RNA–Protein interactions for RNA: ENST00000509290.1

SEL1L3-205, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-205ENST00000509290 CCDC116Q8IYX3 515 aa8.97□□□□□ -0.97
SEL1L3-205ENST00000509290 LINC00528Q8N1L1 170 aa8.97□□□□□ -0.97
SEL1L3-205ENST00000509290 H3BM21 787 aa8.96□□□□□ -0.98
SEL1L3-205ENST00000509290 NEUROD2Q15784 382 aa8.96□□□□□ -0.98
SEL1L3-205ENST00000509290 NPAS3Q8IXF0 933 aa8.95□□□□□ -0.98
SEL1L3-205ENST00000509290 SLC10A4Q96EP9 437 aa8.95□□□□□ -0.98
SEL1L3-205ENST00000509290 GOPCQ9HD26 462 aa8.95□□□□□ -0.98
SEL1L3-205ENST00000509290 EMILIN1Q9Y6C2 1016 aa8.95□□□□□ -0.98
SEL1L3-205ENST00000509290 BMP2P12643 396 aa8.94□□□□□ -0.98
SEL1L3-205ENST00000509290 PPP1R26Q5T8A7 1209 aaPredicted RBP8.94□□□□□ -0.98
SEL1L3-205ENST00000509290 ZBTB33Q86T24 672 aa8.94□□□□□ -0.98
SEL1L3-205ENST00000509290 SLC16A10Q8TF71 515 aa8.94□□□□□ -0.98
SEL1L3-205ENST00000509290 KCTD15Q96SI1 283 aaPredicted RBP8.94□□□□□ -0.98
SEL1L3-205ENST00000509290 PTK2Q05397 1052 aa8.93□□□□□ -0.98
SEL1L3-205ENST00000509290 IL27Q8NEV9 243 aa8.93□□□□□ -0.98
SEL1L3-205ENST00000509290 ADAM32Q8TC27 787 aa8.93□□□□□ -0.98
SEL1L3-205ENST00000509290 GPSM3Q9Y4H4 160 aa8.93□□□□□ -0.98
SEL1L3-205ENST00000509290 ERBB4Q15303 1308 aa8.93□□□□□ -0.98
SEL1L3-205ENST00000509290 GMPRP36959 345 aa8.92□□□□□ -0.98
SEL1L3-205ENST00000509290 BRPF1P55201 1214 aaPredicted RBP8.92□□□□□ -0.98
SEL1L3-205ENST00000509290 CBLBQ13191 982 aa8.92□□□□□ -0.98
SEL1L3-205ENST00000509290 INTS6LQ5JSJ4 861 aaKnown RBP8.92□□□□□ -0.98
SEL1L3-205ENST00000509290 PCMTD1Q96MG8 357 aaPredicted RBP8.92□□□□□ -0.98
SEL1L3-205ENST00000509290 TRIM34Q9BYJ4 488 aa8.92□□□□□ -0.98
SEL1L3-205ENST00000509290 UPP2O95045 317 aa8.91□□□□□ -0.98
SEL1L3-205ENST00000509290 IRF7Q92985 503 aa8.91□□□□□ -0.98
SEL1L3-205ENST00000509290 CDV3Q9UKY7 258 aaKnown RBP8.91□□□□□ -0.98
SEL1L3-205ENST00000509290 SOS2Q07890 1332 aaPredicted RBP8.9□□□□□ -0.98
SEL1L3-205ENST00000509290 MAN1A2O60476 641 aa8.9□□□□□ -0.98
SEL1L3-205ENST00000509290 INSM1Q01101 510 aaPredicted RBP8.9□□□□□ -0.98
SEL1L3-205ENST00000509290 PGPEP1Q9NXJ5 209 aa8.9□□□□□ -0.98
SEL1L3-205ENST00000509290 DNMT3LQ9UJW3 386 aa8.9□□□□□ -0.98
SEL1L3-205ENST00000509290 Q6ZVU0 165 aa8.89□□□□□ -0.99
SEL1L3-205ENST00000509290 TSEN34Q9BSV6 310 aaKnown RBP8.89□□□□□ -0.99
SEL1L3-205ENST00000509290 TMEM259Q4ZIN3 620 aa8.88□□□□□ -0.99
SEL1L3-205ENST00000509290 STK17AQ9UEE5 414 aa8.88□□□□□ -0.99
SEL1L3-205ENST00000509290 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
SEL1L3-205ENST00000509290 PNMA1Q8ND90 353 aa8.87□□□□□ -0.99
SEL1L3-205ENST00000509290 GJD4Q96KN9 370 aaPredicted RBP8.87□□□□□ -0.99
SEL1L3-205ENST00000509290 DHX9Q08211 1270 aaKnown RBP8.86□□□□□ -0.99
SEL1L3-205ENST00000509290 NBPF20Q3BBV1 942 aa8.86□□□□□ -0.99
SEL1L3-205ENST00000509290 TTLL8A6PVC2 850 aa8.85□□□□□ -0.99
SEL1L3-205ENST00000509290 VSIG8P0DPA2 414 aa8.85□□□□□ -0.99
SEL1L3-205ENST00000509290 RAB15P59190 212 aa8.85□□□□□ -0.99
SEL1L3-205ENST00000509290 AGBL1Q96MI9 1066 aa8.85□□□□□ -0.99
SEL1L3-205ENST00000509290 TMPRSS4Q9NRS4 437 aa8.85□□□□□ -0.99
SEL1L3-205ENST00000509290 SPINT1O43278 529 aa8.84□□□□□ -0.99
SEL1L3-205ENST00000509290 DZIP3Q86Y13 1208 aaKnown RBP8.84□□□□□ -0.99
SEL1L3-205ENST00000509290 ZNF784Q8NCA9 323 aaPredicted RBP8.84□□□□□ -0.99
SEL1L3-205ENST00000509290 ESPNB1AK53 854 aa8.83□□□□□ -1
SEL1L3-205ENST00000509290 PPFIA3O75145 1194 aa8.83□□□□□ -1
SEL1L3-205ENST00000509290 FIGNL2A6NMB9 653 aa8.82□□□□□ -1
SEL1L3-205ENST00000509290 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
SEL1L3-205ENST00000509290 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.82□□□□□ -1
SEL1L3-205ENST00000509290 TPRNQ4KMQ1 711 aa8.82□□□□□ -1
SEL1L3-205ENST00000509290 LILRA1O75019 489 aa8.81□□□□□ -1
SEL1L3-205ENST00000509290 FBXO45P0C2W1 286 aa8.81□□□□□ -1
SEL1L3-205ENST00000509290 RELBQ01201 579 aa8.81□□□□□ -1
SEL1L3-205ENST00000509290 ZBBXA8MT70 800 aa8.8□□□□□ -1
SEL1L3-205ENST00000509290 GPR37L1O60883 481 aa8.8□□□□□ -1
SEL1L3-205ENST00000509290 CTSOP43234 321 aaPredicted RBP8.8□□□□□ -1
SEL1L3-205ENST00000509290 PTSQ03393 145 aa8.8□□□□□ -1
SEL1L3-205ENST00000509290 INSM2Q96T92 566 aaPredicted RBP8.8□□□□□ -1
SEL1L3-205ENST00000509290 ADD1P35611 737 aaKnown RBP8.79□□□□□ -1
SEL1L3-205ENST00000509290 KDF1Q8NAX2 398 aaPredicted RBP8.79□□□□□ -1
SEL1L3-205ENST00000509290 ZSCAN1Q8NBB4 408 aa8.79□□□□□ -1
SEL1L3-205ENST00000509290 ZNF395Q9H8N7 513 aaPredicted RBP8.79□□□□□ -1
SEL1L3-205ENST00000509290 ADH1AP07327 375 aa8.78□□□□□ -1
SEL1L3-205ENST00000509290 MTMR14Q8NCE2 650 aa8.78□□□□□ -1
SEL1L3-205ENST00000509290 GIGYF1O75420 1035 aaPredicted RBP8.77□□□□□ -1.01
SEL1L3-205ENST00000509290 PCDHB9Q9Y5E1 797 aa8.77□□□□□ -1.01
SEL1L3-205ENST00000509290 SEPT12Q8IYM1 358 aa8.76□□□□□ -1.01
SEL1L3-205ENST00000509290 BANK1Q8NDB2 785 aa8.76□□□□□ -1.01
SEL1L3-205ENST00000509290 RNF217Q8TC41 542 aa8.76□□□□□ -1.01
SEL1L3-205ENST00000509290 POLMQ9NP87 494 aaPredicted RBP8.76□□□□□ -1.01
SEL1L3-205ENST00000509290 CYLDQ9NQC7 956 aa8.76□□□□□ -1.01
SEL1L3-205ENST00000509290 FOXD4L5Q5VV16 416 aaPredicted RBP8.75□□□□□ -1.01
SEL1L3-205ENST00000509290 CCDC155Q8N6L0 562 aa8.75□□□□□ -1.01
SEL1L3-205ENST00000509290 GPR161Q8N6U8 529 aaKnown RBP8.75□□□□□ -1.01
SEL1L3-205ENST00000509290 SNRKQ9NRH2 765 aa8.75□□□□□ -1.01
SEL1L3-205ENST00000509290 SLC35F4A4IF30 521 aa8.74□□□□□ -1.01
SEL1L3-205ENST00000509290 SOCS7O14512 581 aa8.74□□□□□ -1.01
SEL1L3-205ENST00000509290 PTGIRP43119 386 aa8.74□□□□□ -1.01
SEL1L3-205ENST00000509290 KRT76Q01546 638 aa8.73□□□□□ -1.01
SEL1L3-205ENST00000509290 NR1H3Q13133 447 aa8.73□□□□□ -1.01
SEL1L3-205ENST00000509290 SENP3-EIF4A1A0A087X0R7 540 aa8.72□□□□□ -1.01
SEL1L3-205ENST00000509290 NDUFB9Q9Y6M9 179 aa8.72□□□□□ -1.01
SEL1L3-205ENST00000509290 FAM181BA6NEQ2 426 aa8.71□□□□□ -1.02
SEL1L3-205ENST00000509290 NANOS1Q8WY41 292 aaKnown RBP8.71□□□□□ -1.02
SEL1L3-205ENST00000509290 ITGA6P23229 1130 aa8.69□□□□□ -1.02
SEL1L3-205ENST00000509290 ERVK-9P63128 1117 aa8.69□□□□□ -1.02
SEL1L3-205ENST00000509290 ATP5J2-PTCD1G3V325 749 aa8.68□□□□□ -1.02
SEL1L3-205ENST00000509290 SCTRP47872 440 aa8.68□□□□□ -1.02
SEL1L3-205ENST00000509290 RNFT1Q5M7Z0 435 aa8.67□□□□□ -1.02
SEL1L3-205ENST00000509290 CC2D2BQ6DHV5 1058 aa8.67□□□□□ -1.02
SEL1L3-205ENST00000509290 CNTNAP3BQ96NU0 1288 aa8.67□□□□□ -1.02
SEL1L3-205ENST00000509290 COL25A1Q9BXS0 654 aaPredicted RBP8.67□□□□□ -1.02
SEL1L3-205ENST00000509290 CNTNAP3Q9BZ76 1288 aa8.67□□□□□ -1.02
SEL1L3-205ENST00000509290 RNF144AP50876 292 aaPredicted RBP8.66□□□□□ -1.02
SEL1L3-205ENST00000509290 LYSMD3Q7Z3D4 306 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms