RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 NBPF14Q5TI25 921 aa8.62□□□□□ -1.03
HMGB3P13-201ENST00000511263 ZC3H4Q9UPT8 1303 aaKnown RBP8.61□□□□□ -1.03
HMGB3P13-201ENST00000511263 VSIG8P0DPA2 414 aa8.61□□□□□ -1.03
HMGB3P13-201ENST00000511263 AGERQ15109 404 aa8.6□□□□□ -1.03
HMGB3P13-201ENST00000511263 MAN1A2O60476 641 aa8.59□□□□□ -1.03
HMGB3P13-201ENST00000511263 NR5A1Q13285 461 aa8.58□□□□□ -1.04
HMGB3P13-201ENST00000511263 PPFIA3O75145 1194 aa8.57□□□□□ -1.04
HMGB3P13-201ENST00000511263 BMP2P12643 396 aa8.57□□□□□ -1.04
HMGB3P13-201ENST00000511263 BPHLQ86WA6 291 aaPredicted RBP8.57□□□□□ -1.04
HMGB3P13-201ENST00000511263 WWC1Q8IX03 1113 aa8.57□□□□□ -1.04
HMGB3P13-201ENST00000511263 MEIOBQ8N635 442 aa8.57□□□□□ -1.04
HMGB3P13-201ENST00000511263 ZNF592Q92610 1267 aa8.57□□□□□ -1.04
HMGB3P13-201ENST00000511263 LINC00528Q8N1L1 170 aa8.56□□□□□ -1.04
HMGB3P13-201ENST00000511263 LRRN4Q8WUT4 740 aa8.56□□□□□ -1.04
HMGB3P13-201ENST00000511263 C1QTNF2Q9BXJ5 285 aa8.56□□□□□ -1.04
HMGB3P13-201ENST00000511263 DNMT3LQ9UJW3 386 aa8.56□□□□□ -1.04
HMGB3P13-201ENST00000511263 FSHRP23945 695 aa8.55□□□□□ -1.04
HMGB3P13-201ENST00000511263 SH3RF1Q7Z6J0 888 aa8.55□□□□□ -1.04
HMGB3P13-201ENST00000511263 FKBPLQ9UIM3 349 aa8.55□□□□□ -1.04
HMGB3P13-201ENST00000511263 NDUFB9Q9Y6M9 179 aa8.55□□□□□ -1.04
HMGB3P13-201ENST00000511263 ZNF330Q9Y3S2 320 aaPredicted RBP8.54□□□□□ -1.04
HMGB3P13-201ENST00000511263 GPSM3Q9Y4H4 160 aa8.54□□□□□ -1.04
HMGB3P13-201ENST00000511263 SOS2Q07890 1332 aaPredicted RBP8.54□□□□□ -1.04
HMGB3P13-201ENST00000511263 RAD21O60216 631 aa8.53□□□□□ -1.04
HMGB3P13-201ENST00000511263 PTK2Q05397 1052 aa8.53□□□□□ -1.04
HMGB3P13-201ENST00000511263 NR6A1Q15406 480 aa8.53□□□□□ -1.04
HMGB3P13-201ENST00000511263 PDXDC2PQ6P474 469 aa8.53□□□□□ -1.04
HMGB3P13-201ENST00000511263 SH3BP5LQ7L8J4 393 aa8.53□□□□□ -1.04
HMGB3P13-201ENST00000511263 FBXO31Q5XUX0 539 aaPredicted RBP8.52□□□□□ -1.05
HMGB3P13-201ENST00000511263 TRIM52Q96A61 297 aa8.52□□□□□ -1.05
HMGB3P13-201ENST00000511263 MAGEB6P1A0A0J9YX57 407 aa8.51□□□□□ -1.05
HMGB3P13-201ENST00000511263 UPP2O95045 317 aa8.51□□□□□ -1.05
HMGB3P13-201ENST00000511263 KRT76Q01546 638 aa8.51□□□□□ -1.05
HMGB3P13-201ENST00000511263 VASH1Q7L8A9 365 aaPredicted RBP8.51□□□□□ -1.05
HMGB3P13-201ENST00000511263 GPR161Q8N6U8 529 aaKnown RBP8.51□□□□□ -1.05
HMGB3P13-201ENST00000511263 GSK3AP49840 483 aa8.5□□□□□ -1.05
HMGB3P13-201ENST00000511263 CARD14Q9BXL6 1004 aa8.5□□□□□ -1.05
HMGB3P13-201ENST00000511263 MAP4K5Q9Y4K4 846 aa8.5□□□□□ -1.05
HMGB3P13-201ENST00000511263 LOC100996750A0A140TA64 210 aa8.49□□□□□ -1.05
HMGB3P13-201ENST00000511263 UBTFP17480 764 aaKnown RBP8.49□□□□□ -1.05
HMGB3P13-201ENST00000511263 ERICH6Q7L0X2 663 aa8.49□□□□□ -1.05
HMGB3P13-201ENST00000511263 ZBTB33Q86T24 672 aa8.49□□□□□ -1.05
HMGB3P13-201ENST00000511263 TRMT44Q8IYL2 757 aaKnown RBP8.49□□□□□ -1.05
HMGB3P13-201ENST00000511263 MTMR14Q8NCE2 650 aa8.49□□□□□ -1.05
HMGB3P13-201ENST00000511263 ARHGAP9Q9BRR9 750 aa8.49□□□□□ -1.05
HMGB3P13-201ENST00000511263 KRTAP4-6Q9BYQ5 205 aa8.49□□□□□ -1.05
HMGB3P13-201ENST00000511263 CDV3Q9UKY7 258 aaKnown RBP8.49□□□□□ -1.05
HMGB3P13-201ENST00000511263 MCCD1P59942 119 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P13-201ENST00000511263 CBLBQ13191 982 aa8.48□□□□□ -1.05
HMGB3P13-201ENST00000511263 MCM6Q14566 821 aa8.48□□□□□ -1.05
HMGB3P13-201ENST00000511263 CCDC116Q8IYX3 515 aa8.48□□□□□ -1.05
HMGB3P13-201ENST00000511263 HMX1Q9NP08 348 aaPredicted RBP8.48□□□□□ -1.05
HMGB3P13-201ENST00000511263 SNRKQ9NRH2 765 aa8.48□□□□□ -1.05
HMGB3P13-201ENST00000511263 FIGNL2A6NMB9 653 aa8.47□□□□□ -1.05
HMGB3P13-201ENST00000511263 TSEN34Q9BSV6 310 aaKnown RBP8.47□□□□□ -1.05
HMGB3P13-201ENST00000511263 EMILIN1Q9Y6C2 1016 aa8.47□□□□□ -1.05
HMGB3P13-201ENST00000511263 TTLL8A6PVC2 850 aa8.46□□□□□ -1.06
HMGB3P13-201ENST00000511263 PTSQ03393 145 aa8.46□□□□□ -1.06
HMGB3P13-201ENST00000511263 WASHC4Q2M389 1173 aa8.46□□□□□ -1.06
HMGB3P13-201ENST00000511263 ERFEQ4G0M1 354 aa8.46□□□□□ -1.06
HMGB3P13-201ENST00000511263 PPP1R26Q5T8A7 1209 aaPredicted RBP8.46□□□□□ -1.06
HMGB3P13-201ENST00000511263 GJD4Q96KN9 370 aaPredicted RBP8.46□□□□□ -1.06
HMGB3P13-201ENST00000511263 CNTNAP3BQ96NU0 1288 aa8.46□□□□□ -1.06
HMGB3P13-201ENST00000511263 TRIM34Q9BYJ4 488 aa8.46□□□□□ -1.06
HMGB3P13-201ENST00000511263 CNTNAP3Q9BZ76 1288 aa8.46□□□□□ -1.06
HMGB3P13-201ENST00000511263 ZBBXA8MT70 800 aa8.45□□□□□ -1.06
HMGB3P13-201ENST00000511263 GTF3C3Q9Y5Q9 886 aa8.45□□□□□ -1.06
HMGB3P13-201ENST00000511263 KCNMA1Q12791 1236 aa8.44□□□□□ -1.06
HMGB3P13-201ENST00000511263 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.44□□□□□ -1.06
HMGB3P13-201ENST00000511263 KCTD17Q8N5Z5 321 aa8.44□□□□□ -1.06
HMGB3P13-201ENST00000511263 SLC10A4Q96EP9 437 aa8.44□□□□□ -1.06
HMGB3P13-201ENST00000511263 NBPF20Q3BBV1 942 aa8.43□□□□□ -1.06
HMGB3P13-201ENST00000511263 EIF4G2P78344 907 aaKnown RBP eCLIP8.42□□□□□ -1.06
HMGB3P13-201ENST00000511263 NR1H3Q13133 447 aa8.42□□□□□ -1.06
HMGB3P13-201ENST00000511263 RNFT1Q5M7Z0 435 aa8.42□□□□□ -1.06
HMGB3P13-201ENST00000511263 Q6ZVU0 165 aa8.42□□□□□ -1.06
HMGB3P13-201ENST00000511263 CCDC125Q86Z20 511 aa8.42□□□□□ -1.06
HMGB3P13-201ENST00000511263 EPS8L1Q8TE68 723 aa8.42□□□□□ -1.06
HMGB3P13-201ENST00000511263 AGBL1Q96MI9 1066 aa8.42□□□□□ -1.06
HMGB3P13-201ENST00000511263 COL25A1Q9BXS0 654 aaPredicted RBP8.42□□□□□ -1.06
HMGB3P13-201ENST00000511263 SPINT1O43278 529 aa8.41□□□□□ -1.06
HMGB3P13-201ENST00000511263 ABL2P42684 1182 aa8.41□□□□□ -1.06
HMGB3P13-201ENST00000511263 DZIP3Q86Y13 1208 aaKnown RBP8.41□□□□□ -1.06
HMGB3P13-201ENST00000511263 CCDC155Q8N6L0 562 aa8.41□□□□□ -1.06
HMGB3P13-201ENST00000511263 SOX11P35716 441 aa8.4□□□□□ -1.06
HMGB3P13-201ENST00000511263 KCTD15Q96SI1 283 aaPredicted RBP8.4□□□□□ -1.06
HMGB3P13-201ENST00000511263 OCSTAMPQ9BR26 566 aa8.4□□□□□ -1.06
HMGB3P13-201ENST00000511263 ADAMTS8Q9UP79 889 aa8.4□□□□□ -1.06
HMGB3P13-201ENST00000511263 TBC1D2BQ9UPU7 963 aa8.4□□□□□ -1.06
HMGB3P13-201ENST00000511263 CTSOP43234 321 aaPredicted RBP8.39□□□□□ -1.07
HMGB3P13-201ENST00000511263 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
HMGB3P13-201ENST00000511263 ADAM32Q8TC27 787 aa8.39□□□□□ -1.07
HMGB3P13-201ENST00000511263 WHAMMQ8TF30 809 aa8.39□□□□□ -1.07
HMGB3P13-201ENST00000511263 NANOS1Q8WY41 292 aaKnown RBP8.39□□□□□ -1.07
HMGB3P13-201ENST00000511263 GDPD2Q9HCC8 539 aa8.39□□□□□ -1.07
HMGB3P13-201ENST00000511263 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
HMGB3P13-201ENST00000511263 SLC35F4A4IF30 521 aa8.38□□□□□ -1.07
HMGB3P13-201ENST00000511263 RELBQ01201 579 aa8.38□□□□□ -1.07
HMGB3P13-201ENST00000511263 DHX9Q08211 1270 aaKnown RBP8.38□□□□□ -1.07
HMGB3P13-201ENST00000511263 INTS6LQ5JSJ4 861 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms