RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 AGERQ15109 404 aa9.42□□□□□ -0.9
NIPBL-206ENST00000509429 C4orf48Q5BLP8 95 aa9.42□□□□□ -0.9
NIPBL-206ENST00000509429 MKL2Q9ULH7 1088 aa9.42□□□□□ -0.9
NIPBL-206ENST00000509429 CTHP32929 405 aa9.41□□□□□ -0.9
NIPBL-206ENST00000509429 DESI1Q6ICB0 168 aa9.41□□□□□ -0.9
NIPBL-206ENST00000509429 CCDC116Q8IYX3 515 aa9.41□□□□□ -0.9
NIPBL-206ENST00000509429 CUEDC1Q9NWM3 386 aaPredicted RBP9.41□□□□□ -0.9
NIPBL-206ENST00000509429 CTSOP43234 321 aaPredicted RBP9.4□□□□□ -0.9
NIPBL-206ENST00000509429 BPHLQ86WA6 291 aaPredicted RBP9.4□□□□□ -0.9
NIPBL-206ENST00000509429 C1QTNF9BB2RNN3 333 aa9.39□□□□□ -0.91
NIPBL-206ENST00000509429 CBLBQ13191 982 aa9.39□□□□□ -0.91
NIPBL-206ENST00000509429 PRR7Q8TB68 274 aa9.39□□□□□ -0.91
NIPBL-206ENST00000509429 ZFP64Q9NPA5 681 aa9.39□□□□□ -0.91
NIPBL-206ENST00000509429 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-206ENST00000509429 MAP4K5Q9Y4K4 846 aa9.39□□□□□ -0.91
NIPBL-206ENST00000509429 OIP5O43482 229 aa9.38□□□□□ -0.91
NIPBL-206ENST00000509429 FOXR1Q6PIV2 292 aa9.38□□□□□ -0.91
NIPBL-206ENST00000509429 NUTM1Q86Y26 1132 aa9.38□□□□□ -0.91
NIPBL-206ENST00000509429 ARTNQ5T4W7 220 aa9.37□□□□□ -0.91
NIPBL-206ENST00000509429 VASH1Q7L8A9 365 aaPredicted RBP9.37□□□□□ -0.91
NIPBL-206ENST00000509429 CD163Q86VB7 1156 aa9.36□□□□□ -0.91
NIPBL-206ENST00000509429 RNF217Q8TC41 542 aa9.36□□□□□ -0.91
NIPBL-206ENST00000509429 GMCL1Q96IK5 515 aa9.36□□□□□ -0.91
NIPBL-206ENST00000509429 PGPEP1Q9NXJ5 209 aa9.36□□□□□ -0.91
NIPBL-206ENST00000509429 NBPF11Q86T75 865 aa9.35□□□□□ -0.91
NIPBL-206ENST00000509429 INSM2Q96T92 566 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-206ENST00000509429 FOXD4L6Q3SYB3 417 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-206ENST00000509429 FOXD4L3Q6VB84 417 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-206ENST00000509429 C1QTNF2Q9BXJ5 285 aa9.34□□□□□ -0.91
NIPBL-206ENST00000509429 POLMQ9NP87 494 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-206ENST00000509429 GPR25O00155 361 aa9.33□□□□□ -0.92
NIPBL-206ENST00000509429 DOC2BQ14184 412 aa9.33□□□□□ -0.92
NIPBL-206ENST00000509429 GRIN2CQ14957 1233 aa9.33□□□□□ -0.92
NIPBL-206ENST00000509429 ZNF837Q96EG3 531 aaPredicted RBP9.33□□□□□ -0.92
NIPBL-206ENST00000509429 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
NIPBL-206ENST00000509429 PPP1R26Q5T8A7 1209 aaPredicted RBP9.32□□□□□ -0.92
NIPBL-206ENST00000509429 LYPD8Q6UX82 237 aa9.31□□□□□ -0.92
NIPBL-206ENST00000509429 TRIM22Q8IYM9 498 aa9.31□□□□□ -0.92
NIPBL-206ENST00000509429 SPDYE5A6NIY4 337 aa9.3□□□□□ -0.92
NIPBL-206ENST00000509429 COBLO75128 1261 aa9.3□□□□□ -0.92
NIPBL-206ENST00000509429 TRMT44Q8IYL2 757 aaKnown RBP9.3□□□□□ -0.92
NIPBL-206ENST00000509429 CFAP44Q96MT7 982 aa9.3□□□□□ -0.92
NIPBL-206ENST00000509429 NSFL1CQ9UNZ2 370 aaKnown RBP9.3□□□□□ -0.92
NIPBL-206ENST00000509429 SMYD5Q6GMV2 418 aa9.29□□□□□ -0.92
NIPBL-206ENST00000509429 AGBL1Q96MI9 1066 aa9.29□□□□□ -0.92
NIPBL-206ENST00000509429 CHRNA4P43681 627 aa9.28□□□□□ -0.92
NIPBL-206ENST00000509429 RELBQ01201 579 aa9.28□□□□□ -0.92
NIPBL-206ENST00000509429 PAXIP1Q6ZW49 1069 aaPredicted RBP9.28□□□□□ -0.92
NIPBL-206ENST00000509429 RRAGCQ9HB90 399 aa9.28□□□□□ -0.92
NIPBL-206ENST00000509429 MAP10Q9P2G4 905 aa9.28□□□□□ -0.92
NIPBL-206ENST00000509429 SHISA8B8ZZ34 492 aa9.27□□□□□ -0.93
NIPBL-206ENST00000509429 F12P00748 615 aaPredicted RBP9.27□□□□□ -0.93
NIPBL-206ENST00000509429 MTMR2Q13614 643 aa9.27□□□□□ -0.93
NIPBL-206ENST00000509429 SUV39H2Q9H5I1 410 aa9.27□□□□□ -0.93
NIPBL-206ENST00000509429 MX2P20592 715 aa9.26□□□□□ -0.93
NIPBL-206ENST00000509429 OXCT2Q9BYC2 517 aaPredicted RBP9.26□□□□□ -0.93
NIPBL-206ENST00000509429 DBN1Q16643 649 aa9.25□□□□□ -0.93
NIPBL-206ENST00000509429 TRERF1Q96PN7 1200 aa9.25□□□□□ -0.93
NIPBL-206ENST00000509429 PIK3R2O00459 728 aa9.24□□□□□ -0.93
NIPBL-206ENST00000509429 LINC00114Q6XXX2 140 aa9.24□□□□□ -0.93
NIPBL-206ENST00000509429 KRTAP4-9Q9BYQ8 210 aa9.24□□□□□ -0.93
NIPBL-206ENST00000509429 TESPA1A2RU30 521 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-206ENST00000509429 PRPF38BQ5VTL8 546 aaKnown RBP9.23□□□□□ -0.93
NIPBL-206ENST00000509429 LYSMD3Q7Z3D4 306 aa9.23□□□□□ -0.93
NIPBL-206ENST00000509429 FAM217BQ9NTX9 383 aaPredicted RBP9.23□□□□□ -0.93
NIPBL-206ENST00000509429 FOXD4L5Q5VV16 416 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-206ENST00000509429 GTPBP3Q969Y2 492 aaKnown RBP9.22□□□□□ -0.93
NIPBL-206ENST00000509429 ZNF395Q9H8N7 513 aaPredicted RBP9.22□□□□□ -0.93
NIPBL-206ENST00000509429 MAP2K3P46734 347 aa9.21□□□□□ -0.94
NIPBL-206ENST00000509429 NDUFV2P19404 249 aa9.2□□□□□ -0.94
NIPBL-206ENST00000509429 H7C1W4 665 aa9.19□□□□□ -0.94
NIPBL-206ENST00000509429 GNB5O14775 395 aa9.19□□□□□ -0.94
NIPBL-206ENST00000509429 RSPO4Q2I0M5 234 aaPredicted RBP9.19□□□□□ -0.94
NIPBL-206ENST00000509429 RIPOR1Q6ZS17 1223 aa9.19□□□□□ -0.94
NIPBL-206ENST00000509429 P3H3Q8IVL6 736 aa9.19□□□□□ -0.94
NIPBL-206ENST00000509429 GPCPD1Q9NPB8 672 aa9.19□□□□□ -0.94
NIPBL-206ENST00000509429 GATA4P43694 442 aa9.18□□□□□ -0.94
NIPBL-206ENST00000509429 MAP2K5Q13163 448 aa9.18□□□□□ -0.94
NIPBL-206ENST00000509429 C1orf229Q6ZS94 237 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-206ENST00000509429 ARMC2Q8NEN0 867 aa9.18□□□□□ -0.94
NIPBL-206ENST00000509429 KRTAP4-2Q9BYR5 136 aa9.18□□□□□ -0.94
NIPBL-206ENST00000509429 YBX3P16989 372 aaKnown RBP eCLIP9.17□□□□□ -0.94
NIPBL-206ENST00000509429 HOXB4P17483 251 aaPredicted RBP9.17□□□□□ -0.94
NIPBL-206ENST00000509429 DHX9Q08211 1270 aaKnown RBP9.17□□□□□ -0.94
NIPBL-206ENST00000509429 SPIRE2Q8WWL2 714 aa9.17□□□□□ -0.94
NIPBL-206ENST00000509429 EDARADDQ8WWZ3 215 aa9.17□□□□□ -0.94
NIPBL-206ENST00000509429 MAGEB6P1A0A0J9YX57 407 aa9.16□□□□□ -0.94
NIPBL-206ENST00000509429 MOXD2PA6NHM9 499 aa9.16□□□□□ -0.94
NIPBL-206ENST00000509429 CLCN1P35523 988 aa9.16□□□□□ -0.94
NIPBL-206ENST00000509429 NKAPLQ5M9Q1 402 aa9.16□□□□□ -0.94
NIPBL-206ENST00000509429 SH3BP5LQ7L8J4 393 aa9.16□□□□□ -0.94
NIPBL-206ENST00000509429 NOP53Q9NZM5 478 aaKnown RBP9.16□□□□□ -0.94
NIPBL-206ENST00000509429 IRF6O14896 467 aa9.14□□□□□ -0.95
NIPBL-206ENST00000509429 RHOQP17081 205 aa9.14□□□□□ -0.95
NIPBL-206ENST00000509429 NBPF14Q5TI25 921 aa9.14□□□□□ -0.95
NIPBL-206ENST00000509429 PRICKLE2Q7Z3G6 844 aa9.14□□□□□ -0.95
NIPBL-206ENST00000509429 GPIHBP1Q8IV16 184 aa9.14□□□□□ -0.95
NIPBL-206ENST00000509429 GDF2Q9UK05 429 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-206ENST00000509429 CFAP99D6REC4 459 aa9.12□□□□□ -0.95
NIPBL-206ENST00000509429 AMPD1P23109 780 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms