RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, humanhuman

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-223ENST00000511081 USP54Q70EL1 1684 aa17.08■□□□□ 0.32
CLDND1-223ENST00000511081 EDC4Q6P2E9 1401 aaKnown RBP17.08■□□□□ 0.32
CLDND1-223ENST00000511081 USP47Q96K76 1375 aa17.08■□□□□ 0.32
CLDND1-223ENST00000511081 TCP11L2Q8N4U5 519 aa17.08■□□□□ 0.32
CLDND1-223ENST00000511081 ZRANB1Q9UGI0 708 aa17.08■□□□□ 0.32
CLDND1-223ENST00000511081 NFAT5O94916 1531 aa17.07■□□□□ 0.32
CLDND1-223ENST00000511081 A0A1W2PP64 1363 aa17.07■□□□□ 0.32
CLDND1-223ENST00000511081 A0A0G2JS52 829 aa17.07■□□□□ 0.32
CLDND1-223ENST00000511081 MYT1Q01538 1121 aa17.07■□□□□ 0.32
CLDND1-223ENST00000511081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
CLDND1-223ENST00000511081 NME9Q86XW9 330 aa17.06■□□□□ 0.32
CLDND1-223ENST00000511081 CRB1P82279 1406 aa17.05■□□□□ 0.32
CLDND1-223ENST00000511081 TMF1P82094 1093 aa17.05■□□□□ 0.32
CLDND1-223ENST00000511081 USP35Q9P2H5 1018 aa17.05■□□□□ 0.32
CLDND1-223ENST00000511081 WDR17Q8IZU2 1322 aa17.04■□□□□ 0.32
CLDND1-223ENST00000511081 FAM182BQ5T319 152 aa17.04■□□□□ 0.32
CLDND1-223ENST00000511081 DEFB132Q7Z7B7 95 aa17.04■□□□□ 0.32
CLDND1-223ENST00000511081 FAM196AQ6ZSG2 479 aa17.03■□□□□ 0.32
CLDND1-223ENST00000511081 ABCC6O95255 1503 aa17.02■□□□□ 0.32
CLDND1-223ENST00000511081 SF3B2Q13435 895 aaKnown RBP17.02■□□□□ 0.32
CLDND1-223ENST00000511081 ZBTB7CA1YPR0 619 aa17.01■□□□□ 0.31
CLDND1-223ENST00000511081 CDCA8Q53HL2 280 aa17.01■□□□□ 0.31
CLDND1-223ENST00000511081 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
CLDND1-223ENST00000511081 RGPD5Q99666 1765 aa17.01■□□□□ 0.31
CLDND1-223ENST00000511081 OVOS2A0A0J9YW53 1432 aa17.01■□□□□ 0.31
CLDND1-223ENST00000511081 OVOS2Q6IE36 1432 aa17.01■□□□□ 0.31
CLDND1-223ENST00000511081 PDE3BQ13370 1112 aa17■□□□□ 0.31
CLDND1-223ENST00000511081 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
CLDND1-223ENST00000511081 ANKRD36BQ8N2N9 1353 aa17■□□□□ 0.31
CLDND1-223ENST00000511081 PARP4Q9UKK3 1724 aaKnown RBP16.99■□□□□ 0.31
CLDND1-223ENST00000511081 DISP2A7MBM2 1401 aa16.99■□□□□ 0.31
CLDND1-223ENST00000511081 SOX12O15370 315 aa16.99■□□□□ 0.31
CLDND1-223ENST00000511081 BAG6P46379 1132 aa16.99■□□□□ 0.31
CLDND1-223ENST00000511081 CCER1Q8TC90 406 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-223ENST00000511081 C11orf95C9JLR9 678 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-223ENST00000511081 CDCA7Q9BWT1 371 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-223ENST00000511081 RGPD1P0DJD0 1748 aa16.97■□□□□ 0.31
CLDND1-223ENST00000511081 FYB1O15117 783 aa16.96■□□□□ 0.31
CLDND1-223ENST00000511081 TRIM37O94972 964 aa16.95■□□□□ 0.3
CLDND1-223ENST00000511081 EN1Q05925 392 aaPredicted RBP16.95■□□□□ 0.3
CLDND1-223ENST00000511081 IP6K1Q92551 441 aa16.95■□□□□ 0.3
CLDND1-223ENST00000511081 COG3Q96JB2 828 aa16.95■□□□□ 0.3
CLDND1-223ENST00000511081 ERBB3P21860 1342 aa16.95■□□□□ 0.3
CLDND1-223ENST00000511081 CCDC7Q96M83 1385 aa16.94■□□□□ 0.3
CLDND1-223ENST00000511081 TNS1Q9HBL0 1735 aaKnown RBP16.94■□□□□ 0.3
CLDND1-223ENST00000511081 DDB1Q16531 1140 aa16.94■□□□□ 0.3
CLDND1-223ENST00000511081 CAMKK2Q96RR4 588 aa16.94■□□□□ 0.3
CLDND1-223ENST00000511081 LTN1O94822 1766 aa16.94■□□□□ 0.3
CLDND1-223ENST00000511081 CSB-PGBD3P0DP91 1061 aa16.93■□□□□ 0.3
CLDND1-223ENST00000511081 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
CLDND1-223ENST00000511081 BCL9O00512 1426 aa16.93■□□□□ 0.3
CLDND1-223ENST00000511081 PEAK1Q9H792 1746 aa16.93■□□□□ 0.3
CLDND1-223ENST00000511081 WNK3Q9BYP7 1800 aa16.91■□□□□ 0.3
CLDND1-223ENST00000511081 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
CLDND1-223ENST00000511081 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
CLDND1-223ENST00000511081 MARCH10Q8NA82 808 aaPredicted RBP16.91■□□□□ 0.3
CLDND1-223ENST00000511081 ANKRD24Q8TF21 1146 aa16.91■□□□□ 0.3
CLDND1-223ENST00000511081 LRRC37A3O60309 1634 aa16.91■□□□□ 0.3
CLDND1-223ENST00000511081 EXOC5O00471 708 aa16.9■□□□□ 0.3
CLDND1-223ENST00000511081 APBA3O96018 575 aa16.9■□□□□ 0.3
CLDND1-223ENST00000511081 FBLN1P23142 703 aa16.9■□□□□ 0.3
CLDND1-223ENST00000511081 MAP3K19Q56UN5 1328 aa16.9■□□□□ 0.3
CLDND1-223ENST00000511081 PARD3Q8TEW0 1356 aa16.89■□□□□ 0.3
CLDND1-223ENST00000511081 OVOS2A0A0G2JMS6 1433 aa16.89■□□□□ 0.29
CLDND1-223ENST00000511081 EZH2Q15910 746 aaKnown RBP16.89■□□□□ 0.29
CLDND1-223ENST00000511081 GGNBP2Q9H3C7 697 aa16.89■□□□□ 0.29
CLDND1-223ENST00000511081 SBF2Q86WG5 1849 aa16.89■□□□□ 0.29
CLDND1-223ENST00000511081 MYOM1P52179 1685 aa16.88■□□□□ 0.29
CLDND1-223ENST00000511081 HSPA5P11021 654 aaKnown RBP16.88■□□□□ 0.29
CLDND1-223ENST00000511081 HOXC9P31274 260 aa16.88■□□□□ 0.29
CLDND1-223ENST00000511081 NLRP2Q9NX02 1062 aa16.88■□□□□ 0.29
CLDND1-223ENST00000511081 PLSCR1O15162 318 aa16.87■□□□□ 0.29
CLDND1-223ENST00000511081 BCL11BQ9C0K0 894 aaPredicted RBP16.86■□□□□ 0.29
CLDND1-223ENST00000511081 IL2RBP14784 551 aa16.85■□□□□ 0.29
CLDND1-223ENST00000511081 AMPHP49418 695 aa16.84■□□□□ 0.29
CLDND1-223ENST00000511081 RTL1A6NKG5 1358 aa16.84■□□□□ 0.29
CLDND1-223ENST00000511081 TNS2Q63HR2 1409 aa16.84■□□□□ 0.29
CLDND1-223ENST00000511081 RRS1Q15050 365 aaKnown RBP16.83■□□□□ 0.28
CLDND1-223ENST00000511081 KIF24Q5T7B8 1368 aa16.83■□□□□ 0.28
CLDND1-223ENST00000511081 PTF1AQ7RTS3 328 aa16.83■□□□□ 0.28
CLDND1-223ENST00000511081 KIF20BQ96Q89 1820 aa16.82■□□□□ 0.28
CLDND1-223ENST00000511081 FAM208AQ9UK61 1670 aaKnown RBP16.82■□□□□ 0.28
CLDND1-223ENST00000511081 NSD3Q9BZ95 1437 aa16.82■□□□□ 0.28
CLDND1-223ENST00000511081 RREB1Q92766 1687 aa16.81■□□□□ 0.28
CLDND1-223ENST00000511081 INSRP06213 1382 aa16.8■□□□□ 0.28
CLDND1-223ENST00000511081 CGNL1Q0VF96 1302 aa16.8■□□□□ 0.28
CLDND1-223ENST00000511081 LTV1Q96GA3 475 aaPredicted RBP16.8■□□□□ 0.28
CLDND1-223ENST00000511081 RGPD3A6NKT7 1758 aaPredicted RBP16.79■□□□□ 0.28
CLDND1-223ENST00000511081 RGPD4Q7Z3J3 1758 aa16.79■□□□□ 0.28
CLDND1-223ENST00000511081 PSDA5PKW4 1024 aaPredicted RBP16.79■□□□□ 0.28
CLDND1-223ENST00000511081 R3HDM1Q15032 1099 aaKnown RBP16.79■□□□□ 0.28
CLDND1-223ENST00000511081 HSP90AB2PQ58FF8 381 aa16.79■□□□□ 0.28
CLDND1-223ENST00000511081 NBPF6Q5VWK0 638 aa16.79■□□□□ 0.28
CLDND1-223ENST00000511081 PROM2Q8N271 834 aa16.79■□□□□ 0.28
CLDND1-223ENST00000511081 NBPF4Q96M43 638 aa16.79■□□□□ 0.28
CLDND1-223ENST00000511081 FLT4P35916 1363 aa16.77■□□□□ 0.28
CLDND1-223ENST00000511081 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.28
CLDND1-223ENST00000511081 NUP188Q5SRE5 1749 aa16.77■□□□□ 0.28
CLDND1-223ENST00000511081 KCNQ2O43526 872 aa16.77■□□□□ 0.28
CLDND1-223ENST00000511081 PANK3Q9H999 370 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms