RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 MMRN1Q13201 1228 aa7.31□□□□□ -1.24
SMAD1-208ENST00000510948 MAP7D1Q3KQU3 841 aa7.31□□□□□ -1.24
SMAD1-208ENST00000510948 PLPP7Q8NBV4 271 aa7.31□□□□□ -1.24
SMAD1-208ENST00000510948 ZNF516Q92618 1163 aa7.31□□□□□ -1.24
SMAD1-208ENST00000510948 CHIC2Q9UKJ5 165 aa7.31□□□□□ -1.24
SMAD1-208ENST00000510948 ATP5J2-PTCD1G3V325 749 aa7.3□□□□□ -1.24
SMAD1-208ENST00000510948 PTPN5P54829 565 aa7.3□□□□□ -1.24
SMAD1-208ENST00000510948 NCOA4Q13772 614 aa7.3□□□□□ -1.24
SMAD1-208ENST00000510948 LARP1Q6PKG0 1096 aaKnown RBP7.3□□□□□ -1.24
SMAD1-208ENST00000510948 DZIP3Q86Y13 1208 aaKnown RBP7.3□□□□□ -1.24
SMAD1-208ENST00000510948 ZMIZ1Q9ULJ6 1067 aa7.3□□□□□ -1.24
SMAD1-208ENST00000510948 NOVA2Q9UNW9 492 aaKnown RBP7.3□□□□□ -1.24
SMAD1-208ENST00000510948 FAM196BA6NMK8 535 aa7.29□□□□□ -1.24
SMAD1-208ENST00000510948 RASA1P20936 1047 aa7.29□□□□□ -1.24
SMAD1-208ENST00000510948 MFAP1P55081 439 aaKnown RBP7.29□□□□□ -1.24
SMAD1-208ENST00000510948 TMEM164Q5U3C3 297 aa7.29□□□□□ -1.24
SMAD1-208ENST00000510948 B4GALNT3Q6L9W6 998 aa7.29□□□□□ -1.24
SMAD1-208ENST00000510948 SH3RF1Q7Z6J0 888 aa7.29□□□□□ -1.24
SMAD1-208ENST00000510948 PTK7Q13308 1070 aa7.28□□□□□ -1.24
SMAD1-208ENST00000510948 CRTC2Q53ET0 693 aaPredicted RBP7.28□□□□□ -1.24
SMAD1-208ENST00000510948 BPHLQ86WA6 291 aaPredicted RBP7.28□□□□□ -1.24
SMAD1-208ENST00000510948 STK32AQ8WU08 396 aa7.28□□□□□ -1.24
SMAD1-208ENST00000510948 BAP1Q92560 729 aa7.28□□□□□ -1.24
SMAD1-208ENST00000510948 MAGEB6P1A0A0J9YX57 407 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L15C9J2P7 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L10C9JJH3 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L13C9JLJ4 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L12C9JPN9 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L11C9JVI0 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L21D6R901 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L18D6R9N7 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L22D6RA61 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L17D6RBQ6 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L19D6RCP7 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L20D6RJB6 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 USP17L24Q0WX57 530 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 EML3Q32P44 896 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 TSGA10IPQ3SY00 556 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 TRAF7Q6Q0C0 670 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 FAM200AQ8TCP9 573 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 CDCA7Q9BWT1 371 aaPredicted RBP7.27□□□□□ -1.25
SMAD1-208ENST00000510948 IVNS1ABPQ9Y6Y0 642 aa7.27□□□□□ -1.25
SMAD1-208ENST00000510948 S1PR4O95977 384 aa7.26□□□□□ -1.25
SMAD1-208ENST00000510948 AGERQ15109 404 aa7.26□□□□□ -1.25
SMAD1-208ENST00000510948 RGS22Q8NE09 1264 aa7.26□□□□□ -1.25
SMAD1-208ENST00000510948 CARD14Q9BXL6 1004 aa7.26□□□□□ -1.25
SMAD1-208ENST00000510948 GIGYF1O75420 1035 aaPredicted RBP7.25□□□□□ -1.25
SMAD1-208ENST00000510948 ERFEQ4G0M1 354 aa7.25□□□□□ -1.25
SMAD1-208ENST00000510948 RNF20Q5VTR2 975 aa7.25□□□□□ -1.25
SMAD1-208ENST00000510948 TRIM50Q86XT4 487 aa7.25□□□□□ -1.25
SMAD1-208ENST00000510948 ANKMY2Q8IV38 441 aa7.25□□□□□ -1.25
SMAD1-208ENST00000510948 OGFOD1Q8N543 542 aa7.25□□□□□ -1.25
SMAD1-208ENST00000510948 ZNF511Q8NB15 262 aa7.25□□□□□ -1.25
SMAD1-208ENST00000510948 NKX2-3Q8TAU0 364 aa7.25□□□□□ -1.25
SMAD1-208ENST00000510948 FOXJ1Q92949 421 aa7.25□□□□□ -1.25
SMAD1-208ENST00000510948 GNEQ9Y223 722 aaKnown RBP7.25□□□□□ -1.25
SMAD1-208ENST00000510948 NOD1Q9Y239 953 aa7.25□□□□□ -1.25
SMAD1-208ENST00000510948 FCF1Q9Y324 198 aaKnown RBP7.25□□□□□ -1.25
SMAD1-208ENST00000510948 ATP1A2P50993 1020 aa7.24□□□□□ -1.25
SMAD1-208ENST00000510948 LINC01559Q495D7 138 aa7.24□□□□□ -1.25
SMAD1-208ENST00000510948 C4orf48Q5BLP8 95 aa7.24□□□□□ -1.25
SMAD1-208ENST00000510948 CCDC85AQ96PX6 553 aaPredicted RBP7.24□□□□□ -1.25
SMAD1-208ENST00000510948 DNAAF2Q9NVR5 837 aaKnown RBP7.24□□□□□ -1.25
SMAD1-208ENST00000510948 DOLKQ9UPQ8 538 aa7.24□□□□□ -1.25
SMAD1-208ENST00000510948 MTMR7Q9Y216 660 aa7.24□□□□□ -1.25
SMAD1-208ENST00000510948 BAZ1AQ9NRL2 1556 aaPredicted RBP7.24□□□□□ -1.25
SMAD1-208ENST00000510948 SSFA2P28290 1259 aa7.23□□□□□ -1.25
SMAD1-208ENST00000510948 CLDN10P78369 228 aa7.23□□□□□ -1.25
SMAD1-208ENST00000510948 FAM69CQ0P6D2 419 aa7.23□□□□□ -1.25
SMAD1-208ENST00000510948 LARGE2Q8N3Y3 721 aa7.23□□□□□ -1.25
SMAD1-208ENST00000510948 ZBTB7BO15156 539 aaPredicted RBP7.22□□□□□ -1.25
SMAD1-208ENST00000510948 SH3BP2P78314 561 aa7.22□□□□□ -1.25
SMAD1-208ENST00000510948 DPYDQ12882 1025 aa7.22□□□□□ -1.25
SMAD1-208ENST00000510948 PHLDB3Q6NSJ2 640 aa7.22□□□□□ -1.25
SMAD1-208ENST00000510948 TXNDC2Q86VQ3 553 aa7.22□□□□□ -1.25
SMAD1-208ENST00000510948 CCDC125Q86Z20 511 aa7.22□□□□□ -1.25
SMAD1-208ENST00000510948 CCER1Q8TC90 406 aaPredicted RBP7.22□□□□□ -1.25
SMAD1-208ENST00000510948 CLP1Q92989 425 aaKnown RBP7.22□□□□□ -1.25
SMAD1-208ENST00000510948 SMARCA4P51532 1647 aa7.22□□□□□ -1.25
SMAD1-208ENST00000510948 ARID4AP29374 1257 aaPredicted RBP7.21□□□□□ -1.26
SMAD1-208ENST00000510948 USP4Q13107 963 aa7.21□□□□□ -1.26
SMAD1-208ENST00000510948 NBPF20Q3BBV1 942 aa7.21□□□□□ -1.26
SMAD1-208ENST00000510948 OXLD1Q5BKU9 147 aa7.21□□□□□ -1.26
SMAD1-208ENST00000510948 SND1Q7KZF4 910 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMAD1-208ENST00000510948 SLC10A4Q96EP9 437 aa7.21□□□□□ -1.26
SMAD1-208ENST00000510948 C1QTNF2Q9BXJ5 285 aa7.21□□□□□ -1.26
SMAD1-208ENST00000510948 SLAIN2Q9P270 581 aa7.21□□□□□ -1.26
SMAD1-208ENST00000510948 CECR2Q9BXF3 1484 aa7.2□□□□□ -1.26
SMAD1-208ENST00000510948 ESPNB1AK53 854 aa7.2□□□□□ -1.26
SMAD1-208ENST00000510948 ZBTB24O43167 697 aaPredicted RBP7.2□□□□□ -1.26
SMAD1-208ENST00000510948 SWI5Q1ZZU3 235 aa7.2□□□□□ -1.26
SMAD1-208ENST00000510948 CCDC27Q2M243 656 aa7.2□□□□□ -1.26
SMAD1-208ENST00000510948 TRMT44Q8IYL2 757 aaKnown RBP7.2□□□□□ -1.26
SMAD1-208ENST00000510948 SEPT12Q8IYM1 358 aa7.2□□□□□ -1.26
SMAD1-208ENST00000510948 SIRT1Q96EB6 747 aa7.2□□□□□ -1.26
SMAD1-208ENST00000510948 ZNF594Q96JF6 807 aaPredicted RBP7.2□□□□□ -1.26
SMAD1-208ENST00000510948 CDV3Q9UKY7 258 aaKnown RBP7.2□□□□□ -1.26
SMAD1-208ENST00000510948 PPEF1O14829 653 aaPredicted RBP7.19□□□□□ -1.26
SMAD1-208ENST00000510948 DKK1O94907 266 aa7.19□□□□□ -1.26
SMAD1-208ENST00000510948 GTF2IP78347 998 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms