RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 CRYBG1Q9Y4K1 1723 aa22.24■■□□□ 1.15
SCAMP1-203ENST00000510030 AMPHP49418 695 aa22.24■■□□□ 1.15
SCAMP1-203ENST00000510030 RRS1Q15050 365 aaKnown RBP22.24■■□□□ 1.15
SCAMP1-203ENST00000510030 MAP3K19Q56UN5 1328 aa22.24■■□□□ 1.15
SCAMP1-203ENST00000510030 GCP02774 474 aa22.23■■□□□ 1.15
SCAMP1-203ENST00000510030 NGEFQ8N5V2 710 aa22.23■■□□□ 1.15
SCAMP1-203ENST00000510030 HNRNPUQ00839 825 aaKnown RBP eCLIP22.22■■□□□ 1.15
SCAMP1-203ENST00000510030 PEAK1Q9H792 1746 aa22.22■■□□□ 1.15
SCAMP1-203ENST00000510030 ADAMTS8Q9UP79 889 aa22.21■■□□□ 1.15
SCAMP1-203ENST00000510030 AFF2P51816 1311 aa22.21■■□□□ 1.15
SCAMP1-203ENST00000510030 SOX12O15370 315 aa22.2■■□□□ 1.14
SCAMP1-203ENST00000510030 C8orf37Q96NL8 207 aa22.2■■□□□ 1.14
SCAMP1-203ENST00000510030 COL22A1Q8NFW1 1626 aaPredicted RBP22.2■■□□□ 1.14
SCAMP1-203ENST00000510030 NEFMP07197 916 aa22.19■■□□□ 1.14
SCAMP1-203ENST00000510030 CPDO75976 1380 aa22.19■■□□□ 1.14
SCAMP1-203ENST00000510030 ABCA3Q99758 1704 aa22.18■■□□□ 1.14
SCAMP1-203ENST00000510030 ZBED9Q6R2W3 1325 aa22.18■■□□□ 1.14
SCAMP1-203ENST00000510030 U2AF1L5P0DN76 240 aaPredicted RBP22.18■■□□□ 1.14
SCAMP1-203ENST00000510030 U2AF1Q01081 240 aaKnown RBP eCLIP22.18■■□□□ 1.14
SCAMP1-203ENST00000510030 ZNF772Q68DY9 489 aaPredicted RBP22.18■■□□□ 1.14
SCAMP1-203ENST00000510030 U2SURPO15042 1029 aaKnown RBP22.17■■□□□ 1.14
SCAMP1-203ENST00000510030 ADAMTS2O95450 1211 aa22.17■■□□□ 1.14
SCAMP1-203ENST00000510030 ARHGEF25Q86VW2 580 aa22.17■■□□□ 1.14
SCAMP1-203ENST00000510030 IP6K1Q92551 441 aa22.17■■□□□ 1.14
SCAMP1-203ENST00000510030 HOXC9P31274 260 aa22.16■■□□□ 1.14
SCAMP1-203ENST00000510030 HAP1P54257 671 aaPredicted RBP22.16■■□□□ 1.14
SCAMP1-203ENST00000510030 FCHSD2O94868 740 aa22.15■■□□□ 1.14
SCAMP1-203ENST00000510030 FBLN1P23142 703 aa22.15■■□□□ 1.14
SCAMP1-203ENST00000510030 IL13P35225 146 aa22.15■■□□□ 1.14
SCAMP1-203ENST00000510030 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.13
SCAMP1-203ENST00000510030 RUNDC1Q96C34 613 aa22.14■■□□□ 1.13
SCAMP1-203ENST00000510030 RGPD1P0DJD0 1748 aa22.14■■□□□ 1.13
SCAMP1-203ENST00000510030 FAM208AQ9UK61 1670 aaKnown RBP22.14■■□□□ 1.13
SCAMP1-203ENST00000510030 MAPK8IP3Q9UPT6 1336 aa22.12■■□□□ 1.13
SCAMP1-203ENST00000510030 RXRBP28702 533 aa22.12■■□□□ 1.13
SCAMP1-203ENST00000510030 EIF4A2Q14240 407 aaKnown RBP22.12■■□□□ 1.13
SCAMP1-203ENST00000510030 HSP90AB2PQ58FF8 381 aa22.12■■□□□ 1.13
SCAMP1-203ENST00000510030 UPF1Q92900 1129 aaKnown RBP eCLIP22.11■■□□□ 1.13
SCAMP1-203ENST00000510030 RGS12O14924 1447 aa22.11■■□□□ 1.13
SCAMP1-203ENST00000510030 IGSF1Q8N6C5 1336 aa22.07■■□□□ 1.12
SCAMP1-203ENST00000510030 KDRP35968 1356 aa22.07■■□□□ 1.12
SCAMP1-203ENST00000510030 ZBTB7CA1YPR0 619 aa22.06■■□□□ 1.12
SCAMP1-203ENST00000510030 ZC3H6P61129 1189 aaKnown RBP22.06■■□□□ 1.12
SCAMP1-203ENST00000510030 PDE3BQ13370 1112 aa22.06■■□□□ 1.12
SCAMP1-203ENST00000510030 QTRT2Q9H974 415 aaKnown RBP22.06■■□□□ 1.12
SCAMP1-203ENST00000510030 PRDM11Q9NQV5 511 aa22.06■■□□□ 1.12
SCAMP1-203ENST00000510030 KIAA0232Q92628 1395 aa22.06■■□□□ 1.12
SCAMP1-203ENST00000510030 COL18A1P39060 1754 aa22.06■■□□□ 1.12
SCAMP1-203ENST00000510030 PLEKHG2Q9H7P9 1386 aa22.05■■□□□ 1.12
SCAMP1-203ENST00000510030 CABLES1Q8TDN4 633 aa22.05■■□□□ 1.12
SCAMP1-203ENST00000510030 NGLY1Q96IV0 654 aa22.05■■□□□ 1.12
SCAMP1-203ENST00000510030 RSPH6AQ9H0K4 717 aa22.05■■□□□ 1.12
SCAMP1-203ENST00000510030 CAMTA1Q9Y6Y1 1673 aa22.04■■□□□ 1.12
SCAMP1-203ENST00000510030 COL14A1Q05707 1796 aaKnown RBP22.04■■□□□ 1.12
SCAMP1-203ENST00000510030 CCDC146Q8IYE0 955 aa22.03■■□□□ 1.12
SCAMP1-203ENST00000510030 LMO7Q8WWI1 1683 aa22.03■■□□□ 1.12
SCAMP1-203ENST00000510030 ERBB3P21860 1342 aa22.03■■□□□ 1.12
SCAMP1-203ENST00000510030 PLEKHG5O94827 1062 aa22.02■■□□□ 1.12
SCAMP1-203ENST00000510030 PRKAR2BP31323 418 aa22.02■■□□□ 1.12
SCAMP1-203ENST00000510030 PLEKHF1Q96S99 279 aa22.02■■□□□ 1.12
SCAMP1-203ENST00000510030 APAF1O14727 1248 aa22.01■■□□□ 1.11
SCAMP1-203ENST00000510030 CCDC27Q2M243 656 aa22.01■■□□□ 1.11
SCAMP1-203ENST00000510030 SULT6B1Q6IMI4 303 aa22.01■■□□□ 1.11
SCAMP1-203ENST00000510030 TCP11L2Q8N4U5 519 aa22.01■■□□□ 1.11
SCAMP1-203ENST00000510030 ANKRD24Q8TF21 1146 aa22.01■■□□□ 1.11
SCAMP1-203ENST00000510030 RGPD5Q99666 1765 aa22■■□□□ 1.11
SCAMP1-203ENST00000510030 NCAPD2Q15021 1401 aa22■■□□□ 1.11
SCAMP1-203ENST00000510030 EYA1Q99502 592 aa22■■□□□ 1.11
SCAMP1-203ENST00000510030 HMOX1P09601 288 aa21.99■■□□□ 1.11
SCAMP1-203ENST00000510030 LMOD3Q0VAK6 560 aa21.99■■□□□ 1.11
SCAMP1-203ENST00000510030 USP21Q9UK80 565 aa21.99■■□□□ 1.11
SCAMP1-203ENST00000510030 RBM6P78332 1123 aaKnown RBP21.98■■□□□ 1.11
SCAMP1-203ENST00000510030 LTV1Q96GA3 475 aaPredicted RBP21.98■■□□□ 1.11
SCAMP1-203ENST00000510030 CSB-PGBD3P0DP91 1061 aa21.95■■□□□ 1.1
SCAMP1-203ENST00000510030 CALD1Q05682 793 aaKnown RBP21.95■■□□□ 1.1
SCAMP1-203ENST00000510030 COL5A2P05997 1499 aaPredicted RBP21.95■■□□□ 1.1
SCAMP1-203ENST00000510030 TMPOP42166 694 aaKnown RBP21.94■■□□□ 1.1
SCAMP1-203ENST00000510030 NFE2L2Q16236 605 aa21.94■■□□□ 1.1
SCAMP1-203ENST00000510030 GAS2L2Q8NHY3 880 aa21.94■■□□□ 1.1
SCAMP1-203ENST00000510030 AXIN2Q9Y2T1 843 aa21.94■■□□□ 1.1
SCAMP1-203ENST00000510030 WDR17Q8IZU2 1322 aa21.94■■□□□ 1.1
SCAMP1-203ENST00000510030 CHRNA2Q15822 529 aa21.93■■□□□ 1.1
SCAMP1-203ENST00000510030 NWD2Q9ULI1 1742 aa21.93■■□□□ 1.1
SCAMP1-203ENST00000510030 BCL9LQ86UU0 1499 aa21.92■■□□□ 1.1
SCAMP1-203ENST00000510030 ATRNO75882 1429 aa21.92■■□□□ 1.1
SCAMP1-203ENST00000510030 ZNF521Q96K83 1311 aa21.92■■□□□ 1.1
SCAMP1-203ENST00000510030 GOLGA2Q08379 1002 aa21.92■■□□□ 1.1
SCAMP1-203ENST00000510030 AEBP1Q8IUX7 1158 aa21.92■■□□□ 1.1
SCAMP1-203ENST00000510030 WDR63Q8IWG1 891 aa21.92■■□□□ 1.1
SCAMP1-203ENST00000510030 RGPD2P0DJD1 1756 aa21.92■■□□□ 1.1
SCAMP1-203ENST00000510030 NBPF6Q5VWK0 638 aa21.91■■□□□ 1.1
SCAMP1-203ENST00000510030 FNBP4Q8N3X1 1017 aaPredicted RBP21.91■■□□□ 1.1
SCAMP1-203ENST00000510030 NBPF4Q96M43 638 aa21.91■■□□□ 1.1
SCAMP1-203ENST00000510030 PLCH1Q4KWH8 1693 aa21.91■■□□□ 1.1
SCAMP1-203ENST00000510030 RIPK4P57078 832 aa21.9■■□□□ 1.1
SCAMP1-203ENST00000510030 AMOTQ4VCS5 1084 aa21.9■■□□□ 1.1
SCAMP1-203ENST00000510030 WWC1Q8IX03 1113 aa21.9■■□□□ 1.1
SCAMP1-203ENST00000510030 NLRP2Q9NX02 1062 aa21.9■■□□□ 1.1
SCAMP1-203ENST00000510030 EVA1CP58658 441 aa21.89■■□□□ 1.09
SCAMP1-203ENST00000510030 TRPC5Q9UL62 973 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms