RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 PARP4Q9UKK3 1724 aaKnown RBP31.11■■■□□ 2.57
PACRGL-220ENST00000508952 SRCAPQ6ZRS2 3230 aa31.1■■■□□ 2.57
PACRGL-220ENST00000508952 EDC4Q6P2E9 1401 aaKnown RBP31.1■■■□□ 2.57
PACRGL-220ENST00000508952 USP31Q70CQ4 1352 aa31.1■■■□□ 2.57
PACRGL-220ENST00000508952 TERF2IPQ9NYB0 399 aa31.1■■■□□ 2.57
PACRGL-220ENST00000508952 USP47Q96K76 1375 aa31.09■■■□□ 2.57
PACRGL-220ENST00000508952 PDE3BQ13370 1112 aa31.09■■■□□ 2.57
PACRGL-220ENST00000508952 FAM196AQ6ZSG2 479 aa31.08■■■□□ 2.57
PACRGL-220ENST00000508952 TOM1L2Q6ZVM7 507 aa31.08■■■□□ 2.57
PACRGL-220ENST00000508952 WDR17Q8IZU2 1322 aa31.07■■■□□ 2.56
PACRGL-220ENST00000508952 WNK3Q9BYP7 1800 aa31.06■■■□□ 2.56
PACRGL-220ENST00000508952 TRIM37O94972 964 aa31.05■■■□□ 2.56
PACRGL-220ENST00000508952 EN1Q05925 392 aaPredicted RBP31.05■■■□□ 2.56
PACRGL-220ENST00000508952 LTN1O94822 1766 aa31.05■■■□□ 2.56
PACRGL-220ENST00000508952 LRRC37A3O60309 1634 aa31.04■■■□□ 2.56
PACRGL-220ENST00000508952 NINLQ9Y2I6 1382 aa31.03■■■□□ 2.56
PACRGL-220ENST00000508952 SLC24A1O60721 1099 aa31.02■■■□□ 2.56
PACRGL-220ENST00000508952 ABCC6O95255 1503 aa31.02■■■□□ 2.56
PACRGL-220ENST00000508952 CLSPNQ9HAW4 1339 aa31.01■■■□□ 2.56
PACRGL-220ENST00000508952 CSB-PGBD3P0DP91 1061 aa31.01■■■□□ 2.55
PACRGL-220ENST00000508952 DISP2A7MBM2 1401 aa31■■■□□ 2.55
PACRGL-220ENST00000508952 OVOS2A0A0J9YW53 1432 aa30.99■■■□□ 2.55
PACRGL-220ENST00000508952 OVOS2Q6IE36 1432 aa30.99■■■□□ 2.55
PACRGL-220ENST00000508952 TIMELESSQ9UNS1 1208 aa30.98■■■□□ 2.55
PACRGL-220ENST00000508952 TMF1P82094 1093 aa30.97■■■□□ 2.55
PACRGL-220ENST00000508952 PEAK1Q9H792 1746 aa30.96■■■□□ 2.55
PACRGL-220ENST00000508952 CARD10Q9BWT7 1032 aa30.96■■■□□ 2.55
PACRGL-220ENST00000508952 EZH2Q15910 746 aaKnown RBP30.95■■■□□ 2.55
PACRGL-220ENST00000508952 DDB1Q16531 1140 aa30.95■■■□□ 2.55
PACRGL-220ENST00000508952 APBA3O96018 575 aa30.94■■■□□ 2.54
PACRGL-220ENST00000508952 ANKRD36BQ8N2N9 1353 aa30.93■■■□□ 2.54
PACRGL-220ENST00000508952 OVOS2A0A0G2JMS6 1433 aa30.92■■■□□ 2.54
PACRGL-220ENST00000508952 PSDA5PKW4 1024 aaPredicted RBP30.91■■■□□ 2.54
PACRGL-220ENST00000508952 CAMKK2Q96RR4 588 aa30.91■■■□□ 2.54
PACRGL-220ENST00000508952 SBF2Q86WG5 1849 aa30.9■■■□□ 2.54
PACRGL-220ENST00000508952 CDCA7Q9BWT1 371 aaPredicted RBP30.9■■■□□ 2.54
PACRGL-220ENST00000508952 ERBB3P21860 1342 aa30.9■■■□□ 2.54
PACRGL-220ENST00000508952 CCDC7Q96M83 1385 aa30.9■■■□□ 2.54
PACRGL-220ENST00000508952 COG3Q96JB2 828 aa30.87■■■□□ 2.53
PACRGL-220ENST00000508952 RREB1Q92766 1687 aa30.87■■■□□ 2.53
PACRGL-220ENST00000508952 MARCH10Q8NA82 808 aaPredicted RBP30.86■■■□□ 2.53
PACRGL-220ENST00000508952 ANKRD24Q8TF21 1146 aa30.86■■■□□ 2.53
PACRGL-220ENST00000508952 NLRP2Q9NX02 1062 aa30.86■■■□□ 2.53
PACRGL-220ENST00000508952 MYOM1P52179 1685 aa30.85■■■□□ 2.53
PACRGL-220ENST00000508952 CCER1Q8TC90 406 aaPredicted RBP30.85■■■□□ 2.53
PACRGL-220ENST00000508952 PARD3Q8TEW0 1356 aa30.84■■■□□ 2.53
PACRGL-220ENST00000508952 C11orf95C9JLR9 678 aaPredicted RBP30.84■■■□□ 2.53
PACRGL-220ENST00000508952 CDCA8Q53HL2 280 aa30.84■■■□□ 2.53
PACRGL-220ENST00000508952 FBLN1P23142 703 aa30.83■■■□□ 2.53
PACRGL-220ENST00000508952 NUP188Q5SRE5 1749 aa30.83■■■□□ 2.53
PACRGL-220ENST00000508952 R3HDM1Q15032 1099 aaKnown RBP30.82■■■□□ 2.52
PACRGL-220ENST00000508952 IP6K1Q92551 441 aa30.81■■■□□ 2.52
PACRGL-220ENST00000508952 TNS2Q63HR2 1409 aa30.81■■■□□ 2.52
PACRGL-220ENST00000508952 KIF20BQ96Q89 1820 aa30.8■■■□□ 2.52
PACRGL-220ENST00000508952 EXOC5O00471 708 aa30.8■■■□□ 2.52
PACRGL-220ENST00000508952 MAP3K19Q56UN5 1328 aa30.79■■■□□ 2.52
PACRGL-220ENST00000508952 FYB1O15117 783 aa30.79■■■□□ 2.52
PACRGL-220ENST00000508952 PTF1AQ7RTS3 328 aa30.79■■■□□ 2.52
PACRGL-220ENST00000508952 GGNBP2Q9H3C7 697 aa30.79■■■□□ 2.52
PACRGL-220ENST00000508952 LTV1Q96GA3 475 aaPredicted RBP30.78■■■□□ 2.52
PACRGL-220ENST00000508952 LRP5O75197 1615 aa30.77■■■□□ 2.52
PACRGL-220ENST00000508952 FAM208AQ9UK61 1670 aaKnown RBP30.77■■■□□ 2.52
PACRGL-220ENST00000508952 BCL9O00512 1426 aa30.76■■■□□ 2.51
PACRGL-220ENST00000508952 IL2RBP14784 551 aa30.75■■■□□ 2.51
PACRGL-220ENST00000508952 HOXC9P31274 260 aa30.74■■■□□ 2.51
PACRGL-220ENST00000508952 BCL11BQ9C0K0 894 aaPredicted RBP30.74■■■□□ 2.51
PACRGL-220ENST00000508952 RGPD3A6NKT7 1758 aaPredicted RBP30.74■■■□□ 2.51
PACRGL-220ENST00000508952 RGPD4Q7Z3J3 1758 aa30.74■■■□□ 2.51
PACRGL-220ENST00000508952 AMPHP49418 695 aa30.73■■■□□ 2.51
PACRGL-220ENST00000508952 RGPD2P0DJD1 1756 aa30.72■■■□□ 2.51
PACRGL-220ENST00000508952 RRS1Q15050 365 aaKnown RBP30.72■■■□□ 2.51
PACRGL-220ENST00000508952 CARD14Q9BXL6 1004 aa30.72■■■□□ 2.51
PACRGL-220ENST00000508952 NSD3Q9BZ95 1437 aa30.71■■■□□ 2.51
PACRGL-220ENST00000508952 PLSCR1O15162 318 aa30.68■■■□□ 2.5
PACRGL-220ENST00000508952 RTL1A6NKG5 1358 aa30.67■■■□□ 2.5
PACRGL-220ENST00000508952 POLR3GLQ9BT43 218 aa30.67■■■□□ 2.5
PACRGL-220ENST00000508952 NHSQ6T4R5 1651 aa30.67■■■□□ 2.5
PACRGL-220ENST00000508952 NBPF14Q5TI25 921 aa30.66■■■□□ 2.5
PACRGL-220ENST00000508952 KCNQ2O43526 872 aa30.65■■■□□ 2.5
PACRGL-220ENST00000508952 HSPA5P11021 654 aaKnown RBP30.65■■■□□ 2.5
PACRGL-220ENST00000508952 EIF4G2P78344 907 aaKnown RBP eCLIP30.64■■■□□ 2.5
PACRGL-220ENST00000508952 ACSBG1Q96GR2 724 aa30.63■■■□□ 2.49
PACRGL-220ENST00000508952 KAT6BQ8WYB5 2073 aa30.6■■■□□ 2.49
PACRGL-220ENST00000508952 PROM2Q8N271 834 aa30.59■■■□□ 2.49
PACRGL-220ENST00000508952 MEGF6O75095 1541 aa30.57■■■□□ 2.49
PACRGL-220ENST00000508952 SMG6Q86US8 1419 aaKnown RBP30.57■■■□□ 2.48
PACRGL-220ENST00000508952 BTAF1O14981 1849 aa30.57■■■□□ 2.48
PACRGL-220ENST00000508952 NBPF6Q5VWK0 638 aa30.57■■■□□ 2.48
PACRGL-220ENST00000508952 USHBP1Q8N6Y0 703 aa30.57■■■□□ 2.48
PACRGL-220ENST00000508952 DDX54Q8TDD1 881 aaKnown RBP30.57■■■□□ 2.48
PACRGL-220ENST00000508952 NBPF4Q96M43 638 aa30.57■■■□□ 2.48
PACRGL-220ENST00000508952 ANO8Q9HCE9 1232 aaPredicted RBP30.57■■■□□ 2.48
PACRGL-220ENST00000508952 SHANK3Q9BYB0 1731 aa30.56■■■□□ 2.48
PACRGL-220ENST00000508952 FLT4P35916 1363 aa30.56■■■□□ 2.48
PACRGL-220ENST00000508952 HSP90AB2PQ58FF8 381 aa30.56■■■□□ 2.48
PACRGL-220ENST00000508952 INSRP06213 1382 aa30.55■■■□□ 2.48
PACRGL-220ENST00000508952 EMILIN1Q9Y6C2 1016 aa30.55■■■□□ 2.48
PACRGL-220ENST00000508952 CGNL1Q0VF96 1302 aa30.54■■■□□ 2.48
PACRGL-220ENST00000508952 TXNRD1Q16881 649 aa30.54■■■□□ 2.48
PACRGL-220ENST00000508952 KIF24Q5T7B8 1368 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms