RNA–Protein interactions for RNA: ENST00000509085.5

HMGCR-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best)

Gene HMGCR, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-207ENST00000509085 NBPF1Q3BBV0 1214 aa12.64□□□□□ -0.39
HMGCR-207ENST00000509085 CABP2Q9NPB3 220 aa12.64□□□□□ -0.39
HMGCR-207ENST00000509085 COL18A1P39060 1754 aa12.64□□□□□ -0.39
HMGCR-207ENST00000509085 ABCC6O95255 1503 aa12.63□□□□□ -0.39
HMGCR-207ENST00000509085 DDB1Q16531 1140 aa12.63□□□□□ -0.39
HMGCR-207ENST00000509085 EVC2Q86UK5 1308 aa12.62□□□□□ -0.39
HMGCR-207ENST00000509085 WDR17Q8IZU2 1322 aa12.62□□□□□ -0.39
HMGCR-207ENST00000509085 CPSF1Q10570 1443 aaKnown RBP12.62□□□□□ -0.39
HMGCR-207ENST00000509085 YY1P25490 414 aa12.62□□□□□ -0.39
HMGCR-207ENST00000509085 TOM1L2Q6ZVM7 507 aa12.62□□□□□ -0.39
HMGCR-207ENST00000509085 KCNH5Q8NCM2 988 aa12.62□□□□□ -0.39
HMGCR-207ENST00000509085 BCL11BQ9C0K0 894 aaPredicted RBP12.62□□□□□ -0.39
HMGCR-207ENST00000509085 CABP1Q9NZU7 370 aa12.62□□□□□ -0.39
HMGCR-207ENST00000509085 CASZ1Q86V15 1759 aa12.61□□□□□ -0.39
HMGCR-207ENST00000509085 ZNF692Q9BU19 519 aaPredicted RBP12.61□□□□□ -0.39
HMGCR-207ENST00000509085 ZBTB7CA1YPR0 619 aa12.6□□□□□ -0.39
HMGCR-207ENST00000509085 TTC21AQ8NDW8 1320 aa12.6□□□□□ -0.39
HMGCR-207ENST00000509085 CCDC7Q96M83 1385 aa12.58□□□□□ -0.4
HMGCR-207ENST00000509085 ARHGEF25Q86VW2 580 aa12.58□□□□□ -0.4
HMGCR-207ENST00000509085 CARD10Q9BWT7 1032 aa12.58□□□□□ -0.4
HMGCR-207ENST00000509085 RGPD5Q99666 1765 aa12.58□□□□□ -0.4
HMGCR-207ENST00000509085 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
HMGCR-207ENST00000509085 TTC21BQ7Z4L5 1316 aa12.57□□□□□ -0.4
HMGCR-207ENST00000509085 NFAT5O94916 1531 aa12.57□□□□□ -0.4
HMGCR-207ENST00000509085 TNS2Q63HR2 1409 aa12.56□□□□□ -0.4
HMGCR-207ENST00000509085 CSB-PGBD3P0DP91 1061 aa12.56□□□□□ -0.4
HMGCR-207ENST00000509085 MARCH10Q8NA82 808 aaPredicted RBP12.56□□□□□ -0.4
HMGCR-207ENST00000509085 ANO8Q9HCE9 1232 aaPredicted RBP12.56□□□□□ -0.4
HMGCR-207ENST00000509085 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
HMGCR-207ENST00000509085 MON2Q7Z3U7 1717 aa12.56□□□□□ -0.4
HMGCR-207ENST00000509085 NHSQ6T4R5 1651 aa12.55□□□□□ -0.4
HMGCR-207ENST00000509085 EXOC5O00471 708 aa12.55□□□□□ -0.4
HMGCR-207ENST00000509085 STK32BQ9NY57 414 aa12.55□□□□□ -0.4
HMGCR-207ENST00000509085 ROCK2O75116 1388 aaKnown RBP12.55□□□□□ -0.4
HMGCR-207ENST00000509085 L3MBTL2Q969R5 705 aa12.54□□□□□ -0.4
HMGCR-207ENST00000509085 MYOM1P52179 1685 aa12.54□□□□□ -0.4
HMGCR-207ENST00000509085 KTN1Q86UP2 1357 aaKnown RBP12.54□□□□□ -0.4
HMGCR-207ENST00000509085 SBNO2Q9Y2G9 1366 aa12.54□□□□□ -0.4
HMGCR-207ENST00000509085 TXNRD1Q16881 649 aa12.53□□□□□ -0.4
HMGCR-207ENST00000509085 SLC15A2Q16348 729 aa12.52□□□□□ -0.41
HMGCR-207ENST00000509085 PROM2Q8N271 834 aa12.52□□□□□ -0.41
HMGCR-207ENST00000509085 USP31Q70CQ4 1352 aa12.52□□□□□ -0.41
HMGCR-207ENST00000509085 PTF1AQ7RTS3 328 aa12.51□□□□□ -0.41
HMGCR-207ENST00000509085 MTFR1LQ9H019 292 aa12.51□□□□□ -0.41
HMGCR-207ENST00000509085 LTN1O94822 1766 aa12.51□□□□□ -0.41
HMGCR-207ENST00000509085 SOX12O15370 315 aa12.5□□□□□ -0.41
HMGCR-207ENST00000509085 ZBTB7AO95365 584 aa12.5□□□□□ -0.41
HMGCR-207ENST00000509085 PTGER2P43116 358 aa12.5□□□□□ -0.41
HMGCR-207ENST00000509085 ERBB3P21860 1342 aa12.5□□□□□ -0.41
HMGCR-207ENST00000509085 PAPPAQ13219 1627 aa12.5□□□□□ -0.41
HMGCR-207ENST00000509085 FAM208AQ9UK61 1670 aaKnown RBP12.49□□□□□ -0.41
HMGCR-207ENST00000509085 BTAF1O14981 1849 aa12.48□□□□□ -0.41
HMGCR-207ENST00000509085 MAP3K5Q99683 1374 aa12.48□□□□□ -0.41
HMGCR-207ENST00000509085 IL2RBP14784 551 aa12.48□□□□□ -0.41
HMGCR-207ENST00000509085 PDGFDQ9GZP0 370 aaPredicted RBP12.48□□□□□ -0.41
HMGCR-207ENST00000509085 CHD4Q14839 1912 aa12.48□□□□□ -0.41
HMGCR-207ENST00000509085 EDC4Q6P2E9 1401 aaKnown RBP12.47□□□□□ -0.41
HMGCR-207ENST00000509085 HDGFL2Q7Z4V5 671 aaPredicted RBP12.47□□□□□ -0.41
HMGCR-207ENST00000509085 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
HMGCR-207ENST00000509085 QSER1Q2KHR3 1735 aa12.47□□□□□ -0.41
HMGCR-207ENST00000509085 SYT17Q9BSW7 474 aa12.46□□□□□ -0.41
HMGCR-207ENST00000509085 FHDC1Q9C0D6 1143 aaPredicted RBP12.46□□□□□ -0.41
HMGCR-207ENST00000509085 NLRP2Q9NX02 1062 aa12.46□□□□□ -0.41
HMGCR-207ENST00000509085 CD163L1Q9NR16 1453 aa12.46□□□□□ -0.42
HMGCR-207ENST00000509085 POTEDQ86YR6 584 aa12.45□□□□□ -0.42
HMGCR-207ENST00000509085 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.42
HMGCR-207ENST00000509085 SGIP1Q9BQI5 828 aa12.45□□□□□ -0.42
HMGCR-207ENST00000509085 SLC27A3Q5K4L6 730 aa12.44□□□□□ -0.42
HMGCR-207ENST00000509085 ANKRD24Q8TF21 1146 aa12.44□□□□□ -0.42
HMGCR-207ENST00000509085 PUS7Q96PZ0 661 aaKnown RBP12.44□□□□□ -0.42
HMGCR-207ENST00000509085 ARXQ96QS3 562 aa12.44□□□□□ -0.42
HMGCR-207ENST00000509085 TERF2IPQ9NYB0 399 aa12.44□□□□□ -0.42
HMGCR-207ENST00000509085 KAT6BQ8WYB5 2073 aa12.44□□□□□ -0.42
HMGCR-207ENST00000509085 NME9Q86XW9 330 aa12.43□□□□□ -0.42
HMGCR-207ENST00000509085 ZNF784Q8NCA9 323 aaPredicted RBP12.43□□□□□ -0.42
HMGCR-207ENST00000509085 SLC16A10Q8TF71 515 aa12.43□□□□□ -0.42
HMGCR-207ENST00000509085 ACSBG1Q96GR2 724 aa12.43□□□□□ -0.42
HMGCR-207ENST00000509085 SIN3AQ96ST3 1273 aa12.43□□□□□ -0.42
HMGCR-207ENST00000509085 CARD11Q9BXL7 1154 aa12.43□□□□□ -0.42
HMGCR-207ENST00000509085 UTRNP46939 3433 aa12.43□□□□□ -0.42
HMGCR-207ENST00000509085 COL24A1Q17RW2 1714 aa12.42□□□□□ -0.42
HMGCR-207ENST00000509085 NEUROD1Q13562 356 aa12.42□□□□□ -0.42
HMGCR-207ENST00000509085 TMC1Q8TDI8 760 aa12.42□□□□□ -0.42
HMGCR-207ENST00000509085 A0A1W2PP64 1363 aa12.41□□□□□ -0.42
HMGCR-207ENST00000509085 SLC24A1O60721 1099 aa12.4□□□□□ -0.42
HMGCR-207ENST00000509085 IP6K1Q92551 441 aa12.4□□□□□ -0.42
HMGCR-207ENST00000509085 POLD1P28340 1107 aa12.39□□□□□ -0.43
HMGCR-207ENST00000509085 ZNF827Q17R98 1081 aa12.39□□□□□ -0.43
HMGCR-207ENST00000509085 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
HMGCR-207ENST00000509085 ANKRD36BQ8N2N9 1353 aa12.39□□□□□ -0.43
HMGCR-207ENST00000509085 DOT1LQ8TEK3 1739 aa12.39□□□□□ -0.43
HMGCR-207ENST00000509085 LY75O60449 1722 aa12.38□□□□□ -0.43
HMGCR-207ENST00000509085 HMGB2P26583 209 aaKnown RBP12.38□□□□□ -0.43
HMGCR-207ENST00000509085 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
HMGCR-207ENST00000509085 LRRC4BQ9NT99 713 aa12.38□□□□□ -0.43
HMGCR-207ENST00000509085 TUBGCP6Q96RT7 1819 aa12.37□□□□□ -0.43
HMGCR-207ENST00000509085 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
HMGCR-207ENST00000509085 TONSLQ96HA7 1378 aa12.36□□□□□ -0.43
HMGCR-207ENST00000509085 GPR162Q16538 588 aa12.36□□□□□ -0.43
HMGCR-207ENST00000509085 DDX54Q8TDD1 881 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms