RNA–Protein interactions for RNA: ENST00000510689.5

SPOCK1-209, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 4

Gene SPOCK1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-209ENST00000510689 ZBTB7CA1YPR0 619 aa30.94■■■□□ 2.54
SPOCK1-209ENST00000510689 EDC4Q6P2E9 1401 aaKnown RBP30.94■■■□□ 2.54
SPOCK1-209ENST00000510689 NME9Q86XW9 330 aa30.93■■■□□ 2.54
SPOCK1-209ENST00000510689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.93■■■□□ 2.54
SPOCK1-209ENST00000510689 TMC1Q8TDI8 760 aa30.93■■■□□ 2.54
SPOCK1-209ENST00000510689 WDR17Q8IZU2 1322 aa30.93■■■□□ 2.54
SPOCK1-209ENST00000510689 PEAK1Q9H792 1746 aa30.93■■■□□ 2.54
SPOCK1-209ENST00000510689 LRRC37A3O60309 1634 aa30.91■■■□□ 2.54
SPOCK1-209ENST00000510689 EN1Q05925 392 aaPredicted RBP30.91■■■□□ 2.54
SPOCK1-209ENST00000510689 LTN1O94822 1766 aa30.91■■■□□ 2.54
SPOCK1-209ENST00000510689 HDGFL2Q7Z4V5 671 aaPredicted RBP30.9■■■□□ 2.54
SPOCK1-209ENST00000510689 PDE3BQ13370 1112 aa30.89■■■□□ 2.54
SPOCK1-209ENST00000510689 TERF2IPQ9NYB0 399 aa30.89■■■□□ 2.54
SPOCK1-209ENST00000510689 NINLQ9Y2I6 1382 aa30.89■■■□□ 2.54
SPOCK1-209ENST00000510689 SBF2Q86WG5 1849 aa30.89■■■□□ 2.53
SPOCK1-209ENST00000510689 SOX12O15370 315 aa30.88■■■□□ 2.53
SPOCK1-209ENST00000510689 TRIM37O94972 964 aa30.88■■■□□ 2.53
SPOCK1-209ENST00000510689 OVOS2A0A0J9YW53 1432 aa30.88■■■□□ 2.53
SPOCK1-209ENST00000510689 OVOS2Q6IE36 1432 aa30.88■■■□□ 2.53
SPOCK1-209ENST00000510689 SLC24A1O60721 1099 aa30.87■■■□□ 2.53
SPOCK1-209ENST00000510689 TOM1L2Q6ZVM7 507 aa30.87■■■□□ 2.53
SPOCK1-209ENST00000510689 TIMELESSQ9UNS1 1208 aa30.86■■■□□ 2.53
SPOCK1-209ENST00000510689 CLSPNQ9HAW4 1339 aa30.86■■■□□ 2.53
SPOCK1-209ENST00000510689 USP47Q96K76 1375 aa30.86■■■□□ 2.53
SPOCK1-209ENST00000510689 CAMKK2Q96RR4 588 aa30.85■■■□□ 2.53
SPOCK1-209ENST00000510689 CARD10Q9BWT7 1032 aa30.84■■■□□ 2.53
SPOCK1-209ENST00000510689 RREB1Q92766 1687 aa30.81■■■□□ 2.52
SPOCK1-209ENST00000510689 EZH2Q15910 746 aaKnown RBP30.81■■■□□ 2.52
SPOCK1-209ENST00000510689 CDCA7Q9BWT1 371 aaPredicted RBP30.78■■■□□ 2.52
SPOCK1-209ENST00000510689 OVOS2A0A0G2JMS6 1433 aa30.77■■■□□ 2.52
SPOCK1-209ENST00000510689 APBA3O96018 575 aa30.77■■■□□ 2.52
SPOCK1-209ENST00000510689 DDB1Q16531 1140 aa30.77■■■□□ 2.52
SPOCK1-209ENST00000510689 ANKRD36BQ8N2N9 1353 aa30.77■■■□□ 2.52
SPOCK1-209ENST00000510689 PARD3Q8TEW0 1356 aa30.77■■■□□ 2.52
SPOCK1-209ENST00000510689 ERBB3P21860 1342 aa30.76■■■□□ 2.52
SPOCK1-209ENST00000510689 C11orf95C9JLR9 678 aaPredicted RBP30.76■■■□□ 2.51
SPOCK1-209ENST00000510689 BCL9O00512 1426 aa30.75■■■□□ 2.51
SPOCK1-209ENST00000510689 MARCH10Q8NA82 808 aaPredicted RBP30.75■■■□□ 2.51
SPOCK1-209ENST00000510689 PCGF6Q9BYE7 350 aa30.75■■■□□ 2.51
SPOCK1-209ENST00000510689 CCDC7Q96M83 1385 aa30.75■■■□□ 2.51
SPOCK1-209ENST00000510689 NUP188Q5SRE5 1749 aa30.75■■■□□ 2.51
SPOCK1-209ENST00000510689 LRP5O75197 1615 aa30.74■■■□□ 2.51
SPOCK1-209ENST00000510689 CSB-PGBD3P0DP91 1061 aa30.74■■■□□ 2.51
SPOCK1-209ENST00000510689 TMF1P82094 1093 aa30.74■■■□□ 2.51
SPOCK1-209ENST00000510689 PSDA5PKW4 1024 aaPredicted RBP30.72■■■□□ 2.51
SPOCK1-209ENST00000510689 RGPD3A6NKT7 1758 aaPredicted RBP30.71■■■□□ 2.51
SPOCK1-209ENST00000510689 RGPD4Q7Z3J3 1758 aa30.71■■■□□ 2.51
SPOCK1-209ENST00000510689 MYOM1P52179 1685 aa30.71■■■□□ 2.51
SPOCK1-209ENST00000510689 PTF1AQ7RTS3 328 aa30.68■■■□□ 2.5
SPOCK1-209ENST00000510689 IP6K1Q92551 441 aa30.68■■■□□ 2.5
SPOCK1-209ENST00000510689 ANKRD24Q8TF21 1146 aa30.67■■■□□ 2.5
SPOCK1-209ENST00000510689 TNS2Q63HR2 1409 aa30.66■■■□□ 2.5
SPOCK1-209ENST00000510689 R3HDM1Q15032 1099 aaKnown RBP30.66■■■□□ 2.5
SPOCK1-209ENST00000510689 FAM208AQ9UK61 1670 aaKnown RBP30.65■■■□□ 2.5
SPOCK1-209ENST00000510689 FYB1O15117 783 aa30.65■■■□□ 2.5
SPOCK1-209ENST00000510689 COG3Q96JB2 828 aa30.65■■■□□ 2.5
SPOCK1-209ENST00000510689 EXOC5O00471 708 aa30.64■■■□□ 2.5
SPOCK1-209ENST00000510689 FBLN1P23142 703 aa30.64■■■□□ 2.5
SPOCK1-209ENST00000510689 NLRP2Q9NX02 1062 aa30.64■■■□□ 2.5
SPOCK1-209ENST00000510689 MAP3K19Q56UN5 1328 aa30.64■■■□□ 2.5
SPOCK1-209ENST00000510689 BCL11BQ9C0K0 894 aaPredicted RBP30.63■■■□□ 2.49
SPOCK1-209ENST00000510689 RGPD2P0DJD1 1756 aa30.63■■■□□ 2.49
SPOCK1-209ENST00000510689 KIF20BQ96Q89 1820 aa30.63■■■□□ 2.49
SPOCK1-209ENST00000510689 PLSCR1O15162 318 aa30.62■■■□□ 2.49
SPOCK1-209ENST00000510689 CDCA8Q53HL2 280 aa30.62■■■□□ 2.49
SPOCK1-209ENST00000510689 CARD14Q9BXL6 1004 aa30.59■■■□□ 2.49
SPOCK1-209ENST00000510689 IL2RBP14784 551 aa30.58■■■□□ 2.49
SPOCK1-209ENST00000510689 HOXC9P31274 260 aa30.58■■■□□ 2.49
SPOCK1-209ENST00000510689 GGNBP2Q9H3C7 697 aa30.57■■■□□ 2.48
SPOCK1-209ENST00000510689 NHSQ6T4R5 1651 aa30.56■■■□□ 2.48
SPOCK1-209ENST00000510689 PROM2Q8N271 834 aa30.56■■■□□ 2.48
SPOCK1-209ENST00000510689 KAT6BQ8WYB5 2073 aa30.56■■■□□ 2.48
SPOCK1-209ENST00000510689 RTL1A6NKG5 1358 aa30.53■■■□□ 2.48
SPOCK1-209ENST00000510689 KCNQ2O43526 872 aa30.51■■■□□ 2.47
SPOCK1-209ENST00000510689 RRS1Q15050 365 aaKnown RBP30.51■■■□□ 2.47
SPOCK1-209ENST00000510689 SHANK3Q9BYB0 1731 aa30.5■■■□□ 2.47
SPOCK1-209ENST00000510689 AMPHP49418 695 aa30.5■■■□□ 2.47
SPOCK1-209ENST00000510689 LTV1Q96GA3 475 aaPredicted RBP30.5■■■□□ 2.47
SPOCK1-209ENST00000510689 NBPF14Q5TI25 921 aa30.49■■■□□ 2.47
SPOCK1-209ENST00000510689 NSD3Q9BZ95 1437 aa30.47■■■□□ 2.47
SPOCK1-209ENST00000510689 BTAF1O14981 1849 aa30.47■■■□□ 2.47
SPOCK1-209ENST00000510689 CCER1Q8TC90 406 aaPredicted RBP30.47■■■□□ 2.47
SPOCK1-209ENST00000510689 ANO8Q9HCE9 1232 aaPredicted RBP30.45■■■□□ 2.47
SPOCK1-209ENST00000510689 ANKRD26Q9UPS8 1709 aa30.44■■■□□ 2.46
SPOCK1-209ENST00000510689 KIF24Q5T7B8 1368 aa30.43■■■□□ 2.46
SPOCK1-209ENST00000510689 NBPF6Q5VWK0 638 aa30.43■■■□□ 2.46
SPOCK1-209ENST00000510689 NBPF4Q96M43 638 aa30.43■■■□□ 2.46
SPOCK1-209ENST00000510689 CASZ1Q86V15 1759 aa30.43■■■□□ 2.46
SPOCK1-209ENST00000510689 MAP2P11137 1827 aaKnown RBP30.43■■■□□ 2.46
SPOCK1-209ENST00000510689 MEGF6O75095 1541 aa30.42■■■□□ 2.46
SPOCK1-209ENST00000510689 HSPA5P11021 654 aaKnown RBP30.42■■■□□ 2.46
SPOCK1-209ENST00000510689 TXNRD1Q16881 649 aa30.42■■■□□ 2.46
SPOCK1-209ENST00000510689 ACSBG1Q96GR2 724 aa30.42■■■□□ 2.46
SPOCK1-209ENST00000510689 INSRP06213 1382 aa30.41■■■□□ 2.46
SPOCK1-209ENST00000510689 EIF4G2P78344 907 aaKnown RBP eCLIP30.41■■■□□ 2.46
SPOCK1-209ENST00000510689 HSP90AB2PQ58FF8 381 aa30.4■■■□□ 2.46
SPOCK1-209ENST00000510689 FLT4P35916 1363 aa30.39■■■□□ 2.45
SPOCK1-209ENST00000510689 PAPPAQ13219 1627 aa30.36■■■□□ 2.45
SPOCK1-209ENST00000510689 DDX54Q8TDD1 881 aaKnown RBP30.35■■■□□ 2.45
SPOCK1-209ENST00000510689 EMILIN1Q9Y6C2 1016 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms