 aa8.17□□□□□ -1.1
PROM1-212ENST00000511270 A0A0G2JS52 829 aa8.16□□□□□ -1.1
PROM1-212ENST00000511270 PLCH2O75038 1416 aa8.16□□□□□ -1.1
PROM1-212ENST00000511270 PNMA1Q8ND90 353 aa8.16□□□□□ -1.1
PROM1-212ENST00000511270 SYCP2Q9BX26 1530 aa8.16□□□□□ -1.1
PROM1-212ENST00000511270 ARHGEF12Q9NZN5 1544 aa8.16□□□□□ -1.1
PROM1-212ENST00000511270 CCDC141Q6ZP82 1450 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms