RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 LARP1Q6PKG0 1096 aaKnown RBP22.6■■□□□ 1.21
SKP2-205ENST00000509692 COL5A2P05997 1499 aaPredicted RBP22.59■■□□□ 1.21
SKP2-205ENST00000509692 AXIN2Q9Y2T1 843 aa22.59■■□□□ 1.21
SKP2-205ENST00000509692 OVOS2A0A0J9YW53 1432 aa22.58■■□□□ 1.21
SKP2-205ENST00000509692 OVOS2Q6IE36 1432 aa22.58■■□□□ 1.21
SKP2-205ENST00000509692 RGPD5Q99666 1765 aa22.58■■□□□ 1.2
SKP2-205ENST00000509692 ZNF316A6NFI3 1004 aaPredicted RBP22.57■■□□□ 1.2
SKP2-205ENST00000509692 USP35Q9P2H5 1018 aa22.57■■□□□ 1.2
SKP2-205ENST00000509692 PANK3Q9H999 370 aa22.56■■□□□ 1.2
SKP2-205ENST00000509692 A0A0G2JS52 829 aa22.54■■□□□ 1.2
SKP2-205ENST00000509692 MYT1Q01538 1121 aa22.54■■□□□ 1.2
SKP2-205ENST00000509692 CARD14Q9BXL6 1004 aa22.54■■□□□ 1.2
SKP2-205ENST00000509692 THSD7AQ9UPZ6 1657 aa22.54■■□□□ 1.2
SKP2-205ENST00000509692 LTN1O94822 1766 aa22.54■■□□□ 1.2
SKP2-205ENST00000509692 FYB1O15117 783 aa22.53■■□□□ 1.2
SKP2-205ENST00000509692 KRT27Q7Z3Y8 459 aa22.52■■□□□ 1.2
SKP2-205ENST00000509692 COG3Q96JB2 828 aa22.52■■□□□ 1.2
SKP2-205ENST00000509692 NSD3Q9BZ95 1437 aa22.51■■□□□ 1.19
SKP2-205ENST00000509692 TCP11L2Q8N4U5 519 aa22.5■■□□□ 1.19
SKP2-205ENST00000509692 GGNBP2Q9H3C7 697 aa22.5■■□□□ 1.19
SKP2-205ENST00000509692 CRB1P82279 1406 aa22.5■■□□□ 1.19
SKP2-205ENST00000509692 FBLN1P23142 703 aa22.49■■□□□ 1.19
SKP2-205ENST00000509692 BARGINQ6ZT62 677 aa22.49■■□□□ 1.19
SKP2-205ENST00000509692 ABCC6O95255 1503 aa22.49■■□□□ 1.19
SKP2-205ENST00000509692 KIF20BQ96Q89 1820 aa22.49■■□□□ 1.19
SKP2-205ENST00000509692 WDR17Q8IZU2 1322 aa22.48■■□□□ 1.19
SKP2-205ENST00000509692 TOM1L2Q6ZVM7 507 aa22.47■■□□□ 1.19
SKP2-205ENST00000509692 THRAP3Q9Y2W1 955 aaKnown RBP22.46■■□□□ 1.19
SKP2-205ENST00000509692 FAM182BQ5T319 152 aa22.46■■□□□ 1.19
SKP2-205ENST00000509692 CSB-PGBD3P0DP91 1061 aa22.44■■□□□ 1.18
SKP2-205ENST00000509692 DDX10Q13206 875 aaKnown RBP22.44■■□□□ 1.18
SKP2-205ENST00000509692 KNSTRNQ9Y448 316 aa22.44■■□□□ 1.18
SKP2-205ENST00000509692 CGNL1Q0VF96 1302 aa22.43■■□□□ 1.18
SKP2-205ENST00000509692 MAP3K19Q56UN5 1328 aa22.43■■□□□ 1.18
SKP2-205ENST00000509692 PER1O15534 1290 aaPredicted RBP22.42■■□□□ 1.18
SKP2-205ENST00000509692 ERBB3P21860 1342 aa22.42■■□□□ 1.18
SKP2-205ENST00000509692 IP6K1Q92551 441 aa22.42■■□□□ 1.18
SKP2-205ENST00000509692 CARD10Q9BWT7 1032 aa22.42■■□□□ 1.18
SKP2-205ENST00000509692 PARP4Q9UKK3 1724 aaKnown RBP22.41■■□□□ 1.18
SKP2-205ENST00000509692 RRS1Q15050 365 aaKnown RBP22.4■■□□□ 1.18
SKP2-205ENST00000509692 CCDC125Q86Z20 511 aa22.4■■□□□ 1.18
SKP2-205ENST00000509692 ANKRD24Q8TF21 1146 aa22.4■■□□□ 1.18
SKP2-205ENST00000509692 WNK3Q9BYP7 1800 aa22.4■■□□□ 1.18
SKP2-205ENST00000509692 BLMP54132 1417 aaPredicted RBP22.39■■□□□ 1.17
SKP2-205ENST00000509692 ANKRD26Q9UPS8 1709 aa22.39■■□□□ 1.17
SKP2-205ENST00000509692 HOXC9P31274 260 aa22.39■■□□□ 1.17
SKP2-205ENST00000509692 AMPHP49418 695 aa22.37■■□□□ 1.17
SKP2-205ENST00000509692 PDE3BQ13370 1112 aa22.37■■□□□ 1.17
SKP2-205ENST00000509692 AMER1Q5JTC6 1135 aaPredicted RBP22.36■■□□□ 1.17
SKP2-205ENST00000509692 NLRP2Q9NX02 1062 aa22.36■■□□□ 1.17
SKP2-205ENST00000509692 LRRC37A3O60309 1634 aa22.36■■□□□ 1.17
SKP2-205ENST00000509692 NSD2O96028 1365 aa22.36■■□□□ 1.17
SKP2-205ENST00000509692 LTV1Q96GA3 475 aaPredicted RBP22.35■■□□□ 1.17
SKP2-205ENST00000509692 DISP2A7MBM2 1401 aa22.35■■□□□ 1.17
SKP2-205ENST00000509692 PEAK1Q9H792 1746 aa22.34■■□□□ 1.17
SKP2-205ENST00000509692 DDB1Q16531 1140 aa22.33■■□□□ 1.17
SKP2-205ENST00000509692 CDCA7Q9BWT1 371 aaPredicted RBP22.33■■□□□ 1.17
SKP2-205ENST00000509692 RTL1A6NKG5 1358 aa22.33■■□□□ 1.16
SKP2-205ENST00000509692 FAM196AQ6ZSG2 479 aa22.32■■□□□ 1.16
SKP2-205ENST00000509692 DEFB132Q7Z7B7 95 aa22.32■■□□□ 1.16
SKP2-205ENST00000509692 RGPD2P0DJD1 1756 aa22.32■■□□□ 1.16
SKP2-205ENST00000509692 CC2D1BQ5T0F9 858 aaKnown RBP22.31■■□□□ 1.16
SKP2-205ENST00000509692 NPC1L1Q9UHC9 1359 aa22.31■■□□□ 1.16
SKP2-205ENST00000509692 MAP2P11137 1827 aaKnown RBP22.31■■□□□ 1.16
SKP2-205ENST00000509692 FAM208AQ9UK61 1670 aaKnown RBP22.31■■□□□ 1.16
SKP2-205ENST00000509692 EMILIN1Q9Y6C2 1016 aa22.31■■□□□ 1.16
SKP2-205ENST00000509692 SF3B2Q13435 895 aaKnown RBP22.3■■□□□ 1.16
SKP2-205ENST00000509692 HSP90AB2PQ58FF8 381 aa22.3■■□□□ 1.16
SKP2-205ENST00000509692 RGPD1P0DJD0 1748 aa22.29■■□□□ 1.16
SKP2-205ENST00000509692 CNGB1Q14028 1251 aaPredicted RBP22.29■■□□□ 1.16
SKP2-205ENST00000509692 TRIM37O94972 964 aa22.28■■□□□ 1.16
SKP2-205ENST00000509692 MORC1Q86VD1 984 aa22.28■■□□□ 1.16
SKP2-205ENST00000509692 TNS1Q9HBL0 1735 aaKnown RBP22.28■■□□□ 1.16
SKP2-205ENST00000509692 FLT4P35916 1363 aa22.28■■□□□ 1.16
SKP2-205ENST00000509692 KIF24Q5T7B8 1368 aa22.28■■□□□ 1.16
SKP2-205ENST00000509692 MARCH10Q8NA82 808 aaPredicted RBP22.28■■□□□ 1.16
SKP2-205ENST00000509692 INSRP06213 1382 aa22.27■■□□□ 1.16
SKP2-205ENST00000509692 EXOC5O00471 708 aa22.27■■□□□ 1.16
SKP2-205ENST00000509692 IL2RBP14784 551 aa22.27■■□□□ 1.16
SKP2-205ENST00000509692 TNNT2P45379 298 aaPredicted RBP22.27■■□□□ 1.16
SKP2-205ENST00000509692 SRCAPQ6ZRS2 3230 aa22.27■■□□□ 1.15
SKP2-205ENST00000509692 OVOS2A0A0G2JMS6 1433 aa22.25■■□□□ 1.15
SKP2-205ENST00000509692 PPM1GO15355 546 aaPredicted RBP22.25■■□□□ 1.15
SKP2-205ENST00000509692 NBPF6Q5VWK0 638 aa22.25■■□□□ 1.15
SKP2-205ENST00000509692 NBPF4Q96M43 638 aa22.25■■□□□ 1.15
SKP2-205ENST00000509692 POLKQ9UBT6 870 aa22.25■■□□□ 1.15
SKP2-205ENST00000509692 TNS2Q63HR2 1409 aa22.24■■□□□ 1.15
SKP2-205ENST00000509692 SBF2Q86WG5 1849 aa22.24■■□□□ 1.15
SKP2-205ENST00000509692 BAG6P46379 1132 aa22.23■■□□□ 1.15
SKP2-205ENST00000509692 EN1Q05925 392 aaPredicted RBP22.22■■□□□ 1.15
SKP2-205ENST00000509692 USHBP1Q8N6Y0 703 aa22.21■■□□□ 1.15
SKP2-205ENST00000509692 SMG6Q86US8 1419 aaKnown RBP22.21■■□□□ 1.15
SKP2-205ENST00000509692 BCL9O00512 1426 aa22.19■■□□□ 1.14
SKP2-205ENST00000509692 APBA3O96018 575 aa22.19■■□□□ 1.14
SKP2-205ENST00000509692 PTF1AQ7RTS3 328 aa22.18■■□□□ 1.14
SKP2-205ENST00000509692 MEGF6O75095 1541 aa22.18■■□□□ 1.14
SKP2-205ENST00000509692 PARD3Q8TEW0 1356 aa22.17■■□□□ 1.14
SKP2-205ENST00000509692 EZH2Q15910 746 aaKnown RBP22.16■■□□□ 1.14
SKP2-205ENST00000509692 CAMKK2Q96RR4 588 aa22.16■■□□□ 1.14
SKP2-205ENST00000509692 RALBP1Q15311 655 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms