RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 FAM174AQ8TBP5 190 aa8.21□□□□□ -1.1
TRAPPC13-210ENST00000509234 ZNF592Q92610 1267 aa8.21□□□□□ -1.1
TRAPPC13-210ENST00000509234 CEP126Q9P2H0 1117 aa8.21□□□□□ -1.1
TRAPPC13-210ENST00000509234 ATP9BO43861 1147 aa8.2□□□□□ -1.1
TRAPPC13-210ENST00000509234 WNT7BP56706 349 aa8.2□□□□□ -1.1
TRAPPC13-210ENST00000509234 MYT1Q01538 1121 aa8.2□□□□□ -1.1
TRAPPC13-210ENST00000509234 TFIP11Q9UBB9 837 aaKnown RBP8.2□□□□□ -1.1
TRAPPC13-210ENST00000509234 PBXIP1Q96AQ6 731 aa8.19□□□□□ -1.1
TRAPPC13-210ENST00000509234 SHROOM4Q9ULL8 1493 aa8.19□□□□□ -1.1
TRAPPC13-210ENST00000509234 ESPNB1AK53 854 aa8.18□□□□□ -1.1
TRAPPC13-210ENST00000509234 LIAT1Q6ZQX7 453 aa8.18□□□□□ -1.1
TRAPPC13-210ENST00000509234 PLEKHM2Q8IWE5 1019 aa8.18□□□□□ -1.1
TRAPPC13-210ENST00000509234 DGAT1O75907 488 aa8.17□□□□□ -1.1
TRAPPC13-210ENST00000509234 ZBTB33Q86T24 672 aa8.17□□□□□ -1.1
TRAPPC13-210ENST00000509234 PCDHB9Q9Y5E1 797 aa8.17□□□□□ -1.1
TRAPPC13-210ENST00000509234 KANK4Q5T7N3 995 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC13-210ENST00000509234 MAP4K5Q9Y4K4 846 aa8.16□□□□□ -1.1
TRAPPC13-210ENST00000509234 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC13-210ENST00000509234 MAGEB6P1A0A0J9YX57 407 aa8.15□□□□□ -1.1
TRAPPC13-210ENST00000509234 ZBTB24O43167 697 aaPredicted RBP8.15□□□□□ -1.1
TRAPPC13-210ENST00000509234 VARSP26640 1264 aaKnown RBP8.15□□□□□ -1.1
TRAPPC13-210ENST00000509234 MPNDQ8N594 471 aa8.15□□□□□ -1.1
TRAPPC13-210ENST00000509234 CARD14Q9BXL6 1004 aa8.15□□□□□ -1.1
TRAPPC13-210ENST00000509234 USP17L5A8MUK1 530 aa8.14□□□□□ -1.11
TRAPPC13-210ENST00000509234 SIAH2O43255 324 aa8.14□□□□□ -1.11
TRAPPC13-210ENST00000509234 LMOD1P29536 600 aaPredicted RBP8.14□□□□□ -1.11
TRAPPC13-210ENST00000509234 TRIM67Q6ZTA4 783 aa8.14□□□□□ -1.11
TRAPPC13-210ENST00000509234 CDK15Q96Q40 435 aa8.14□□□□□ -1.11
TRAPPC13-210ENST00000509234 CDV3Q9UKY7 258 aaKnown RBP8.14□□□□□ -1.11
TRAPPC13-210ENST00000509234 USP17L3A6NCW0 530 aa8.13□□□□□ -1.11
TRAPPC13-210ENST00000509234 USP17L4A6NCW7 530 aa8.13□□□□□ -1.11
TRAPPC13-210ENST00000509234 GIGYF1O75420 1035 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC13-210ENST00000509234 ATG7O95352 703 aa8.13□□□□□ -1.11
TRAPPC13-210ENST00000509234 LCE2AQ5TA79 106 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC13-210ENST00000509234 USP17L2Q6R6M4 530 aa8.13□□□□□ -1.11
TRAPPC13-210ENST00000509234 USP17L1Q7RTZ2 530 aa8.13□□□□□ -1.11
TRAPPC13-210ENST00000509234 DZIP3Q86Y13 1208 aaKnown RBP8.13□□□□□ -1.11
TRAPPC13-210ENST00000509234 CCDC85AQ96PX6 553 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC13-210ENST00000509234 SCRIBQ14160 1630 aa8.13□□□□□ -1.11
TRAPPC13-210ENST00000509234 LZTS3O60299 673 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC13-210ENST00000509234 SKIP12755 728 aa8.12□□□□□ -1.11
TRAPPC13-210ENST00000509234 SLC19A1P41440 591 aa8.12□□□□□ -1.11
TRAPPC13-210ENST00000509234 MAP7D1Q3KQU3 841 aa8.12□□□□□ -1.11
TRAPPC13-210ENST00000509234 TSGA10IPQ3SY00 556 aa8.12□□□□□ -1.11
TRAPPC13-210ENST00000509234 RNF135Q8IUD6 432 aa8.12□□□□□ -1.11
TRAPPC13-210ENST00000509234 SEPT12Q8IYM1 358 aa8.12□□□□□ -1.11
TRAPPC13-210ENST00000509234 PLPP7Q8NBV4 271 aa8.12□□□□□ -1.11
TRAPPC13-210ENST00000509234 SLC10A4Q96EP9 437 aa8.12□□□□□ -1.11
TRAPPC13-210ENST00000509234 RFX1P22670 979 aa8.11□□□□□ -1.11
TRAPPC13-210ENST00000509234 AGERQ15109 404 aa8.11□□□□□ -1.11
TRAPPC13-210ENST00000509234 NBPF20Q3BBV1 942 aa8.11□□□□□ -1.11
TRAPPC13-210ENST00000509234 SLFNL1Q499Z3 407 aa8.11□□□□□ -1.11
TRAPPC13-210ENST00000509234 RC3H1Q5TC82 1133 aaKnown RBP8.11□□□□□ -1.11
TRAPPC13-210ENST00000509234 RETREG2Q8NC44 543 aa8.11□□□□□ -1.11
TRAPPC13-210ENST00000509234 WNT7AO00755 349 aa8.1□□□□□ -1.11
TRAPPC13-210ENST00000509234 CD2BP2O95400 341 aaKnown RBP8.1□□□□□ -1.11
TRAPPC13-210ENST00000509234 ELOAQ14241 798 aaKnown RBP8.1□□□□□ -1.11
TRAPPC13-210ENST00000509234 SPRYD7Q5W111 196 aa8.1□□□□□ -1.11
TRAPPC13-210ENST00000509234 CCDC125Q86Z20 511 aa8.1□□□□□ -1.11
TRAPPC13-210ENST00000509234 TRAIPQ9BWF2 469 aa8.1□□□□□ -1.11
TRAPPC13-210ENST00000509234 STK17AQ9UEE5 414 aa8.1□□□□□ -1.11
TRAPPC13-210ENST00000509234 NCOA4Q13772 614 aa8.09□□□□□ -1.11
TRAPPC13-210ENST00000509234 DKK1O94907 266 aa8.08□□□□□ -1.12
TRAPPC13-210ENST00000509234 GRM5P41594 1212 aa8.08□□□□□ -1.12
TRAPPC13-210ENST00000509234 INTS6LQ5JSJ4 861 aaKnown RBP8.08□□□□□ -1.12
TRAPPC13-210ENST00000509234 RNF20Q5VTR2 975 aa8.08□□□□□ -1.12
TRAPPC13-210ENST00000509234 KCTD15Q96SI1 283 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC13-210ENST00000509234 CC2D2AQ9P2K1 1620 aa8.07□□□□□ -1.12
TRAPPC13-210ENST00000509234 FAM187AA6NFU0 413 aa8.07□□□□□ -1.12
TRAPPC13-210ENST00000509234 TMEM88BA6NKF7 163 aa8.07□□□□□ -1.12
TRAPPC13-210ENST00000509234 FAM196BA6NMK8 535 aa8.07□□□□□ -1.12
TRAPPC13-210ENST00000509234 WFS1O76024 890 aa8.07□□□□□ -1.12
TRAPPC13-210ENST00000509234 DEPDC4Q8N2C3 294 aa8.07□□□□□ -1.12
TRAPPC13-210ENST00000509234 EHBP1Q8NDI1 1231 aa8.07□□□□□ -1.12
TRAPPC13-210ENST00000509234 ZMIZ1Q9ULJ6 1067 aa8.07□□□□□ -1.12
TRAPPC13-210ENST00000509234 USTQ9Y2C2 406 aa8.07□□□□□ -1.12
TRAPPC13-210ENST00000509234 EIF4G1Q04637 1599 aaKnown RBP8.06□□□□□ -1.12
TRAPPC13-210ENST00000509234 PTK7Q13308 1070 aa8.06□□□□□ -1.12
TRAPPC13-210ENST00000509234 ZNF598Q86UK7 904 aaKnown RBP8.06□□□□□ -1.12
TRAPPC13-210ENST00000509234 CDCA7Q9BWT1 371 aaPredicted RBP8.06□□□□□ -1.12
TRAPPC13-210ENST00000509234 VRTNQ9H8Y1 702 aa8.06□□□□□ -1.12
TRAPPC13-210ENST00000509234 PKD2L1Q9P0L9 805 aa8.06□□□□□ -1.12
TRAPPC13-210ENST00000509234 MKRN1Q9UHC7 482 aaKnown RBP8.06□□□□□ -1.12
TRAPPC13-210ENST00000509234 ATP5J2-PTCD1G3V325 749 aa8.05□□□□□ -1.12
TRAPPC13-210ENST00000509234 CRTC2Q53ET0 693 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC13-210ENST00000509234 MRGPRX2Q96LB1 330 aa8.05□□□□□ -1.12
TRAPPC13-210ENST00000509234 DOLKQ9UPQ8 538 aa8.05□□□□□ -1.12
TRAPPC13-210ENST00000509234 TLL2Q9Y6L7 1015 aa8.05□□□□□ -1.12
TRAPPC13-210ENST00000509234 ZBTB7BO15156 539 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC13-210ENST00000509234 ST8SIA5O15466 376 aa8.04□□□□□ -1.12
TRAPPC13-210ENST00000509234 CLDN10P78369 228 aa8.04□□□□□ -1.12
TRAPPC13-210ENST00000509234 PRR20EP86478 221 aa8.04□□□□□ -1.12
TRAPPC13-210ENST00000509234 PRR20CP86479 221 aa8.04□□□□□ -1.12
TRAPPC13-210ENST00000509234 PRR20DP86480 221 aa8.04□□□□□ -1.12
TRAPPC13-210ENST00000509234 PRR20BP86481 221 aa8.04□□□□□ -1.12
TRAPPC13-210ENST00000509234 PRR20AP86496 221 aa8.04□□□□□ -1.12
TRAPPC13-210ENST00000509234 EML3Q32P44 896 aa8.04□□□□□ -1.12
TRAPPC13-210ENST00000509234 VASH1Q7L8A9 365 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC13-210ENST00000509234 AAASQ9NRG9 546 aa8.04□□□□□ -1.12
TRAPPC13-210ENST00000509234 ACIN1Q9UKV3 1341 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms