RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 KLF16Q9BXK1 252 aaPredicted RBP8□□□□□ -1.13
CAST-229ENST00000510098 NDUFB9Q9Y6M9 179 aa8□□□□□ -1.13
CAST-229ENST00000510098 SNRPBP14678 240 aaKnown RBP7.99□□□□□ -1.13
CAST-229ENST00000510098 WDR4P57081 412 aaKnown RBP7.99□□□□□ -1.13
CAST-229ENST00000510098 ZBBXA8MT70 800 aa7.98□□□□□ -1.13
CAST-229ENST00000510098 FBXO45P0C2W1 286 aa7.98□□□□□ -1.13
CAST-229ENST00000510098 TIMP2P16035 220 aa7.98□□□□□ -1.13
CAST-229ENST00000510098 NFX1Q12986 1120 aaKnown RBP7.98□□□□□ -1.13
CAST-229ENST00000510098 KCTD15Q96SI1 283 aaPredicted RBP7.98□□□□□ -1.13
CAST-229ENST00000510098 TRIM46Q7Z4K8 759 aa7.97□□□□□ -1.13
CAST-229ENST00000510098 ITPKCQ96DU7 683 aa7.97□□□□□ -1.13
CAST-229ENST00000510098 ZFAND3Q9H8U3 227 aa7.97□□□□□ -1.13
CAST-229ENST00000510098 TBC1D2BQ9UPU7 963 aa7.97□□□□□ -1.13
CAST-229ENST00000510098 ZIC2O95409 532 aaPredicted RBP7.96□□□□□ -1.14
CAST-229ENST00000510098 BMP1P13497 986 aa7.96□□□□□ -1.14
CAST-229ENST00000510098 DZIP3Q86Y13 1208 aaKnown RBP7.96□□□□□ -1.14
CAST-229ENST00000510098 CDV3Q9UKY7 258 aaKnown RBP7.96□□□□□ -1.14
CAST-229ENST00000510098 MCM6Q14566 821 aa7.95□□□□□ -1.14
CAST-229ENST00000510098 CCDC116Q8IYX3 515 aa7.95□□□□□ -1.14
CAST-229ENST00000510098 PRM3Q9NNZ6 103 aa7.95□□□□□ -1.14
CAST-229ENST00000510098 NR1H3Q13133 447 aa7.94□□□□□ -1.14
CAST-229ENST00000510098 INTS6LQ5JSJ4 861 aaKnown RBP7.94□□□□□ -1.14
CAST-229ENST00000510098 PCDHB9Q9Y5E1 797 aa7.94□□□□□ -1.14
CAST-229ENST00000510098 WFS1O76024 890 aa7.93□□□□□ -1.14
CAST-229ENST00000510098 NBPF20Q3BBV1 942 aa7.93□□□□□ -1.14
CAST-229ENST00000510098 PPP1R26Q5T8A7 1209 aaPredicted RBP7.93□□□□□ -1.14
CAST-229ENST00000510098 LCE2CQ5TA81 110 aa7.93□□□□□ -1.14
CAST-229ENST00000510098 GDPD2Q9HCC8 539 aa7.93□□□□□ -1.14
CAST-229ENST00000510098 EMILIN1Q9Y6C2 1016 aa7.93□□□□□ -1.14
CAST-229ENST00000510098 RAB15P59190 212 aa7.92□□□□□ -1.14
CAST-229ENST00000510098 TERTO14746 1132 aaKnown RBP7.91□□□□□ -1.14
CAST-229ENST00000510098 WIPF1O43516 503 aa7.91□□□□□ -1.14
CAST-229ENST00000510098 IRF5Q13568 498 aa7.91□□□□□ -1.14
CAST-229ENST00000510098 MRPL14Q6P1L8 145 aaKnown RBP7.91□□□□□ -1.14
CAST-229ENST00000510098 ESPNB1AK53 854 aa7.9□□□□□ -1.14
CAST-229ENST00000510098 GIGYF1O75420 1035 aaPredicted RBP7.9□□□□□ -1.14
CAST-229ENST00000510098 ABL2P42684 1182 aa7.9□□□□□ -1.14
CAST-229ENST00000510098 DHX9Q08211 1270 aaKnown RBP7.9□□□□□ -1.14
CAST-229ENST00000510098 CBLBQ13191 982 aa7.89□□□□□ -1.15
CAST-229ENST00000510098 ERICH6Q7L0X2 663 aa7.89□□□□□ -1.15
CAST-229ENST00000510098 NPAS3Q8IXF0 933 aa7.89□□□□□ -1.15
CAST-229ENST00000510098 ZFP42Q96MM3 310 aa7.89□□□□□ -1.15
CAST-229ENST00000510098 TMPRSS4Q9NRS4 437 aa7.89□□□□□ -1.15
CAST-229ENST00000510098 PGPEP1Q9NXJ5 209 aa7.89□□□□□ -1.15
CAST-229ENST00000510098 ZNF330Q9Y3S2 320 aaPredicted RBP7.89□□□□□ -1.15
CAST-229ENST00000510098 ERVH48-1M5A8F1 160 aa7.88□□□□□ -1.15
CAST-229ENST00000510098 MEIOBQ8N635 442 aa7.88□□□□□ -1.15
CAST-229ENST00000510098 ZNF592Q92610 1267 aa7.88□□□□□ -1.15
CAST-229ENST00000510098 PURBQ96QR8 312 aaKnown RBP7.88□□□□□ -1.15
CAST-229ENST00000510098 COG6Q9Y2V7 657 aa7.88□□□□□ -1.15
CAST-229ENST00000510098 SCARF1Q14162 830 aa7.87□□□□□ -1.15
CAST-229ENST00000510098 C6orf118Q5T5N4 469 aa7.87□□□□□ -1.15
CAST-229ENST00000510098 C14orf37Q86TY3 774 aa7.87□□□□□ -1.15
CAST-229ENST00000510098 MCCD1P59942 119 aaPredicted RBP7.86□□□□□ -1.15
CAST-229ENST00000510098 VAC14Q08AM6 782 aa7.86□□□□□ -1.15
CAST-229ENST00000510098 SEPT12Q8IYM1 358 aa7.86□□□□□ -1.15
CAST-229ENST00000510098 ZNF784Q8NCA9 323 aaPredicted RBP7.86□□□□□ -1.15
CAST-229ENST00000510098 POM121Q96HA1 1249 aa7.86□□□□□ -1.15
CAST-229ENST00000510098 TIMELESSQ9UNS1 1208 aa7.86□□□□□ -1.15
CAST-229ENST00000510098 FLIIQ13045 1269 aa7.85□□□□□ -1.15
CAST-229ENST00000510098 Q6ZVU0 165 aa7.85□□□□□ -1.15
CAST-229ENST00000510098 LINC00528Q8N1L1 170 aa7.85□□□□□ -1.15
CAST-229ENST00000510098 NXF1Q9UBU9 619 aaKnown RBP7.85□□□□□ -1.15
CAST-229ENST00000510098 LILRA1O75019 489 aa7.84□□□□□ -1.15
CAST-229ENST00000510098 UPP2O95045 317 aa7.84□□□□□ -1.15
CAST-229ENST00000510098 BMP2P12643 396 aa7.84□□□□□ -1.15
CAST-229ENST00000510098 TRIM52Q96A61 297 aa7.84□□□□□ -1.15
CAST-229ENST00000510098 AGBL1Q96MI9 1066 aa7.84□□□□□ -1.15
CAST-229ENST00000510098 TSEN34Q9BSV6 310 aaKnown RBP7.84□□□□□ -1.15
CAST-229ENST00000510098 ADD1P35611 737 aaKnown RBP7.83□□□□□ -1.16
CAST-229ENST00000510098 EIF4G2P78344 907 aaKnown RBP eCLIP7.83□□□□□ -1.16
CAST-229ENST00000510098 CYLDQ9NQC7 956 aa7.83□□□□□ -1.16
CAST-229ENST00000510098 CEP126Q9P2H0 1117 aa7.83□□□□□ -1.16
CAST-229ENST00000510098 SOBPA7XYQ1 873 aa7.82□□□□□ -1.16
CAST-229ENST00000510098 UBTFP17480 764 aaKnown RBP7.82□□□□□ -1.16
CAST-229ENST00000510098 RNF20Q5VTR2 975 aa7.82□□□□□ -1.16
CAST-229ENST00000510098 WASHC4Q2M389 1173 aa7.81□□□□□ -1.16
CAST-229ENST00000510098 H3BM21 787 aa7.8□□□□□ -1.16
CAST-229ENST00000510098 RAD21O60216 631 aa7.8□□□□□ -1.16
CAST-229ENST00000510098 RELBQ01201 579 aa7.8□□□□□ -1.16
CAST-229ENST00000510098 WWC1Q8IX03 1113 aa7.8□□□□□ -1.16
CAST-229ENST00000510098 ZNF395Q9H8N7 513 aaPredicted RBP7.8□□□□□ -1.16
CAST-229ENST00000510098 ADH1AP07327 375 aa7.79□□□□□ -1.16
CAST-229ENST00000510098 CCDC125Q86Z20 511 aa7.79□□□□□ -1.16
CAST-229ENST00000510098 KDF1Q8NAX2 398 aaPredicted RBP7.79□□□□□ -1.16
CAST-229ENST00000510098 SLC16A10Q8TF71 515 aa7.79□□□□□ -1.16
CAST-229ENST00000510098 PCDHB11Q9Y5F2 797 aa7.79□□□□□ -1.16
CAST-229ENST00000510098 SOS2Q07890 1332 aaPredicted RBP7.79□□□□□ -1.16
CAST-229ENST00000510098 SPINT1O43278 529 aa7.78□□□□□ -1.16
CAST-229ENST00000510098 SCTRP47872 440 aa7.78□□□□□ -1.16
CAST-229ENST00000510098 INSM1Q01101 510 aaPredicted RBP7.78□□□□□ -1.16
CAST-229ENST00000510098 TSGA10IPQ3SY00 556 aa7.78□□□□□ -1.16
CAST-229ENST00000510098 CCDC85AQ96PX6 553 aaPredicted RBP7.78□□□□□ -1.16
CAST-229ENST00000510098 MAN1A2O60476 641 aa7.78□□□□□ -1.16
CAST-229ENST00000510098 ERVK-9P63128 1117 aa7.78□□□□□ -1.16
CAST-229ENST00000510098 CC2D2BQ6DHV5 1058 aa7.78□□□□□ -1.16
CAST-229ENST00000510098 PHTF2Q8N3S3 785 aa7.78□□□□□ -1.16
CAST-229ENST00000510098 INSM2Q96T92 566 aaPredicted RBP7.78□□□□□ -1.16
CAST-229ENST00000510098 CDCA7Q9BWT1 371 aaPredicted RBP7.78□□□□□ -1.16
CAST-229ENST00000510098 STK17AQ9UEE5 414 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms