RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 NFAT5O94916 1531 aa33.9■■■■□ 3.02
PROM1-209ENST00000508940 CRB1P82279 1406 aa33.9■■■■□ 3.02
PROM1-209ENST00000508940 SF3B2Q13435 895 aaKnown RBP33.9■■■■□ 3.02
PROM1-209ENST00000508940 COL18A1P39060 1754 aa33.9■■■■□ 3.02
PROM1-209ENST00000508940 CSB-PGBD3P0DP91 1061 aa33.89■■■■□ 3.02
PROM1-209ENST00000508940 COG3Q96JB2 828 aa33.89■■■■□ 3.02
PROM1-209ENST00000508940 USP54Q70EL1 1684 aa33.89■■■■□ 3.02
PROM1-209ENST00000508940 THSD7AQ9UPZ6 1657 aa33.89■■■■□ 3.02
PROM1-209ENST00000508940 BLMP54132 1417 aaPredicted RBP33.87■■■■□ 3.01
PROM1-209ENST00000508940 HSPA5P11021 654 aaKnown RBP33.87■■■■□ 3.01
PROM1-209ENST00000508940 WDR17Q8IZU2 1322 aa33.86■■■■□ 3.01
PROM1-209ENST00000508940 PDE3BQ13370 1112 aa33.85■■■■□ 3.01
PROM1-209ENST00000508940 POLR3GLQ9BT43 218 aa33.85■■■■□ 3.01
PROM1-209ENST00000508940 OVOS2A0A0J9YW53 1432 aa33.84■■■■□ 3.01
PROM1-209ENST00000508940 OVOS2Q6IE36 1432 aa33.84■■■■□ 3.01
PROM1-209ENST00000508940 FAM182BQ5T319 152 aa33.83■■■■□ 3.01
PROM1-209ENST00000508940 RGPD5Q99666 1765 aa33.82■■■■□ 3
PROM1-209ENST00000508940 ABCC6O95255 1503 aa33.8■■■■□ 3
PROM1-209ENST00000508940 FYB1O15117 783 aa33.78■■■■□ 3
PROM1-209ENST00000508940 FAM196AQ6ZSG2 479 aa33.78■■■■□ 3
PROM1-209ENST00000508940 CARD10Q9BWT7 1032 aa33.78■■■■□ 3
PROM1-209ENST00000508940 GGNBP2Q9H3C7 697 aa33.77■■■■□ 3
PROM1-209ENST00000508940 LTN1O94822 1766 aa33.77■■■■□ 3
PROM1-209ENST00000508940 EP400Q96L91 3159 aa33.76■■■■□ 3
PROM1-209ENST00000508940 CDCA7Q9BWT1 371 aaPredicted RBP33.74■■■□□ 2.99
PROM1-209ENST00000508940 DEFB132Q7Z7B7 95 aa33.73■■■□□ 2.99
PROM1-209ENST00000508940 MYOM1P52179 1685 aa33.72■■■□□ 2.99
PROM1-209ENST00000508940 BAG6P46379 1132 aa33.72■■■□□ 2.99
PROM1-209ENST00000508940 ANKRD24Q8TF21 1146 aa33.72■■■□□ 2.99
PROM1-209ENST00000508940 IP6K1Q92551 441 aa33.72■■■□□ 2.99
PROM1-209ENST00000508940 CARD14Q9BXL6 1004 aa33.72■■■□□ 2.99
PROM1-209ENST00000508940 DDB1Q16531 1140 aa33.71■■■□□ 2.99
PROM1-209ENST00000508940 NLRP2Q9NX02 1062 aa33.71■■■□□ 2.99
PROM1-209ENST00000508940 AMPHP49418 695 aa33.7■■■□□ 2.99
PROM1-209ENST00000508940 ERBB3P21860 1342 aa33.7■■■□□ 2.99
PROM1-209ENST00000508940 CCDC7Q96M83 1385 aa33.7■■■□□ 2.98
PROM1-209ENST00000508940 NSD3Q9BZ95 1437 aa33.7■■■□□ 2.98
PROM1-209ENST00000508940 PARP4Q9UKK3 1724 aaKnown RBP33.69■■■□□ 2.98
PROM1-209ENST00000508940 FBLN1P23142 703 aa33.68■■■□□ 2.98
PROM1-209ENST00000508940 MAP3K19Q56UN5 1328 aa33.68■■■□□ 2.98
PROM1-209ENST00000508940 C11orf95C9JLR9 678 aaPredicted RBP33.66■■■□□ 2.98
PROM1-209ENST00000508940 TRIM37O94972 964 aa33.66■■■□□ 2.98
PROM1-209ENST00000508940 KIF20BQ96Q89 1820 aa33.65■■■□□ 2.98
PROM1-209ENST00000508940 LTV1Q96GA3 475 aaPredicted RBP33.65■■■□□ 2.98
PROM1-209ENST00000508940 RGPD1P0DJD0 1748 aa33.64■■■□□ 2.98
PROM1-209ENST00000508940 CGNL1Q0VF96 1302 aa33.63■■■□□ 2.97
PROM1-209ENST00000508940 EXOC5O00471 708 aa33.63■■■□□ 2.97
PROM1-209ENST00000508940 HOXC9P31274 260 aa33.63■■■□□ 2.97
PROM1-209ENST00000508940 RRS1Q15050 365 aaKnown RBP33.62■■■□□ 2.97
PROM1-209ENST00000508940 WNK3Q9BYP7 1800 aa33.6■■■□□ 2.97
PROM1-209ENST00000508940 LRRC37A3O60309 1634 aa33.58■■■□□ 2.97
PROM1-209ENST00000508940 EN1Q05925 392 aaPredicted RBP33.58■■■□□ 2.97
PROM1-209ENST00000508940 PANK3Q9H999 370 aa33.58■■■□□ 2.97
PROM1-209ENST00000508940 OVOS2A0A0G2JMS6 1433 aa33.57■■■□□ 2.96
PROM1-209ENST00000508940 DISP2A7MBM2 1401 aa33.57■■■□□ 2.96
PROM1-209ENST00000508940 APBA3O96018 575 aa33.57■■■□□ 2.96
PROM1-209ENST00000508940 IL2RBP14784 551 aa33.57■■■□□ 2.96
PROM1-209ENST00000508940 RTL1A6NKG5 1358 aa33.57■■■□□ 2.96
PROM1-209ENST00000508940 MARCH10Q8NA82 808 aaPredicted RBP33.54■■■□□ 2.96
PROM1-209ENST00000508940 TNS1Q9HBL0 1735 aaKnown RBP33.51■■■□□ 2.96
PROM1-209ENST00000508940 FAM208AQ9UK61 1670 aaKnown RBP33.5■■■□□ 2.95
PROM1-209ENST00000508940 SMG6Q86US8 1419 aaKnown RBP33.48■■■□□ 2.95
PROM1-209ENST00000508940 EZH2Q15910 746 aaKnown RBP33.48■■■□□ 2.95
PROM1-209ENST00000508940 FLT4P35916 1363 aa33.47■■■□□ 2.95
PROM1-209ENST00000508940 KIF24Q5T7B8 1368 aa33.47■■■□□ 2.95
PROM1-209ENST00000508940 TNS2Q63HR2 1409 aa33.47■■■□□ 2.95
PROM1-209ENST00000508940 PPM1GO15355 546 aaPredicted RBP33.47■■■□□ 2.95
PROM1-209ENST00000508940 PEAK1Q9H792 1746 aa33.46■■■□□ 2.95
PROM1-209ENST00000508940 HSP90AB2PQ58FF8 381 aa33.46■■■□□ 2.95
PROM1-209ENST00000508940 INSRP06213 1382 aa33.46■■■□□ 2.95
PROM1-209ENST00000508940 CAMKK2Q96RR4 588 aa33.45■■■□□ 2.95
PROM1-209ENST00000508940 EMILIN1Q9Y6C2 1016 aa33.45■■■□□ 2.95
PROM1-209ENST00000508940 KIF7Q2M1P5 1343 aa33.45■■■□□ 2.95
PROM1-209ENST00000508940 BCL11BQ9C0K0 894 aaPredicted RBP33.43■■■□□ 2.94
PROM1-209ENST00000508940 KNSTRNQ9Y448 316 aa33.43■■■□□ 2.94
PROM1-209ENST00000508940 PARD3Q8TEW0 1356 aa33.42■■■□□ 2.94
PROM1-209ENST00000508940 BCL9O00512 1426 aa33.42■■■□□ 2.94
PROM1-209ENST00000508940 TNNT2P45379 298 aaPredicted RBP33.41■■■□□ 2.94
PROM1-209ENST00000508940 NBPF6Q5VWK0 638 aa33.41■■■□□ 2.94
PROM1-209ENST00000508940 NBPF4Q96M43 638 aa33.41■■■□□ 2.94
PROM1-209ENST00000508940 SBF2Q86WG5 1849 aa33.39■■■□□ 2.94
PROM1-209ENST00000508940 RGPD2P0DJD1 1756 aa33.39■■■□□ 2.94
PROM1-209ENST00000508940 NSD2O96028 1365 aa33.38■■■□□ 2.93
PROM1-209ENST00000508940 DDX54Q8TDD1 881 aaKnown RBP33.37■■■□□ 2.93
PROM1-209ENST00000508940 MAP2P11137 1827 aaKnown RBP33.37■■■□□ 2.93
PROM1-209ENST00000508940 ANKRD26Q9UPS8 1709 aa33.36■■■□□ 2.93
PROM1-209ENST00000508940 USHBP1Q8N6Y0 703 aa33.36■■■□□ 2.93
PROM1-209ENST00000508940 POLKQ9UBT6 870 aa33.36■■■□□ 2.93
PROM1-209ENST00000508940 WASHC2AQ641Q2 1341 aa33.35■■■□□ 2.93
PROM1-209ENST00000508940 RAPGEF4Q8WZA2 1011 aa33.35■■■□□ 2.93
PROM1-209ENST00000508940 MORC1Q86VD1 984 aa33.34■■■□□ 2.93
PROM1-209ENST00000508940 PLSCR1O15162 318 aa33.33■■■□□ 2.93
PROM1-209ENST00000508940 PTF1AQ7RTS3 328 aa33.33■■■□□ 2.93
PROM1-209ENST00000508940 ZCRB1Q8TBF4 217 aaKnown RBP33.33■■■□□ 2.93
PROM1-209ENST00000508940 PSDA5PKW4 1024 aaPredicted RBP33.32■■■□□ 2.92
PROM1-209ENST00000508940 ACSBG1Q96GR2 724 aa33.32■■■□□ 2.92
PROM1-209ENST00000508940 TATP17735 454 aaPredicted RBP33.31■■■□□ 2.92
PROM1-209ENST00000508940 NBPF14Q5TI25 921 aa33.3■■■□□ 2.92
PROM1-209ENST00000508940 KCNQ2O43526 872 aa33.29■■■□□ 2.92
PROM1-209ENST00000508940 KAT6BQ8WYB5 2073 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms