RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 TERF2IPQ9NYB0 399 aa20.81■□□□□ 0.92
UBE2D3-228ENST00000508974 CLSPNQ9HAW4 1339 aa20.8■□□□□ 0.92
UBE2D3-228ENST00000508974 CRB1P82279 1406 aa20.8■□□□□ 0.92
UBE2D3-228ENST00000508974 EDC4Q6P2E9 1401 aaKnown RBP20.8■□□□□ 0.92
UBE2D3-228ENST00000508974 TCP11L2Q8N4U5 519 aa20.8■□□□□ 0.92
UBE2D3-228ENST00000508974 AXIN2Q9Y2T1 843 aa20.8■□□□□ 0.92
UBE2D3-228ENST00000508974 WNK3Q9BYP7 1800 aa20.8■□□□□ 0.92
UBE2D3-228ENST00000508974 ARHGEF25Q86VW2 580 aa20.79■□□□□ 0.92
UBE2D3-228ENST00000508974 TNS1Q9HBL0 1735 aaKnown RBP20.78■□□□□ 0.92
UBE2D3-228ENST00000508974 PARP4Q9UKK3 1724 aaKnown RBP20.78■□□□□ 0.92
UBE2D3-228ENST00000508974 BARGINQ6ZT62 677 aa20.78■□□□□ 0.92
UBE2D3-228ENST00000508974 TOM1L2Q6ZVM7 507 aa20.78■□□□□ 0.92
UBE2D3-228ENST00000508974 TMF1P82094 1093 aa20.77■□□□□ 0.92
UBE2D3-228ENST00000508974 PUS7Q96PZ0 661 aaKnown RBP20.77■□□□□ 0.92
UBE2D3-228ENST00000508974 USP31Q70CQ4 1352 aa20.76■□□□□ 0.91
UBE2D3-228ENST00000508974 TIMELESSQ9UNS1 1208 aa20.76■□□□□ 0.91
UBE2D3-228ENST00000508974 LRRC37A3O60309 1634 aa20.75■□□□□ 0.91
UBE2D3-228ENST00000508974 CSB-PGBD3P0DP91 1061 aa20.75■□□□□ 0.91
UBE2D3-228ENST00000508974 PDE3BQ13370 1112 aa20.75■□□□□ 0.91
UBE2D3-228ENST00000508974 NINLQ9Y2I6 1382 aa20.74■□□□□ 0.91
UBE2D3-228ENST00000508974 SLC24A1O60721 1099 aa20.74■□□□□ 0.91
UBE2D3-228ENST00000508974 THRAP3Q9Y2W1 955 aaKnown RBP20.74■□□□□ 0.91
UBE2D3-228ENST00000508974 WDR17Q8IZU2 1322 aa20.74■□□□□ 0.91
UBE2D3-228ENST00000508974 OVOS2A0A0J9YW53 1432 aa20.73■□□□□ 0.91
UBE2D3-228ENST00000508974 OVOS2Q6IE36 1432 aa20.73■□□□□ 0.91
UBE2D3-228ENST00000508974 MYOM1P52179 1685 aa20.73■□□□□ 0.91
UBE2D3-228ENST00000508974 TRIM37O94972 964 aa20.72■□□□□ 0.91
UBE2D3-228ENST00000508974 BAG6P46379 1132 aa20.72■□□□□ 0.91
UBE2D3-228ENST00000508974 ANKRD36BQ8N2N9 1353 aa20.71■□□□□ 0.91
UBE2D3-228ENST00000508974 ABCC6O95255 1503 aa20.7■□□□□ 0.9
UBE2D3-228ENST00000508974 KIF20BQ96Q89 1820 aa20.7■□□□□ 0.9
UBE2D3-228ENST00000508974 EN1Q05925 392 aaPredicted RBP20.7■□□□□ 0.9
UBE2D3-228ENST00000508974 FAM196AQ6ZSG2 479 aa20.7■□□□□ 0.9
UBE2D3-228ENST00000508974 COG3Q96JB2 828 aa20.67■□□□□ 0.9
UBE2D3-228ENST00000508974 PEAK1Q9H792 1746 aa20.67■□□□□ 0.9
UBE2D3-228ENST00000508974 DDB1Q16531 1140 aa20.66■□□□□ 0.9
UBE2D3-228ENST00000508974 CDCA8Q53HL2 280 aa20.66■□□□□ 0.9
UBE2D3-228ENST00000508974 POLR3GLQ9BT43 218 aa20.66■□□□□ 0.9
UBE2D3-228ENST00000508974 SBF2Q86WG5 1849 aa20.66■□□□□ 0.9
UBE2D3-228ENST00000508974 FBLN1P23142 703 aa20.65■□□□□ 0.9
UBE2D3-228ENST00000508974 CARD10Q9BWT7 1032 aa20.65■□□□□ 0.9
UBE2D3-228ENST00000508974 NLRP2Q9NX02 1062 aa20.65■□□□□ 0.9
UBE2D3-228ENST00000508974 ERBB3P21860 1342 aa20.64■□□□□ 0.89
UBE2D3-228ENST00000508974 APBA3O96018 575 aa20.64■□□□□ 0.89
UBE2D3-228ENST00000508974 EZH2Q15910 746 aaKnown RBP20.64■□□□□ 0.89
UBE2D3-228ENST00000508974 ANKRD24Q8TF21 1146 aa20.64■□□□□ 0.89
UBE2D3-228ENST00000508974 GGNBP2Q9H3C7 697 aa20.64■□□□□ 0.89
UBE2D3-228ENST00000508974 OVOS2A0A0G2JMS6 1433 aa20.63■□□□□ 0.89
UBE2D3-228ENST00000508974 LTV1Q96GA3 475 aaPredicted RBP20.63■□□□□ 0.89
UBE2D3-228ENST00000508974 DISP2A7MBM2 1401 aa20.62■□□□□ 0.89
UBE2D3-228ENST00000508974 RGPD2P0DJD1 1756 aa20.62■□□□□ 0.89
UBE2D3-228ENST00000508974 CCDC7Q96M83 1385 aa20.62■□□□□ 0.89
UBE2D3-228ENST00000508974 PSDA5PKW4 1024 aaPredicted RBP20.62■□□□□ 0.89
UBE2D3-228ENST00000508974 FAM208AQ9UK61 1670 aaKnown RBP20.61■□□□□ 0.89
UBE2D3-228ENST00000508974 FYB1O15117 783 aa20.6■□□□□ 0.89
UBE2D3-228ENST00000508974 CDCA7Q9BWT1 371 aaPredicted RBP20.6■□□□□ 0.89
UBE2D3-228ENST00000508974 RREB1Q92766 1687 aa20.6■□□□□ 0.89
UBE2D3-228ENST00000508974 SRCAPQ6ZRS2 3230 aa20.59■□□□□ 0.89
UBE2D3-228ENST00000508974 MAP3K19Q56UN5 1328 aa20.59■□□□□ 0.89
UBE2D3-228ENST00000508974 HSPA5P11021 654 aaKnown RBP20.59■□□□□ 0.89
UBE2D3-228ENST00000508974 MARCH10Q8NA82 808 aaPredicted RBP20.59■□□□□ 0.89
UBE2D3-228ENST00000508974 NSD3Q9BZ95 1437 aa20.59■□□□□ 0.89
UBE2D3-228ENST00000508974 NUP188Q5SRE5 1749 aa20.58■□□□□ 0.89
UBE2D3-228ENST00000508974 AMPHP49418 695 aa20.58■□□□□ 0.89
UBE2D3-228ENST00000508974 EIF4G2P78344 907 aaKnown RBP eCLIP20.58■□□□□ 0.89
UBE2D3-228ENST00000508974 RRS1Q15050 365 aaKnown RBP20.58■□□□□ 0.89
UBE2D3-228ENST00000508974 IP6K1Q92551 441 aa20.58■□□□□ 0.89
UBE2D3-228ENST00000508974 EXOC5O00471 708 aa20.57■□□□□ 0.88
UBE2D3-228ENST00000508974 TNS2Q63HR2 1409 aa20.57■□□□□ 0.88
UBE2D3-228ENST00000508974 CAMKK2Q96RR4 588 aa20.57■□□□□ 0.88
UBE2D3-228ENST00000508974 CARD14Q9BXL6 1004 aa20.57■□□□□ 0.88
UBE2D3-228ENST00000508974 HOXC9P31274 260 aa20.56■□□□□ 0.88
UBE2D3-228ENST00000508974 PTF1AQ7RTS3 328 aa20.55■□□□□ 0.88
UBE2D3-228ENST00000508974 IL2RBP14784 551 aa20.54■□□□□ 0.88
UBE2D3-228ENST00000508974 R3HDM1Q15032 1099 aaKnown RBP20.54■□□□□ 0.88
UBE2D3-228ENST00000508974 C11orf95C9JLR9 678 aaPredicted RBP20.52■□□□□ 0.88
UBE2D3-228ENST00000508974 PARD3Q8TEW0 1356 aa20.51■□□□□ 0.87
UBE2D3-228ENST00000508974 RTL1A6NKG5 1358 aa20.5■□□□□ 0.87
UBE2D3-228ENST00000508974 RGPD3A6NKT7 1758 aaPredicted RBP20.5■□□□□ 0.87
UBE2D3-228ENST00000508974 RGPD4Q7Z3J3 1758 aa20.5■□□□□ 0.87
UBE2D3-228ENST00000508974 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
UBE2D3-228ENST00000508974 NHSQ6T4R5 1651 aa20.5■□□□□ 0.87
UBE2D3-228ENST00000508974 KAT6BQ8WYB5 2073 aa20.5■□□□□ 0.87
UBE2D3-228ENST00000508974 ACSBG1Q96GR2 724 aa20.49■□□□□ 0.87
UBE2D3-228ENST00000508974 BCL11BQ9C0K0 894 aaPredicted RBP20.49■□□□□ 0.87
UBE2D3-228ENST00000508974 ANKRD26Q9UPS8 1709 aa20.49■□□□□ 0.87
UBE2D3-228ENST00000508974 MAP2P11137 1827 aaKnown RBP20.48■□□□□ 0.87
UBE2D3-228ENST00000508974 USHBP1Q8N6Y0 703 aa20.48■□□□□ 0.87
UBE2D3-228ENST00000508974 SHANK3Q9BYB0 1731 aa20.47■□□□□ 0.87
UBE2D3-228ENST00000508974 LRP5O75197 1615 aa20.46■□□□□ 0.87
UBE2D3-228ENST00000508974 BCL9O00512 1426 aa20.46■□□□□ 0.87
UBE2D3-228ENST00000508974 SMG6Q86US8 1419 aaKnown RBP20.46■□□□□ 0.87
UBE2D3-228ENST00000508974 PPM1GO15355 546 aaPredicted RBP20.46■□□□□ 0.87
UBE2D3-228ENST00000508974 KCNQ2O43526 872 aa20.46■□□□□ 0.87
UBE2D3-228ENST00000508974 HSP90AB2PQ58FF8 381 aa20.46■□□□□ 0.87
UBE2D3-228ENST00000508974 EMILIN1Q9Y6C2 1016 aa20.46■□□□□ 0.87
UBE2D3-228ENST00000508974 CGNL1Q0VF96 1302 aa20.46■□□□□ 0.87
UBE2D3-228ENST00000508974 MEGF6O75095 1541 aa20.45■□□□□ 0.86
UBE2D3-228ENST00000508974 DDX54Q8TDD1 881 aaKnown RBP20.45■□□□□ 0.86
UBE2D3-228ENST00000508974 BTAF1O14981 1849 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms