RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 SLIT3O75094 1523 aa13.7□□□□□ -0.22
NEK1-205ENST00000510108 SBNO1A3KN83 1393 aa13.7□□□□□ -0.22
NEK1-205ENST00000510108 PHRF1Q9P1Y6 1649 aaKnown RBP13.7□□□□□ -0.22
NEK1-205ENST00000510108 MED1Q15648 1581 aaPredicted RBP13.69□□□□□ -0.22
NEK1-205ENST00000510108 NFAT5O94916 1531 aa13.68□□□□□ -0.22
NEK1-205ENST00000510108 CRYBG1Q9Y4K1 1723 aa13.68□□□□□ -0.22
NEK1-205ENST00000510108 SLAIN2Q9P270 581 aa13.68□□□□□ -0.22
NEK1-205ENST00000510108 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
NEK1-205ENST00000510108 PEAK1Q9H792 1746 aa13.68□□□□□ -0.22
NEK1-205ENST00000510108 NPHP3Q7Z494 1330 aa13.68□□□□□ -0.22
NEK1-205ENST00000510108 SPOCK2Q92563 424 aa13.67□□□□□ -0.22
NEK1-205ENST00000510108 MTHFSP49914 203 aa13.66□□□□□ -0.22
NEK1-205ENST00000510108 BRINP3Q76B58 766 aa13.66□□□□□ -0.22
NEK1-205ENST00000510108 TNS3Q68CZ2 1445 aa13.66□□□□□ -0.22
NEK1-205ENST00000510108 KIF24Q5T7B8 1368 aa13.66□□□□□ -0.22
NEK1-205ENST00000510108 AHDC1Q5TGY3 1603 aaPredicted RBP13.66□□□□□ -0.22
NEK1-205ENST00000510108 USP19O94966 1318 aa13.66□□□□□ -0.22
NEK1-205ENST00000510108 PSME1Q06323 249 aa13.65□□□□□ -0.22
NEK1-205ENST00000510108 FAM9BQ8IZU0 186 aa13.65□□□□□ -0.22
NEK1-205ENST00000510108 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
NEK1-205ENST00000510108 POLKQ9UBT6 870 aa13.65□□□□□ -0.22
NEK1-205ENST00000510108 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
NEK1-205ENST00000510108 FOXO3O43524 673 aa13.64□□□□□ -0.23
NEK1-205ENST00000510108 TNNT2P45379 298 aaPredicted RBP13.64□□□□□ -0.23
NEK1-205ENST00000510108 KRT28Q7Z3Y7 464 aa13.64□□□□□ -0.23
NEK1-205ENST00000510108 FBXO41Q8TF61 875 aa13.64□□□□□ -0.23
NEK1-205ENST00000510108 YTHDC1Q96MU7 727 aaKnown RBP13.64□□□□□ -0.23
NEK1-205ENST00000510108 LTN1O94822 1766 aa13.64□□□□□ -0.23
NEK1-205ENST00000510108 RTL1A6NKG5 1358 aa13.63□□□□□ -0.23
NEK1-205ENST00000510108 SOS2Q07890 1332 aaPredicted RBP13.63□□□□□ -0.23
NEK1-205ENST00000510108 RGPD1P0DJD0 1748 aa13.63□□□□□ -0.23
NEK1-205ENST00000510108 NUBP1P53384 320 aa13.63□□□□□ -0.23
NEK1-205ENST00000510108 ABTB2Q8N961 1025 aa13.63□□□□□ -0.23
NEK1-205ENST00000510108 ABCC6O95255 1503 aa13.62□□□□□ -0.23
NEK1-205ENST00000510108 ABCA3Q99758 1704 aa13.62□□□□□ -0.23
NEK1-205ENST00000510108 NLRP6P59044 892 aa13.62□□□□□ -0.23
NEK1-205ENST00000510108 WDR43Q15061 677 aaKnown RBP eCLIP13.62□□□□□ -0.23
NEK1-205ENST00000510108 EMILIN1Q9Y6C2 1016 aa13.62□□□□□ -0.23
NEK1-205ENST00000510108 ARHGEF10O15013 1369 aa13.61□□□□□ -0.23
NEK1-205ENST00000510108 FLT4P35916 1363 aa13.61□□□□□ -0.23
NEK1-205ENST00000510108 PAK3O75914 559 aaPredicted RBP13.61□□□□□ -0.23
NEK1-205ENST00000510108 SPATA31A3Q5VYP0 1347 aa13.6□□□□□ -0.23
NEK1-205ENST00000510108 ZBED9Q6R2W3 1325 aa13.6□□□□□ -0.23
NEK1-205ENST00000510108 KCNH5Q8NCM2 988 aa13.6□□□□□ -0.23
NEK1-205ENST00000510108 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
NEK1-205ENST00000510108 COL22A1Q8NFW1 1626 aaPredicted RBP13.59□□□□□ -0.23
NEK1-205ENST00000510108 CENPBP07199 599 aaPredicted RBP13.59□□□□□ -0.23
NEK1-205ENST00000510108 HNRNPUQ00839 825 aaKnown RBP eCLIP13.59□□□□□ -0.23
NEK1-205ENST00000510108 RRS1Q15050 365 aaKnown RBP13.59□□□□□ -0.23
NEK1-205ENST00000510108 MAP3K19Q56UN5 1328 aa13.58□□□□□ -0.23
NEK1-205ENST00000510108 DIAPH1O60610 1272 aaKnown RBP13.58□□□□□ -0.24
NEK1-205ENST00000510108 FBLN1P23142 703 aa13.58□□□□□ -0.24
NEK1-205ENST00000510108 XPCQ01831 940 aaPredicted RBP13.58□□□□□ -0.24
NEK1-205ENST00000510108 RASEFQ8IZ41 740 aa13.58□□□□□ -0.24
NEK1-205ENST00000510108 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
NEK1-205ENST00000510108 NUDCQ9Y266 331 aa13.57□□□□□ -0.24
NEK1-205ENST00000510108 COL16A1Q07092 1604 aaPredicted RBP13.57□□□□□ -0.24
NEK1-205ENST00000510108 CAMTA1Q9Y6Y1 1673 aa13.57□□□□□ -0.24
NEK1-205ENST00000510108 IL13P35225 146 aa13.56□□□□□ -0.24
NEK1-205ENST00000510108 COL18A1P39060 1754 aa13.55□□□□□ -0.24
NEK1-205ENST00000510108 NUTM2GQ5VZR2 741 aa13.55□□□□□ -0.24
NEK1-205ENST00000510108 PHLPP1O60346 1717 aa13.54□□□□□ -0.24
NEK1-205ENST00000510108 GCP02774 474 aa13.54□□□□□ -0.24
NEK1-205ENST00000510108 NGEFQ8N5V2 710 aa13.54□□□□□ -0.24
NEK1-205ENST00000510108 CPDO75976 1380 aa13.54□□□□□ -0.24
NEK1-205ENST00000510108 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
NEK1-205ENST00000510108 HOXC9P31274 260 aa13.53□□□□□ -0.24
NEK1-205ENST00000510108 EIF4A2Q14240 407 aaKnown RBP13.53□□□□□ -0.24
NEK1-205ENST00000510108 LMOD2Q6P5Q4 547 aa13.53□□□□□ -0.24
NEK1-205ENST00000510108 ARHGEF25Q86VW2 580 aa13.53□□□□□ -0.24
NEK1-205ENST00000510108 LMO7Q8WWI1 1683 aa13.53□□□□□ -0.24
NEK1-205ENST00000510108 FAM208AQ9UK61 1670 aaKnown RBP13.53□□□□□ -0.24
NEK1-205ENST00000510108 PPM1GO15355 546 aaPredicted RBP13.52□□□□□ -0.25
NEK1-205ENST00000510108 LRRC59Q96AG4 307 aaKnown RBP13.52□□□□□ -0.25
NEK1-205ENST00000510108 RUNDC1Q96C34 613 aa13.52□□□□□ -0.25
NEK1-205ENST00000510108 KDRP35968 1356 aa13.52□□□□□ -0.25
NEK1-205ENST00000510108 NCAPD2Q15021 1401 aa13.52□□□□□ -0.25
NEK1-205ENST00000510108 HAX1O00165 279 aa13.51□□□□□ -0.25
NEK1-205ENST00000510108 U2AF1L5P0DN76 240 aaPredicted RBP13.51□□□□□ -0.25
NEK1-205ENST00000510108 CD44P16070 742 aaKnown RBP13.51□□□□□ -0.25
NEK1-205ENST00000510108 AMPHP49418 695 aa13.51□□□□□ -0.25
NEK1-205ENST00000510108 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
NEK1-205ENST00000510108 U2AF1Q01081 240 aaKnown RBP eCLIP13.51□□□□□ -0.25
NEK1-205ENST00000510108 HSP90AB2PQ58FF8 381 aa13.51□□□□□ -0.25
NEK1-205ENST00000510108 IP6K1Q92551 441 aa13.51□□□□□ -0.25
NEK1-205ENST00000510108 FAM212AQ96EL1 285 aa13.51□□□□□ -0.25
NEK1-205ENST00000510108 PLEKHF1Q96S99 279 aa13.51□□□□□ -0.25
NEK1-205ENST00000510108 FCHSD2O94868 740 aa13.5□□□□□ -0.25
NEK1-205ENST00000510108 RSPH6AQ9H0K4 717 aa13.5□□□□□ -0.25
NEK1-205ENST00000510108 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
NEK1-205ENST00000510108 IGSF1Q8N6C5 1336 aa13.5□□□□□ -0.25
NEK1-205ENST00000510108 ZNF521Q96K83 1311 aa13.5□□□□□ -0.25
NEK1-205ENST00000510108 U2SURPO15042 1029 aaKnown RBP13.49□□□□□ -0.25
NEK1-205ENST00000510108 SOX12O15370 315 aa13.49□□□□□ -0.25
NEK1-205ENST00000510108 HSPA1LP34931 641 aa13.49□□□□□ -0.25
NEK1-205ENST00000510108 RGPD5Q99666 1765 aa13.49□□□□□ -0.25
NEK1-205ENST00000510108 DCAF8Q5TAQ9 597 aa13.48□□□□□ -0.25
NEK1-205ENST00000510108 CCDC146Q8IYE0 955 aa13.48□□□□□ -0.25
NEK1-205ENST00000510108 TSPYL2Q9H2G4 693 aaPredicted RBP13.48□□□□□ -0.25
NEK1-205ENST00000510108 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms