RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 CFAP70Q5T0N1 1121 aa7.8□□□□□ -1.16
NEK1-204ENST00000509912 SPTLC1O15269 473 aa7.79□□□□□ -1.16
NEK1-204ENST00000509912 TRIM34Q9BYJ4 488 aa7.79□□□□□ -1.16
NEK1-204ENST00000509912 SEPT9Q9UHD8 586 aaPredicted RBP7.79□□□□□ -1.16
NEK1-204ENST00000509912 LOC105371045A0A1W2PR82 267 aa7.79□□□□□ -1.16
NEK1-204ENST00000509912 LMOD1P29536 600 aaPredicted RBP7.79□□□□□ -1.16
NEK1-204ENST00000509912 TMEM259Q4ZIN3 620 aa7.79□□□□□ -1.16
NEK1-204ENST00000509912 SCAPERQ9BY12 1400 aa7.78□□□□□ -1.16
NEK1-204ENST00000509912 TRAPPC8Q9Y2L5 1435 aa7.78□□□□□ -1.16
NEK1-204ENST00000509912 BANK1Q8NDB2 785 aa7.78□□□□□ -1.16
NEK1-204ENST00000509912 UCN2Q96RP3 112 aa7.78□□□□□ -1.16
NEK1-204ENST00000509912 ADGRL2O95490 1459 aa7.78□□□□□ -1.16
NEK1-204ENST00000509912 NLRP1Q9C000 1473 aa7.78□□□□□ -1.16
NEK1-204ENST00000509912 SPATA31D1Q6ZQQ2 1576 aa7.77□□□□□ -1.16
NEK1-204ENST00000509912 NEURL4Q96JN8 1562 aa7.77□□□□□ -1.16
NEK1-204ENST00000509912 IGSF3O75054 1194 aa7.77□□□□□ -1.16
NEK1-204ENST00000509912 CDK13Q14004 1512 aaKnown RBP7.77□□□□□ -1.17
NEK1-204ENST00000509912 STRCQ7RTU9 1775 aa7.77□□□□□ -1.17
NEK1-204ENST00000509912 PER1O15534 1290 aaPredicted RBP7.77□□□□□ -1.17
NEK1-204ENST00000509912 SCNN1AP37088 669 aa7.77□□□□□ -1.17
NEK1-204ENST00000509912 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.77□□□□□ -1.17
NEK1-204ENST00000509912 ARHGAP5Q13017 1502 aa7.77□□□□□ -1.17
NEK1-204ENST00000509912 SYNMO15061 1565 aa7.77□□□□□ -1.17
NEK1-204ENST00000509912 KDM4AO75164 1064 aa7.77□□□□□ -1.17
NEK1-204ENST00000509912 SLC10A3P09131 477 aa7.76□□□□□ -1.17
NEK1-204ENST00000509912 PALM3A6NDB9 673 aaPredicted RBP7.76□□□□□ -1.17
NEK1-204ENST00000509912 RNF40O75150 1001 aa7.76□□□□□ -1.17
NEK1-204ENST00000509912 FDX1P10109 184 aa7.76□□□□□ -1.17
NEK1-204ENST00000509912 TMEM134Q9H6X4 195 aa7.76□□□□□ -1.17
NEK1-204ENST00000509912 TFIP11Q9UBB9 837 aaKnown RBP7.76□□□□□ -1.17
NEK1-204ENST00000509912 CPS1P31327 1500 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 PRDM15P57071 1507 aaPredicted RBP7.75□□□□□ -1.17
NEK1-204ENST00000509912 CFAP99D6REC4 459 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 PRR7Q8TB68 274 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 TATDN2Q93075 761 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 YEATS2Q9ULM3 1422 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 POTEJP0CG39 1038 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 SLC39A7Q92504 469 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 PPP1R12CQ9BZL4 782 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 IVNS1ABPQ9Y6Y0 642 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 PZPP20742 1482 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 CCDC141Q6ZP82 1450 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 ERBINQ96RT1 1412 aa7.75□□□□□ -1.17
NEK1-204ENST00000509912 HOXB3P14651 431 aaPredicted RBP7.74□□□□□ -1.17
NEK1-204ENST00000509912 MYO3AQ8NEV4 1616 aa7.74□□□□□ -1.17
NEK1-204ENST00000509912 DUOX2Q9NRD8 1548 aa7.74□□□□□ -1.17
NEK1-204ENST00000509912 A2ML1A8K2U0 1454 aa7.74□□□□□ -1.17
NEK1-204ENST00000509912 A2MP01023 1474 aa7.74□□□□□ -1.17
NEK1-204ENST00000509912 DHX29Q7Z478 1369 aaKnown RBP7.74□□□□□ -1.17
NEK1-204ENST00000509912 HOXA2O43364 376 aa7.74□□□□□ -1.17
NEK1-204ENST00000509912 PBXIP1Q96AQ6 731 aa7.74□□□□□ -1.17
NEK1-204ENST00000509912 POLR1AO95602 1720 aaPredicted RBP7.74□□□□□ -1.17
NEK1-204ENST00000509912 NCOA1Q15788 1441 aa7.74□□□□□ -1.17
NEK1-204ENST00000509912 LTBP4Q8N2S1 1624 aa7.74□□□□□ -1.17
NEK1-204ENST00000509912 FUT2Q10981 343 aa7.74□□□□□ -1.17
NEK1-204ENST00000509912 NR6A1Q15406 480 aa7.74□□□□□ -1.17
NEK1-204ENST00000509912 CERKQ8TCT0 537 aa7.74□□□□□ -1.17
NEK1-204ENST00000509912 VPS8Q8N3P4 1428 aa7.73□□□□□ -1.17
NEK1-204ENST00000509912 RPRD2Q5VT52 1461 aaKnown RBP7.73□□□□□ -1.17
NEK1-204ENST00000509912 GPR153Q6NV75 609 aa7.73□□□□□ -1.17
NEK1-204ENST00000509912 PTPRKQ15262 1439 aa7.73□□□□□ -1.17
NEK1-204ENST00000509912 PRAG1Q86YV5 1406 aa7.73□□□□□ -1.17
NEK1-204ENST00000509912 C6orf229H3BNL8 230 aa7.73□□□□□ -1.17
NEK1-204ENST00000509912 C7P10643 843 aa7.73□□□□□ -1.17
NEK1-204ENST00000509912 DNAJB2P25686 324 aa7.73□□□□□ -1.17
NEK1-204ENST00000509912 NCOA3Q9Y6Q9 1424 aa7.73□□□□□ -1.17
NEK1-204ENST00000509912 KCNK17Q96T54 332 aa7.72□□□□□ -1.17
NEK1-204ENST00000509912 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.72□□□□□ -1.17
NEK1-204ENST00000509912 PIK3CDO00329 1044 aa7.72□□□□□ -1.17
NEK1-204ENST00000509912 DIXDC1Q155Q3 683 aa7.72□□□□□ -1.17
NEK1-204ENST00000509912 PUS10Q3MIT2 529 aaKnown RBP7.72□□□□□ -1.17
NEK1-204ENST00000509912 SLIT1O75093 1534 aa7.72□□□□□ -1.17
NEK1-204ENST00000509912 DNMT1P26358 1616 aaKnown RBP7.72□□□□□ -1.17
NEK1-204ENST00000509912 PSEN2P49810 448 aa7.71□□□□□ -1.17
NEK1-204ENST00000509912 SULF1Q8IWU6 871 aa7.71□□□□□ -1.17
NEK1-204ENST00000509912 DEPDC4Q8N2C3 294 aa7.71□□□□□ -1.17
NEK1-204ENST00000509912 AXIN2Q9Y2T1 843 aa7.71□□□□□ -1.17
NEK1-204ENST00000509912 LRRC9Q6ZRR7 1453 aa7.71□□□□□ -1.17
NEK1-204ENST00000509912 MROH1Q8NDA8 1641 aa7.71□□□□□ -1.18
NEK1-204ENST00000509912 SRPK2P78362 688 aaKnown RBP7.71□□□□□ -1.18
NEK1-204ENST00000509912 TBC1D9Q6ZT07 1266 aa7.71□□□□□ -1.18
NEK1-204ENST00000509912 NDUFB9Q9Y6M9 179 aa7.71□□□□□ -1.18
NEK1-204ENST00000509912 ARHGAP23Q9P227 1491 aa7.71□□□□□ -1.18
NEK1-204ENST00000509912 POTEB2H3BUK9 544 aa7.71□□□□□ -1.18
NEK1-204ENST00000509912 RAPGEF3O95398 923 aa7.7□□□□□ -1.18
NEK1-204ENST00000509912 SWT1Q5T5J6 900 aaKnown RBP7.7□□□□□ -1.18
NEK1-204ENST00000509912 ZBTB3Q9H5J0 574 aa7.7□□□□□ -1.18
NEK1-204ENST00000509912 FBXO41Q8TF61 875 aa7.7□□□□□ -1.18
NEK1-204ENST00000509912 RBM27Q9P2N5 1060 aaKnown RBP7.7□□□□□ -1.18
NEK1-204ENST00000509912 UHRF1BP1Q6BDS2 1440 aa7.69□□□□□ -1.18
NEK1-204ENST00000509912 UNC13BO14795 1591 aa7.69□□□□□ -1.18
NEK1-204ENST00000509912 DIP2AQ14689 1571 aa7.69□□□□□ -1.18
NEK1-204ENST00000509912 CEP170BQ9Y4F5 1589 aaPredicted RBP7.69□□□□□ -1.18
NEK1-204ENST00000509912 ARID4BQ4LE39 1312 aaPredicted RBP7.69□□□□□ -1.18
NEK1-204ENST00000509912 MYOM3Q5VTT5 1437 aa7.69□□□□□ -1.18
NEK1-204ENST00000509912 SYCP2Q9BX26 1530 aa7.69□□□□□ -1.18
NEK1-204ENST00000509912 NWD1Q149M9 1564 aa7.68□□□□□ -1.18
NEK1-204ENST00000509912 LGR5O75473 907 aa7.68□□□□□ -1.18
NEK1-204ENST00000509912 STK32AQ8WU08 396 aa7.68□□□□□ -1.18
NEK1-204ENST00000509912 GCC2Q8IWJ2 1684 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms