RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SPATA31A1Q5TZJ5 1347 aa19.37■□□□□ 0.69
DDX41-212ENST00000511040 COG3Q96JB2 828 aa19.37■□□□□ 0.69
DDX41-212ENST00000511040 GGNBP2Q9H3C7 697 aa19.37■□□□□ 0.69
DDX41-212ENST00000511040 NSD3Q9BZ95 1437 aa19.36■□□□□ 0.69
DDX41-212ENST00000511040 FYB1O15117 783 aa19.36■□□□□ 0.69
DDX41-212ENST00000511040 ONECUT3O60422 494 aaPredicted RBP19.35■□□□□ 0.69
DDX41-212ENST00000511040 FBLN1P23142 703 aa19.35■□□□□ 0.69
DDX41-212ENST00000511040 UPF1Q92900 1129 aaKnown RBP eCLIP19.35■□□□□ 0.69
DDX41-212ENST00000511040 BRWD3Q6RI45 1802 aa19.35■□□□□ 0.69
DDX41-212ENST00000511040 RGPD5Q99666 1765 aa19.34■□□□□ 0.69
DDX41-212ENST00000511040 KIF20BQ96Q89 1820 aa19.32■□□□□ 0.68
DDX41-212ENST00000511040 LTN1O94822 1766 aa19.32■□□□□ 0.68
DDX41-212ENST00000511040 CSB-PGBD3P0DP91 1061 aa19.32■□□□□ 0.68
DDX41-212ENST00000511040 PANK3Q9H999 370 aa19.32■□□□□ 0.68
DDX41-212ENST00000511040 KIF7Q2M1P5 1343 aa19.31■□□□□ 0.68
DDX41-212ENST00000511040 TOM1L2Q6ZVM7 507 aa19.31■□□□□ 0.68
DDX41-212ENST00000511040 TCP11L2Q8N4U5 519 aa19.31■□□□□ 0.68
DDX41-212ENST00000511040 KRT27Q7Z3Y8 459 aa19.3■□□□□ 0.68
DDX41-212ENST00000511040 CRB1P82279 1406 aa19.3■□□□□ 0.68
DDX41-212ENST00000511040 WDR17Q8IZU2 1322 aa19.29■□□□□ 0.68
DDX41-212ENST00000511040 THSD7AQ9UPZ6 1657 aa19.29■□□□□ 0.68
DDX41-212ENST00000511040 MAP3K19Q56UN5 1328 aa19.28■□□□□ 0.68
DDX41-212ENST00000511040 RRS1Q15050 365 aaKnown RBP19.28■□□□□ 0.68
DDX41-212ENST00000511040 FAM182BQ5T319 152 aa19.28■□□□□ 0.68
DDX41-212ENST00000511040 BARGINQ6ZT62 677 aa19.28■□□□□ 0.68
DDX41-212ENST00000511040 CGNL1Q0VF96 1302 aa19.27■□□□□ 0.68
DDX41-212ENST00000511040 ABCC6O95255 1503 aa19.26■□□□□ 0.67
DDX41-212ENST00000511040 AMPHP49418 695 aa19.26■□□□□ 0.67
DDX41-212ENST00000511040 ANKRD24Q8TF21 1146 aa19.26■□□□□ 0.67
DDX41-212ENST00000511040 LTV1Q96GA3 475 aaPredicted RBP19.26■□□□□ 0.67
DDX41-212ENST00000511040 IP6K1Q92551 441 aa19.25■□□□□ 0.67
DDX41-212ENST00000511040 THRAP3Q9Y2W1 955 aaKnown RBP19.25■□□□□ 0.67
DDX41-212ENST00000511040 CARD10Q9BWT7 1032 aa19.24■□□□□ 0.67
DDX41-212ENST00000511040 NLRP2Q9NX02 1062 aa19.24■□□□□ 0.67
DDX41-212ENST00000511040 ERBB3P21860 1342 aa19.24■□□□□ 0.67
DDX41-212ENST00000511040 HOXC9P31274 260 aa19.23■□□□□ 0.67
DDX41-212ENST00000511040 CCDC7Q96M83 1385 aa19.22■□□□□ 0.67
DDX41-212ENST00000511040 TNNT2P45379 298 aaPredicted RBP19.21■□□□□ 0.67
DDX41-212ENST00000511040 BLMP54132 1417 aaPredicted RBP19.21■□□□□ 0.67
DDX41-212ENST00000511040 WASHC2AQ641Q2 1341 aa19.21■□□□□ 0.67
DDX41-212ENST00000511040 PDE3BQ13370 1112 aa19.2■□□□□ 0.66
DDX41-212ENST00000511040 EP400Q96L91 3159 aa19.2■□□□□ 0.66
DDX41-212ENST00000511040 EMILIN1Q9Y6C2 1016 aa19.19■□□□□ 0.66
DDX41-212ENST00000511040 PEAK1Q9H792 1746 aa19.19■□□□□ 0.66
DDX41-212ENST00000511040 PPM1GO15355 546 aaPredicted RBP19.18■□□□□ 0.66
DDX41-212ENST00000511040 KNSTRNQ9Y448 316 aa19.18■□□□□ 0.66
DDX41-212ENST00000511040 WNK3Q9BYP7 1800 aa19.18■□□□□ 0.66
DDX41-212ENST00000511040 RTL1A6NKG5 1358 aa19.18■□□□□ 0.66
DDX41-212ENST00000511040 PARP4Q9UKK3 1724 aaKnown RBP19.17■□□□□ 0.66
DDX41-212ENST00000511040 HSP90AB2PQ58FF8 381 aa19.17■□□□□ 0.66
DDX41-212ENST00000511040 ANKRD26Q9UPS8 1709 aa19.17■□□□□ 0.66
DDX41-212ENST00000511040 LRRC37A3O60309 1634 aa19.16■□□□□ 0.66
DDX41-212ENST00000511040 DDB1Q16531 1140 aa19.16■□□□□ 0.66
DDX41-212ENST00000511040 DISP2A7MBM2 1401 aa19.16■□□□□ 0.66
DDX41-212ENST00000511040 CCDC125Q86Z20 511 aa19.15■□□□□ 0.66
DDX41-212ENST00000511040 RGPD2P0DJD1 1756 aa19.14■□□□□ 0.66
DDX41-212ENST00000511040 MORC1Q86VD1 984 aa19.14■□□□□ 0.65
DDX41-212ENST00000511040 CDCA7Q9BWT1 371 aaPredicted RBP19.14■□□□□ 0.65
DDX41-212ENST00000511040 FLT4P35916 1363 aa19.14■□□□□ 0.65
DDX41-212ENST00000511040 SF3B2Q13435 895 aaKnown RBP19.13■□□□□ 0.65
DDX41-212ENST00000511040 CNGB1Q14028 1251 aaPredicted RBP19.13■□□□□ 0.65
DDX41-212ENST00000511040 AMER1Q5JTC6 1135 aaPredicted RBP19.13■□□□□ 0.65
DDX41-212ENST00000511040 FAM196AQ6ZSG2 479 aa19.13■□□□□ 0.65
DDX41-212ENST00000511040 DEFB132Q7Z7B7 95 aa19.13■□□□□ 0.65
DDX41-212ENST00000511040 POLKQ9UBT6 870 aa19.13■□□□□ 0.65
DDX41-212ENST00000511040 NSD2O96028 1365 aa19.13■□□□□ 0.65
DDX41-212ENST00000511040 MAP2P11137 1827 aaKnown RBP19.13■□□□□ 0.65
DDX41-212ENST00000511040 INSRP06213 1382 aa19.12■□□□□ 0.65
DDX41-212ENST00000511040 TRIM37O94972 964 aa19.12■□□□□ 0.65
DDX41-212ENST00000511040 IL2RBP14784 551 aa19.12■□□□□ 0.65
DDX41-212ENST00000511040 USHBP1Q8N6Y0 703 aa19.12■□□□□ 0.65
DDX41-212ENST00000511040 FAM208AQ9UK61 1670 aaKnown RBP19.11■□□□□ 0.65
DDX41-212ENST00000511040 EXOC5O00471 708 aa19.11■□□□□ 0.65
DDX41-212ENST00000511040 NBPF6Q5VWK0 638 aa19.11■□□□□ 0.65
DDX41-212ENST00000511040 MARCH10Q8NA82 808 aaPredicted RBP19.11■□□□□ 0.65
DDX41-212ENST00000511040 NBPF4Q96M43 638 aa19.11■□□□□ 0.65
DDX41-212ENST00000511040 SMG6Q86US8 1419 aaKnown RBP19.1■□□□□ 0.65
DDX41-212ENST00000511040 KIF24Q5T7B8 1368 aa19.1■□□□□ 0.65
DDX41-212ENST00000511040 PER1O15534 1290 aaPredicted RBP19.1■□□□□ 0.65
DDX41-212ENST00000511040 CC2D1BQ5T0F9 858 aaKnown RBP19.1■□□□□ 0.65
DDX41-212ENST00000511040 OVOS2A0A0G2JMS6 1433 aa19.08■□□□□ 0.64
DDX41-212ENST00000511040 TNS2Q63HR2 1409 aa19.08■□□□□ 0.64
DDX41-212ENST00000511040 RGPD1P0DJD0 1748 aa19.07■□□□□ 0.64
DDX41-212ENST00000511040 TNS1Q9HBL0 1735 aaKnown RBP19.05■□□□□ 0.64
DDX41-212ENST00000511040 BAG6P46379 1132 aa19.05■□□□□ 0.64
DDX41-212ENST00000511040 MEGF6O75095 1541 aa19.05■□□□□ 0.64
DDX41-212ENST00000511040 APBA3O96018 575 aa19.04■□□□□ 0.64
DDX41-212ENST00000511040 EN1Q05925 392 aaPredicted RBP19.04■□□□□ 0.64
DDX41-212ENST00000511040 PTF1AQ7RTS3 328 aa19.04■□□□□ 0.64
DDX41-212ENST00000511040 EIF4A2Q14240 407 aaKnown RBP19.03■□□□□ 0.64
DDX41-212ENST00000511040 DDX54Q8TDD1 881 aaKnown RBP19.03■□□□□ 0.64
DDX41-212ENST00000511040 RAPGEF4Q8WZA2 1011 aa19.02■□□□□ 0.64
DDX41-212ENST00000511040 EYA1Q99502 592 aa19.02■□□□□ 0.64
DDX41-212ENST00000511040 SBF2Q86WG5 1849 aa19.01■□□□□ 0.63
DDX41-212ENST00000511040 TATP17735 454 aaPredicted RBP19■□□□□ 0.63
DDX41-212ENST00000511040 ZCRB1Q8TBF4 217 aaKnown RBP19■□□□□ 0.63
DDX41-212ENST00000511040 ACSBG1Q96GR2 724 aa19■□□□□ 0.63
DDX41-212ENST00000511040 ZEB1P37275 1124 aaPredicted RBP18.99■□□□□ 0.63
DDX41-212ENST00000511040 MTHFSP49914 203 aa18.99■□□□□ 0.63
DDX41-212ENST00000511040 EZH2Q15910 746 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms