RNA–Protein interactions for RNA: ENST00000508683.5

CCHCR1-226, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-226ENST00000508683 RBM6P78332 1123 aaKnown RBP27.34■■□□□ 1.97
CCHCR1-226ENST00000508683 RXRBP28702 533 aa27.33■■□□□ 1.97
CCHCR1-226ENST00000508683 EVA1CP58658 441 aa27.32■■□□□ 1.96
CCHCR1-226ENST00000508683 GJD4Q96KN9 370 aaPredicted RBP27.32■■□□□ 1.96
CCHCR1-226ENST00000508683 AXIN2Q9Y2T1 843 aa27.32■■□□□ 1.96
CCHCR1-226ENST00000508683 MAP3K19Q56UN5 1328 aa27.32■■□□□ 1.96
CCHCR1-226ENST00000508683 RTL1A6NKG5 1358 aa27.32■■□□□ 1.96
CCHCR1-226ENST00000508683 KIF24Q5T7B8 1368 aa27.32■■□□□ 1.96
CCHCR1-226ENST00000508683 MAP2P11137 1827 aaKnown RBP27.32■■□□□ 1.96
CCHCR1-226ENST00000508683 BLMP54132 1417 aaPredicted RBP27.32■■□□□ 1.96
CCHCR1-226ENST00000508683 IP6K1Q92551 441 aa27.3■■□□□ 1.96
CCHCR1-226ENST00000508683 CDK12Q9NYV4 1490 aaPredicted RBP27.3■■□□□ 1.96
CCHCR1-226ENST00000508683 FBLN1P23142 703 aa27.29■■□□□ 1.96
CCHCR1-226ENST00000508683 MORC1Q86VD1 984 aa27.29■■□□□ 1.96
CCHCR1-226ENST00000508683 STRN4Q9NRL3 753 aa27.29■■□□□ 1.96
CCHCR1-226ENST00000508683 GLI3P10071 1580 aa27.29■■□□□ 1.96
CCHCR1-226ENST00000508683 SPATA31A5Q5VU36 1347 aa27.27■■□□□ 1.96
CCHCR1-226ENST00000508683 SPATA31A7Q8IWB4 1347 aa27.27■■□□□ 1.96
CCHCR1-226ENST00000508683 AMPHP49418 695 aa27.27■■□□□ 1.96
CCHCR1-226ENST00000508683 RRS1Q15050 365 aaKnown RBP27.27■■□□□ 1.96
CCHCR1-226ENST00000508683 WDR17Q8IZU2 1322 aa27.26■■□□□ 1.95
CCHCR1-226ENST00000508683 ZNF316A6NFI3 1004 aaPredicted RBP27.26■■□□□ 1.95
CCHCR1-226ENST00000508683 CCDC9Q9Y3X0 531 aaKnown RBP27.26■■□□□ 1.95
CCHCR1-226ENST00000508683 HOXC9P31274 260 aa27.25■■□□□ 1.95
CCHCR1-226ENST00000508683 CRB1P82279 1406 aa27.24■■□□□ 1.95
CCHCR1-226ENST00000508683 PEAK1Q9H792 1746 aa27.24■■□□□ 1.95
CCHCR1-226ENST00000508683 FLT4P35916 1363 aa27.24■■□□□ 1.95
CCHCR1-226ENST00000508683 FAM208AQ9UK61 1670 aaKnown RBP27.24■■□□□ 1.95
CCHCR1-226ENST00000508683 SPATA31A1Q5TZJ5 1347 aa27.24■■□□□ 1.95
CCHCR1-226ENST00000508683 LARP1Q6PKG0 1096 aaKnown RBP27.24■■□□□ 1.95
CCHCR1-226ENST00000508683 ERBB3P21860 1342 aa27.23■■□□□ 1.95
CCHCR1-226ENST00000508683 CC2D1BQ5T0F9 858 aaKnown RBP27.23■■□□□ 1.95
CCHCR1-226ENST00000508683 DDX10Q13206 875 aaKnown RBP27.22■■□□□ 1.95
CCHCR1-226ENST00000508683 POLKQ9UBT6 870 aa27.22■■□□□ 1.95
CCHCR1-226ENST00000508683 TNNT2P45379 298 aaPredicted RBP27.21■■□□□ 1.95
CCHCR1-226ENST00000508683 EMILIN1Q9Y6C2 1016 aa27.21■■□□□ 1.95
CCHCR1-226ENST00000508683 SMG6Q86US8 1419 aaKnown RBP27.21■■□□□ 1.95
CCHCR1-226ENST00000508683 INSRP06213 1382 aa27.21■■□□□ 1.95
CCHCR1-226ENST00000508683 ONECUT3O60422 494 aaPredicted RBP27.2■■□□□ 1.94
CCHCR1-226ENST00000508683 ANKRD24Q8TF21 1146 aa27.2■■□□□ 1.94
CCHCR1-226ENST00000508683 CSB-PGBD3P0DP91 1061 aa27.19■■□□□ 1.94
CCHCR1-226ENST00000508683 TOM1L2Q6ZVM7 507 aa27.19■■□□□ 1.94
CCHCR1-226ENST00000508683 ILDR2Q71H61 639 aa27.19■■□□□ 1.94
CCHCR1-226ENST00000508683 THRAP3Q9Y2W1 955 aaKnown RBP27.19■■□□□ 1.94
CCHCR1-226ENST00000508683 RGS12O14924 1447 aa27.17■■□□□ 1.94
CCHCR1-226ENST00000508683 CARD10Q9BWT7 1032 aa27.17■■□□□ 1.94
CCHCR1-226ENST00000508683 HSP90AB2PQ58FF8 381 aa27.16■■□□□ 1.94
CCHCR1-226ENST00000508683 BARGINQ6ZT62 677 aa27.16■■□□□ 1.94
CCHCR1-226ENST00000508683 TCP11L2Q8N4U5 519 aa27.16■■□□□ 1.94
CCHCR1-226ENST00000508683 PPM1GO15355 546 aaPredicted RBP27.15■■□□□ 1.94
CCHCR1-226ENST00000508683 THSD7AQ9UPZ6 1657 aa27.14■■□□□ 1.94
CCHCR1-226ENST00000508683 USP35Q9P2H5 1018 aa27.14■■□□□ 1.94
CCHCR1-226ENST00000508683 WNK3Q9BYP7 1800 aa27.13■■□□□ 1.93
CCHCR1-226ENST00000508683 FAM98CQ17RN3 349 aaKnown RBP27.13■■□□□ 1.93
CCHCR1-226ENST00000508683 NLRP2Q9NX02 1062 aa27.12■■□□□ 1.93
CCHCR1-226ENST00000508683 LTV1Q96GA3 475 aaPredicted RBP27.11■■□□□ 1.93
CCHCR1-226ENST00000508683 RGPD2P0DJD1 1756 aa27.11■■□□□ 1.93
CCHCR1-226ENST00000508683 SEPT12Q8IYM1 358 aa27.1■■□□□ 1.93
CCHCR1-226ENST00000508683 BRWD3Q6RI45 1802 aa27.1■■□□□ 1.93
CCHCR1-226ENST00000508683 PARP4Q9UKK3 1724 aaKnown RBP27.1■■□□□ 1.93
CCHCR1-226ENST00000508683 CNGB1Q14028 1251 aaPredicted RBP27.09■■□□□ 1.93
CCHCR1-226ENST00000508683 CDCA7Q9BWT1 371 aaPredicted RBP27.09■■□□□ 1.93
CCHCR1-226ENST00000508683 PARD3Q8TEW0 1356 aa27.08■■□□□ 1.93
CCHCR1-226ENST00000508683 MTHFSP49914 203 aa27.06■■□□□ 1.92
CCHCR1-226ENST00000508683 A0A0G2JS52 829 aa27.05■■□□□ 1.92
CCHCR1-226ENST00000508683 MYT1Q01538 1121 aa27.05■■□□□ 1.92
CCHCR1-226ENST00000508683 DISP2A7MBM2 1401 aa27.05■■□□□ 1.92
CCHCR1-226ENST00000508683 EIF4A2Q14240 407 aaKnown RBP27.03■■□□□ 1.92
CCHCR1-226ENST00000508683 NBPF6Q5VWK0 638 aa27.03■■□□□ 1.92
CCHCR1-226ENST00000508683 NBPF4Q96M43 638 aa27.03■■□□□ 1.92
CCHCR1-226ENST00000508683 PPP2R1AP30153 589 aa27.02■■□□□ 1.92
CCHCR1-226ENST00000508683 RALBP1Q15311 655 aa27.02■■□□□ 1.92
CCHCR1-226ENST00000508683 NCAPD2Q15021 1401 aa27.01■■□□□ 1.91
CCHCR1-226ENST00000508683 LRRC37A3O60309 1634 aa27.01■■□□□ 1.91
CCHCR1-226ENST00000508683 IL2RBP14784 551 aa27■■□□□ 1.91
CCHCR1-226ENST00000508683 KRT27Q7Z3Y8 459 aa26.99■■□□□ 1.91
CCHCR1-226ENST00000508683 RGPD1P0DJD0 1748 aa26.97■■□□□ 1.91
CCHCR1-226ENST00000508683 DDB1Q16531 1140 aa26.97■■□□□ 1.91
CCHCR1-226ENST00000508683 EYA1Q99502 592 aa26.97■■□□□ 1.91
CCHCR1-226ENST00000508683 COL3A1P02461 1466 aaPredicted RBP26.96■■□□□ 1.91
CCHCR1-226ENST00000508683 IGSF1Q8N6C5 1336 aa26.95■■□□□ 1.91
CCHCR1-226ENST00000508683 IL13P35225 146 aa26.95■■□□□ 1.9
CCHCR1-226ENST00000508683 PDE3BQ13370 1112 aa26.95■■□□□ 1.9
CCHCR1-226ENST00000508683 CFAP53Q96M91 514 aa26.95■■□□□ 1.9
CCHCR1-226ENST00000508683 TNS2Q63HR2 1409 aa26.94■■□□□ 1.9
CCHCR1-226ENST00000508683 USHBP1Q8N6Y0 703 aa26.94■■□□□ 1.9
CCHCR1-226ENST00000508683 EXOC5O00471 708 aa26.93■■□□□ 1.9
CCHCR1-226ENST00000508683 DIAPH1O60610 1272 aaKnown RBP26.93■■□□□ 1.9
CCHCR1-226ENST00000508683 RAPGEF4Q8WZA2 1011 aa26.93■■□□□ 1.9
CCHCR1-226ENST00000508683 MEGF6O75095 1541 aa26.92■■□□□ 1.9
CCHCR1-226ENST00000508683 PLEKHG2Q9H7P9 1386 aa26.92■■□□□ 1.9
CCHCR1-226ENST00000508683 OVOS2A0A0G2JMS6 1433 aa26.91■■□□□ 1.9
CCHCR1-226ENST00000508683 PRKRIP1Q9H875 184 aaPredicted RBP26.91■■□□□ 1.9
CCHCR1-226ENST00000508683 EP400Q96L91 3159 aa26.9■■□□□ 1.9
CCHCR1-226ENST00000508683 MYBBP1AQ9BQG0 1328 aaKnown RBP26.9■■□□□ 1.9
CCHCR1-226ENST00000508683 SOCS7O14512 581 aa26.89■■□□□ 1.9
CCHCR1-226ENST00000508683 TATP17735 454 aaPredicted RBP26.89■■□□□ 1.9
CCHCR1-226ENST00000508683 KDRP35968 1356 aa26.88■■□□□ 1.89
CCHCR1-226ENST00000508683 PKD1L3Q7Z443 1732 aa26.87■■□□□ 1.89
CCHCR1-226ENST00000508683 SHANK3Q9BYB0 1731 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms