RNA–Protein interactions for RNA: ENST00000510710.3

COL1A1-212, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,147 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-212ENST00000510710 ROCK2O75116 1388 aaKnown RBP21.36■■□□□ 1.01
COL1A1-212ENST00000510710 PLSCR1O15162 318 aa21.35■■□□□ 1.01
COL1A1-212ENST00000510710 CSB-PGBD3P0DP91 1061 aa21.35■■□□□ 1.01
COL1A1-212ENST00000510710 NEUROD1Q13562 356 aa21.35■■□□□ 1.01
COL1A1-212ENST00000510710 ARHGEF25Q86VW2 580 aa21.35■■□□□ 1.01
COL1A1-212ENST00000510710 CDCA7Q9BWT1 371 aaPredicted RBP21.35■■□□□ 1.01
COL1A1-212ENST00000510710 COL18A1P39060 1754 aa21.35■■□□□ 1.01
COL1A1-212ENST00000510710 KCNQ2O43526 872 aa21.34■■□□□ 1.01
COL1A1-212ENST00000510710 BCL11BQ9C0K0 894 aaPredicted RBP21.34■■□□□ 1.01
COL1A1-212ENST00000510710 PEAK1Q9H792 1746 aa21.34■■□□□ 1.01
COL1A1-212ENST00000510710 LRRC37A3O60309 1634 aa21.33■■□□□ 1.01
COL1A1-212ENST00000510710 TRPM1Q7Z4N2 1603 aa21.33■■□□□ 1.01
COL1A1-212ENST00000510710 CPSF1Q10570 1443 aaKnown RBP21.33■■□□□ 1.01
COL1A1-212ENST00000510710 TTC21AQ8NDW8 1320 aa21.32■■□□□ 1
COL1A1-212ENST00000510710 SBF2Q86WG5 1849 aa21.32■■□□□ 1
COL1A1-212ENST00000510710 MARCH10Q8NA82 808 aaPredicted RBP21.32■■□□□ 1
COL1A1-212ENST00000510710 CARD10Q9BWT7 1032 aa21.31■■□□□ 1
COL1A1-212ENST00000510710 PTF1AQ7RTS3 328 aa21.3■■□□□ 1
COL1A1-212ENST00000510710 KTN1Q86UP2 1357 aaKnown RBP21.3■■□□□ 1
COL1A1-212ENST00000510710 AKAP12Q02952 1782 aa21.3■■□□□ 1
COL1A1-212ENST00000510710 RGPD5Q99666 1765 aa21.29■■□□□ 1
COL1A1-212ENST00000510710 EXOC5O00471 708 aa21.29■■□□□ 1
COL1A1-212ENST00000510710 RGPD3A6NKT7 1758 aaPredicted RBP21.28■■□□□ 1
COL1A1-212ENST00000510710 RGPD4Q7Z3J3 1758 aa21.28■■□□□ 1
COL1A1-212ENST00000510710 DCAF8L1A6NGE4 600 aa21.28■■□□□ 1
COL1A1-212ENST00000510710 WNK3Q9BYP7 1800 aa21.27■■□□□ 1
COL1A1-212ENST00000510710 YY1P25490 414 aa21.27■■□□□ 1
COL1A1-212ENST00000510710 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.26■□□□□ 0.99
COL1A1-212ENST00000510710 PROM2Q8N271 834 aa21.26■□□□□ 0.99
COL1A1-212ENST00000510710 ANO8Q9HCE9 1232 aaPredicted RBP21.26■□□□□ 0.99
COL1A1-212ENST00000510710 BCL9O00512 1426 aa21.26■□□□□ 0.99
COL1A1-212ENST00000510710 CCDC7Q96M83 1385 aa21.24■□□□□ 0.99
COL1A1-212ENST00000510710 NINLQ9Y2I6 1382 aa21.23■□□□□ 0.99
COL1A1-212ENST00000510710 NFAT5O94916 1531 aa21.23■□□□□ 0.99
COL1A1-212ENST00000510710 TXNRD1Q16881 649 aa21.22■□□□□ 0.99
COL1A1-212ENST00000510710 TMC1Q8TDI8 760 aa21.21■□□□□ 0.99
COL1A1-212ENST00000510710 PDGFDQ9GZP0 370 aaPredicted RBP21.21■□□□□ 0.99
COL1A1-212ENST00000510710 STK32BQ9NY57 414 aa21.21■□□□□ 0.99
COL1A1-212ENST00000510710 ZBTB7AO95365 584 aa21.2■□□□□ 0.98
COL1A1-212ENST00000510710 CARD11Q9BXL7 1154 aa21.2■□□□□ 0.98
COL1A1-212ENST00000510710 NLRP2Q9NX02 1062 aa21.2■□□□□ 0.98
COL1A1-212ENST00000510710 HDGFL2Q7Z4V5 671 aaPredicted RBP21.19■□□□□ 0.98
COL1A1-212ENST00000510710 NME9Q86XW9 330 aa21.19■□□□□ 0.98
COL1A1-212ENST00000510710 USP31Q70CQ4 1352 aa21.19■□□□□ 0.98
COL1A1-212ENST00000510710 ABCC6O95255 1503 aa21.19■□□□□ 0.98
COL1A1-212ENST00000510710 MON2Q7Z3U7 1717 aa21.18■□□□□ 0.98
COL1A1-212ENST00000510710 CASZ1Q86V15 1759 aa21.18■□□□□ 0.98
COL1A1-212ENST00000510710 SLC15A2Q16348 729 aa21.17■□□□□ 0.98
COL1A1-212ENST00000510710 ACSBG1Q96GR2 724 aa21.17■□□□□ 0.98
COL1A1-212ENST00000510710 ATF5Q9Y2D1 282 aaPredicted RBP21.17■□□□□ 0.98
COL1A1-212ENST00000510710 ERBB3P21860 1342 aa21.17■□□□□ 0.98
COL1A1-212ENST00000510710 SBNO2Q9Y2G9 1366 aa21.17■□□□□ 0.98
COL1A1-212ENST00000510710 TNS2Q63HR2 1409 aa21.17■□□□□ 0.98
COL1A1-212ENST00000510710 IL2RBP14784 551 aa21.16■□□□□ 0.98
COL1A1-212ENST00000510710 SLC12A5Q9H2X9 1139 aa21.15■□□□□ 0.98
COL1A1-212ENST00000510710 CD163L1Q9NR16 1453 aa21.14■□□□□ 0.98
COL1A1-212ENST00000510710 ANKRD24Q8TF21 1146 aa21.14■□□□□ 0.97
COL1A1-212ENST00000510710 PTGER2P43116 358 aa21.13■□□□□ 0.97
COL1A1-212ENST00000510710 TERF2IPQ9NYB0 399 aa21.13■□□□□ 0.97
COL1A1-212ENST00000510710 LTN1O94822 1766 aa21.13■□□□□ 0.97
COL1A1-212ENST00000510710 USP54Q70EL1 1684 aa21.12■□□□□ 0.97
COL1A1-212ENST00000510710 NHSQ6T4R5 1651 aa21.11■□□□□ 0.97
COL1A1-212ENST00000510710 EDC4Q6P2E9 1401 aaKnown RBP21.11■□□□□ 0.97
COL1A1-212ENST00000510710 MTFR1LQ9H019 292 aa21.1■□□□□ 0.97
COL1A1-212ENST00000510710 MYOM1P52179 1685 aa21.09■□□□□ 0.97
COL1A1-212ENST00000510710 KAT6BQ8WYB5 2073 aa21.08■□□□□ 0.97
COL1A1-212ENST00000510710 FHDC1Q9C0D6 1143 aaPredicted RBP21.08■□□□□ 0.97
COL1A1-212ENST00000510710 A0A1W2PP64 1363 aa21.08■□□□□ 0.96
COL1A1-212ENST00000510710 TONSLQ96HA7 1378 aa21.08■□□□□ 0.96
COL1A1-212ENST00000510710 LTV1Q96GA3 475 aaPredicted RBP21.07■□□□□ 0.96
COL1A1-212ENST00000510710 PUS7Q96PZ0 661 aaKnown RBP21.07■□□□□ 0.96
COL1A1-212ENST00000510710 SYT17Q9BSW7 474 aa21.07■□□□□ 0.96
COL1A1-212ENST00000510710 DDX54Q8TDD1 881 aaKnown RBP21.06■□□□□ 0.96
COL1A1-212ENST00000510710 IP6K1Q92551 441 aa21.06■□□□□ 0.96
COL1A1-212ENST00000510710 BTAF1O14981 1849 aa21.04■□□□□ 0.96
COL1A1-212ENST00000510710 COG3Q96JB2 828 aa21.03■□□□□ 0.96
COL1A1-212ENST00000510710 SGIP1Q9BQI5 828 aa21.03■□□□□ 0.96
COL1A1-212ENST00000510710 ARXQ96QS3 562 aa21.02■□□□□ 0.96
COL1A1-212ENST00000510710 LRRC4BQ9NT99 713 aa21.02■□□□□ 0.96
COL1A1-212ENST00000510710 ZNF827Q17R98 1081 aa21.01■□□□□ 0.95
COL1A1-212ENST00000510710 AMPHP49418 695 aa21■□□□□ 0.95
COL1A1-212ENST00000510710 PAPPAQ13219 1627 aa21■□□□□ 0.95
COL1A1-212ENST00000510710 ST20-MTHFSA0A0A6YYL1 179 aa20.99■□□□□ 0.95
COL1A1-212ENST00000510710 SLC27A3Q5K4L6 730 aa20.99■□□□□ 0.95
COL1A1-212ENST00000510710 SYTL4Q96C24 671 aaPredicted RBP20.99■□□□□ 0.95
COL1A1-212ENST00000510710 SLC24A1O60721 1099 aa20.98■□□□□ 0.95
COL1A1-212ENST00000510710 TESK2Q96S53 571 aa20.98■□□□□ 0.95
COL1A1-212ENST00000510710 MAP3K19Q56UN5 1328 aa20.98■□□□□ 0.95
COL1A1-212ENST00000510710 FAM208AQ9UK61 1670 aaKnown RBP20.97■□□□□ 0.95
COL1A1-212ENST00000510710 FBLN1P23142 703 aa20.97■□□□□ 0.95
COL1A1-212ENST00000510710 HOXC9P31274 260 aa20.97■□□□□ 0.95
COL1A1-212ENST00000510710 AKT1S1Q96B36 256 aa20.97■□□□□ 0.95
COL1A1-212ENST00000510710 PRIM1P49642 420 aaKnown RBP20.96■□□□□ 0.95
COL1A1-212ENST00000510710 ZNF784Q8NCA9 323 aaPredicted RBP20.96■□□□□ 0.95
COL1A1-212ENST00000510710 ZCRB1Q8TBF4 217 aaKnown RBP20.95■□□□□ 0.94
COL1A1-212ENST00000510710 SLC16A10Q8TF71 515 aa20.95■□□□□ 0.94
COL1A1-212ENST00000510710 TFCP2L1Q9NZI6 479 aa20.95■□□□□ 0.94
COL1A1-212ENST00000510710 POLD1P28340 1107 aa20.93■□□□□ 0.94
COL1A1-212ENST00000510710 KCNQ4P56696 695 aa20.93■□□□□ 0.94
COL1A1-212ENST00000510710 KLHL34Q8N239 644 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms