RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 C1QTNF2Q9BXJ5 285 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 CHIC2Q9UKJ5 165 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 PDZRN3Q9UPQ7 1066 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 MAGEB6P1A0A0J9YX57 407 aa10.22□□□□□ -0.77
CHD1-206ENST00000511067 ZBTB24O43167 697 aaPredicted RBP10.22□□□□□ -0.77
CHD1-206ENST00000511067 AGERQ15109 404 aa10.22□□□□□ -0.77
CHD1-206ENST00000511067 LINC01559Q495D7 138 aa10.22□□□□□ -0.77
CHD1-206ENST00000511067 ERFEQ4G0M1 354 aa10.22□□□□□ -0.77
CHD1-206ENST00000511067 KCTD17Q8N5Z5 321 aa10.22□□□□□ -0.77
CHD1-206ENST00000511067 CARD14Q9BXL6 1004 aa10.22□□□□□ -0.77
CHD1-206ENST00000511067 VRTNQ9H8Y1 702 aa10.22□□□□□ -0.77
CHD1-206ENST00000511067 MAP7D1Q3KQU3 841 aa10.21□□□□□ -0.77
CHD1-206ENST00000511067 SPRYD7Q5W111 196 aa10.21□□□□□ -0.77
CHD1-206ENST00000511067 TRMT44Q8IYL2 757 aaKnown RBP10.21□□□□□ -0.77
CHD1-206ENST00000511067 FOXJ1Q92949 421 aa10.21□□□□□ -0.77
CHD1-206ENST00000511067 EMID1Q96A84 441 aaPredicted RBP10.21□□□□□ -0.77
CHD1-206ENST00000511067 CDV3Q9UKY7 258 aaKnown RBP10.21□□□□□ -0.77
CHD1-206ENST00000511067 ELOAQ14241 798 aaKnown RBP10.2□□□□□ -0.78
CHD1-206ENST00000511067 KANK4Q5T7N3 995 aaPredicted RBP10.2□□□□□ -0.78
CHD1-206ENST00000511067 LIAT1Q6ZQX7 453 aa10.2□□□□□ -0.78
CHD1-206ENST00000511067 PLPP7Q8NBV4 271 aa10.2□□□□□ -0.78
CHD1-206ENST00000511067 SLC10A4Q96EP9 437 aa10.2□□□□□ -0.78
CHD1-206ENST00000511067 ZBTB7CA1YPR0 619 aa10.19□□□□□ -0.78
CHD1-206ENST00000511067 WNT7BP56706 349 aa10.19□□□□□ -0.78
CHD1-206ENST00000511067 SH3BP2P78314 561 aa10.19□□□□□ -0.78
CHD1-206ENST00000511067 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
CHD1-206ENST00000511067 TRIM32Q13049 653 aa10.19□□□□□ -0.78
CHD1-206ENST00000511067 NBPF20Q3BBV1 942 aa10.19□□□□□ -0.78
CHD1-206ENST00000511067 C4orf48Q5BLP8 95 aa10.19□□□□□ -0.78
CHD1-206ENST00000511067 ZNF598Q86UK7 904 aaKnown RBP10.19□□□□□ -0.78
CHD1-206ENST00000511067 CCDC125Q86Z20 511 aa10.19□□□□□ -0.78
CHD1-206ENST00000511067 RPIAP49247 311 aa10.18□□□□□ -0.78
CHD1-206ENST00000511067 PLA2G2CQ5R387 149 aa10.18□□□□□ -0.78
CHD1-206ENST00000511067 RNF20Q5VTR2 975 aa10.18□□□□□ -0.78
CHD1-206ENST00000511067 ZNF697Q5TEC3 545 aa10.17□□□□□ -0.78
CHD1-206ENST00000511067 SEPT12Q8IYM1 358 aa10.17□□□□□ -0.78
CHD1-206ENST00000511067 FAM196BA6NMK8 535 aa10.16□□□□□ -0.78
CHD1-206ENST00000511067 ATP5J2-PTCD1G3V325 749 aa10.16□□□□□ -0.78
CHD1-206ENST00000511067 NCOA4Q13772 614 aa10.16□□□□□ -0.78
CHD1-206ENST00000511067 TRAF7Q6Q0C0 670 aa10.16□□□□□ -0.78
CHD1-206ENST00000511067 ESPNB1AK53 854 aa10.15□□□□□ -0.78
CHD1-206ENST00000511067 VARSP26640 1264 aaKnown RBP10.15□□□□□ -0.78
CHD1-206ENST00000511067 EML3Q32P44 896 aa10.15□□□□□ -0.78
CHD1-206ENST00000511067 CDCA8Q53HL2 280 aa10.15□□□□□ -0.78
CHD1-206ENST00000511067 DEPDC4Q8N2C3 294 aa10.14□□□□□ -0.79
CHD1-206ENST00000511067 MKRN1Q9UHC7 482 aaKnown RBP10.14□□□□□ -0.79
CHD1-206ENST00000511067 DOLKQ9UPQ8 538 aa10.14□□□□□ -0.79
CHD1-206ENST00000511067 MAP4K5Q9Y4K4 846 aa10.14□□□□□ -0.79
CHD1-206ENST00000511067 PATL2C9JE40 543 aaKnown RBP10.13□□□□□ -0.79
CHD1-206ENST00000511067 GIGYF1O75420 1035 aaPredicted RBP10.13□□□□□ -0.79
CHD1-206ENST00000511067 TRIM67Q6ZTA4 783 aa10.13□□□□□ -0.79
CHD1-206ENST00000511067 PODXL2Q9NZ53 605 aa10.13□□□□□ -0.79
CHD1-206ENST00000511067 TMEM88BA6NKF7 163 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L15C9J2P7 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L10C9JJH3 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L13C9JLJ4 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L12C9JPN9 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L11C9JVI0 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L21D6R901 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L18D6R9N7 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L22D6RA61 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L17D6RBQ6 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L19D6RCP7 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L20D6RJB6 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 USP17L24Q0WX57 530 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 TRIM50Q86XT4 487 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 CCDC85AQ96PX6 553 aaPredicted RBP10.12□□□□□ -0.79
CHD1-206ENST00000511067 NOD1Q9Y239 953 aa10.12□□□□□ -0.79
CHD1-206ENST00000511067 CD2BP2O95400 341 aaKnown RBP10.11□□□□□ -0.79
CHD1-206ENST00000511067 BRD1O95696 1058 aa10.11□□□□□ -0.79
CHD1-206ENST00000511067 SKOR1P84550 965 aa10.11□□□□□ -0.79
CHD1-206ENST00000511067 PRR20EP86478 221 aa10.11□□□□□ -0.79
CHD1-206ENST00000511067 PRR20CP86479 221 aa10.11□□□□□ -0.79
CHD1-206ENST00000511067 PRR20DP86480 221 aa10.11□□□□□ -0.79
CHD1-206ENST00000511067 PRR20BP86481 221 aa10.11□□□□□ -0.79
CHD1-206ENST00000511067 PRR20AP86496 221 aa10.11□□□□□ -0.79
CHD1-206ENST00000511067 LARP1Q6PKG0 1096 aaKnown RBP10.11□□□□□ -0.79
CHD1-206ENST00000511067 ZMIZ1Q9ULJ6 1067 aa10.11□□□□□ -0.79
CHD1-206ENST00000511067 NOVA2Q9UNW9 492 aaKnown RBP10.11□□□□□ -0.79
CHD1-206ENST00000511067 TNFRSF10AO00220 468 aa10.1□□□□□ -0.79
CHD1-206ENST00000511067 RASA1P20936 1047 aa10.1□□□□□ -0.79
CHD1-206ENST00000511067 ATP1A2P50993 1020 aa10.1□□□□□ -0.79
CHD1-206ENST00000511067 SIRT1Q96EB6 747 aa10.1□□□□□ -0.79
CHD1-206ENST00000511067 PTK7Q13308 1070 aa10.09□□□□□ -0.79
CHD1-206ENST00000511067 CRTC2Q53ET0 693 aaPredicted RBP10.09□□□□□ -0.79
CHD1-206ENST00000511067 KCTD15Q96SI1 283 aaPredicted RBP10.09□□□□□ -0.79
CHD1-206ENST00000511067 GDF9O60383 454 aa10.08□□□□□ -0.8
CHD1-206ENST00000511067 KCNA1Q09470 495 aa10.08□□□□□ -0.8
CHD1-206ENST00000511067 FOXC1Q12948 553 aa10.08□□□□□ -0.8
CHD1-206ENST00000511067 TSGA10IPQ3SY00 556 aa10.08□□□□□ -0.8
CHD1-206ENST00000511067 PKDCCQ504Y2 493 aa10.08□□□□□ -0.8
CHD1-206ENST00000511067 B4GALNT3Q6L9W6 998 aa10.08□□□□□ -0.8
CHD1-206ENST00000511067 AEBP1Q8IUX7 1158 aa10.08□□□□□ -0.8
CHD1-206ENST00000511067 MPNDQ8N594 471 aa10.08□□□□□ -0.8
CHD1-206ENST00000511067 EHBP1Q8NDI1 1231 aa10.08□□□□□ -0.8
CHD1-206ENST00000511067 OXLD1Q5BKU9 147 aa10.07□□□□□ -0.8
CHD1-206ENST00000511067 LARGE2Q8N3Y3 721 aa10.07□□□□□ -0.8
CHD1-206ENST00000511067 OGFOD1Q8N543 542 aa10.07□□□□□ -0.8
CHD1-206ENST00000511067 STK32AQ8WU08 396 aa10.07□□□□□ -0.8
CHD1-206ENST00000511067 TRIM52Q96A61 297 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms