RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 FOXJ1Q92949 421 aa11.4□□□□□ -0.58
GYPB-210ENST00000508841 SLC10A4Q96EP9 437 aa11.4□□□□□ -0.58
GYPB-210ENST00000508841 C1QTNF2Q9BXJ5 285 aa11.4□□□□□ -0.58
GYPB-210ENST00000508841 ERFEQ4G0M1 354 aa11.39□□□□□ -0.59
GYPB-210ENST00000508841 CCDC125Q86Z20 511 aa11.39□□□□□ -0.59
GYPB-210ENST00000508841 FAM174AQ8TBP5 190 aa11.39□□□□□ -0.59
GYPB-210ENST00000508841 GDF9O60383 454 aa11.38□□□□□ -0.59
GYPB-210ENST00000508841 NBPF20Q3BBV1 942 aa11.38□□□□□ -0.59
GYPB-210ENST00000508841 LCE2AQ5TA79 106 aaPredicted RBP11.38□□□□□ -0.59
GYPB-210ENST00000508841 ST8SIA5O15466 376 aa11.37□□□□□ -0.59
GYPB-210ENST00000508841 SLFNL1Q499Z3 407 aa11.37□□□□□ -0.59
GYPB-210ENST00000508841 PPP1R12CQ9BZL4 782 aa11.37□□□□□ -0.59
GYPB-210ENST00000508841 CEP126Q9P2H0 1117 aa11.37□□□□□ -0.59
GYPB-210ENST00000508841 C4orf48Q5BLP8 95 aa11.36□□□□□ -0.59
GYPB-210ENST00000508841 RNF20Q5VTR2 975 aa11.36□□□□□ -0.59
GYPB-210ENST00000508841 EHBP1Q8NDI1 1231 aa11.36□□□□□ -0.59
GYPB-210ENST00000508841 AAASQ9NRG9 546 aa11.36□□□□□ -0.59
GYPB-210ENST00000508841 PPP1R15AO75807 674 aaPredicted RBP11.35□□□□□ -0.59
GYPB-210ENST00000508841 SKOR1P84550 965 aa11.35□□□□□ -0.59
GYPB-210ENST00000508841 TRIM52Q96A61 297 aa11.35□□□□□ -0.59
GYPB-210ENST00000508841 MAP4K5Q9Y4K4 846 aa11.35□□□□□ -0.59
GYPB-210ENST00000508841 HOMEZQ8IX15 550 aa11.34□□□□□ -0.59
GYPB-210ENST00000508841 SEPT12Q8IYM1 358 aa11.34□□□□□ -0.59
GYPB-210ENST00000508841 UCN2Q96RP3 112 aa11.34□□□□□ -0.59
GYPB-210ENST00000508841 PALM3A6NDB9 673 aaPredicted RBP11.33□□□□□ -0.6
GYPB-210ENST00000508841 ATP9BO43861 1147 aa11.33□□□□□ -0.6
GYPB-210ENST00000508841 LZTS3O60299 673 aaPredicted RBP11.33□□□□□ -0.6
GYPB-210ENST00000508841 RC3H1Q5TC82 1133 aaKnown RBP11.33□□□□□ -0.6
GYPB-210ENST00000508841 MPNDQ8N594 471 aa11.33□□□□□ -0.6
GYPB-210ENST00000508841 MAP7D1Q3KQU3 841 aa11.32□□□□□ -0.6
GYPB-210ENST00000508841 RNF135Q8IUD6 432 aa11.32□□□□□ -0.6
GYPB-210ENST00000508841 WNT7AO00755 349 aa11.31□□□□□ -0.6
GYPB-210ENST00000508841 TFIP11Q9UBB9 837 aaKnown RBP11.31□□□□□ -0.6
GYPB-210ENST00000508841 CFAP70Q5T0N1 1121 aa11.3□□□□□ -0.6
GYPB-210ENST00000508841 SKIP12755 728 aa11.29□□□□□ -0.6
GYPB-210ENST00000508841 PLEKHM2Q8IWE5 1019 aa11.29□□□□□ -0.6
GYPB-210ENST00000508841 PHTF2Q8N3S3 785 aa11.29□□□□□ -0.6
GYPB-210ENST00000508841 PBXIP1Q96AQ6 731 aa11.29□□□□□ -0.6
GYPB-210ENST00000508841 CDK15Q96Q40 435 aa11.29□□□□□ -0.6
GYPB-210ENST00000508841 MAFBQ9Y5Q3 323 aaPredicted RBP11.29□□□□□ -0.6
GYPB-210ENST00000508841 ESPNB1AK53 854 aa11.28□□□□□ -0.6
GYPB-210ENST00000508841 LMOD1P29536 600 aaPredicted RBP11.28□□□□□ -0.6
GYPB-210ENST00000508841 TBC1D9Q6ZT07 1266 aa11.28□□□□□ -0.6
GYPB-210ENST00000508841 VASH1Q7L8A9 365 aaPredicted RBP11.28□□□□□ -0.6
GYPB-210ENST00000508841 CHIC2Q9UKJ5 165 aa11.28□□□□□ -0.6
GYPB-210ENST00000508841 KCTD15Q96SI1 283 aaPredicted RBP11.27□□□□□ -0.61
GYPB-210ENST00000508841 ACIN1Q9UKV3 1341 aaKnown RBP11.27□□□□□ -0.61
GYPB-210ENST00000508841 USP17L5A8MUK1 530 aa11.26□□□□□ -0.61
GYPB-210ENST00000508841 GIGYF1O75420 1035 aaPredicted RBP11.26□□□□□ -0.61
GYPB-210ENST00000508841 WFS1O76024 890 aa11.26□□□□□ -0.61
GYPB-210ENST00000508841 PLPP7Q8NBV4 271 aa11.26□□□□□ -0.61
GYPB-210ENST00000508841 PIK3CDO00329 1044 aa11.25□□□□□ -0.61
GYPB-210ENST00000508841 FOXC1Q12948 553 aa11.25□□□□□ -0.61
GYPB-210ENST00000508841 SIRT1Q96EB6 747 aa11.25□□□□□ -0.61
GYPB-210ENST00000508841 USP17L3A6NCW0 530 aa11.24□□□□□ -0.61
GYPB-210ENST00000508841 USP17L4A6NCW7 530 aa11.24□□□□□ -0.61
GYPB-210ENST00000508841 SIAH2O43255 324 aa11.24□□□□□ -0.61
GYPB-210ENST00000508841 DHX9Q08211 1270 aaKnown RBP11.24□□□□□ -0.61
GYPB-210ENST00000508841 EML3Q32P44 896 aa11.24□□□□□ -0.61
GYPB-210ENST00000508841 USP17L2Q6R6M4 530 aa11.24□□□□□ -0.61
GYPB-210ENST00000508841 USP17L1Q7RTZ2 530 aa11.24□□□□□ -0.61
GYPB-210ENST00000508841 PKD2L1Q9P0L9 805 aa11.24□□□□□ -0.61
GYPB-210ENST00000508841 DOLKQ9UPQ8 538 aa11.24□□□□□ -0.61
GYPB-210ENST00000508841 RFX1P22670 979 aa11.23□□□□□ -0.61
GYPB-210ENST00000508841 NR5A1Q13285 461 aa11.23□□□□□ -0.61
GYPB-210ENST00000508841 ARID5BQ14865 1188 aa11.23□□□□□ -0.61
GYPB-210ENST00000508841 CRIPAKQ8N1N5 446 aa11.23□□□□□ -0.61
GYPB-210ENST00000508841 MRGPRX2Q96LB1 330 aa11.23□□□□□ -0.61
GYPB-210ENST00000508841 DACH1Q9UI36 760 aa11.23□□□□□ -0.61
GYPB-210ENST00000508841 ADH1CP00326 375 aa11.22□□□□□ -0.61
GYPB-210ENST00000508841 PDE4CQ08493 712 aa11.22□□□□□ -0.61
GYPB-210ENST00000508841 VRTNQ9H8Y1 702 aa11.22□□□□□ -0.61
GYPB-210ENST00000508841 STK17AQ9UEE5 414 aa11.22□□□□□ -0.61
GYPB-210ENST00000508841 C11orf95C9JLR9 678 aaPredicted RBP11.21□□□□□ -0.61
GYPB-210ENST00000508841 ATP5J2-PTCD1G3V325 749 aa11.21□□□□□ -0.61
GYPB-210ENST00000508841 INTS6LQ5JSJ4 861 aaKnown RBP11.2□□□□□ -0.62
GYPB-210ENST00000508841 TRIM50Q86XT4 487 aa11.2□□□□□ -0.62
GYPB-210ENST00000508841 GMPR2Q9P2T1 348 aaKnown RBP11.2□□□□□ -0.62
GYPB-210ENST00000508841 TLL2Q9Y6L7 1015 aa11.2□□□□□ -0.62
GYPB-210ENST00000508841 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.19□□□□□ -0.62
GYPB-210ENST00000508841 FSHRP23945 695 aa11.19□□□□□ -0.62
GYPB-210ENST00000508841 SRPK2P78362 688 aaKnown RBP11.19□□□□□ -0.62
GYPB-210ENST00000508841 USP4Q13107 963 aa11.19□□□□□ -0.62
GYPB-210ENST00000508841 NCOA4Q13772 614 aa11.19□□□□□ -0.62
GYPB-210ENST00000508841 CCDC85AQ96PX6 553 aaPredicted RBP11.19□□□□□ -0.62
GYPB-210ENST00000508841 NOD1Q9Y239 953 aa11.19□□□□□ -0.62
GYPB-210ENST00000508841 PCDHB11Q9Y5F2 797 aa11.19□□□□□ -0.62
GYPB-210ENST00000508841 AXIN1O15169 862 aa11.18□□□□□ -0.62
GYPB-210ENST00000508841 ATP1A2P50993 1020 aa11.18□□□□□ -0.62
GYPB-210ENST00000508841 SNIP1Q8TAD8 396 aaKnown RBP11.18□□□□□ -0.62
GYPB-210ENST00000508841 ATG7O95352 703 aa11.17□□□□□ -0.62
GYPB-210ENST00000508841 MYCP01106 439 aaPredicted RBP11.17□□□□□ -0.62
GYPB-210ENST00000508841 AVPP01185 164 aa11.17□□□□□ -0.62
GYPB-210ENST00000508841 GRM5P41594 1212 aa11.17□□□□□ -0.62
GYPB-210ENST00000508841 NFX1Q12986 1120 aaKnown RBP11.17□□□□□ -0.62
GYPB-210ENST00000508841 MKRN1Q9UHC7 482 aaKnown RBP11.17□□□□□ -0.62
GYPB-210ENST00000508841 INSM1Q01101 510 aaPredicted RBP11.16□□□□□ -0.62
GYPB-210ENST00000508841 OXLD1Q5BKU9 147 aa11.16□□□□□ -0.62
GYPB-210ENST00000508841 KANK4Q5T7N3 995 aaPredicted RBP11.16□□□□□ -0.62
GYPB-210ENST00000508841 CCDC116Q8IYX3 515 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 311.6 ms