RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 NANOS1Q8WY41 292 aaKnown RBP8.63□□□□□ -1.03
GYPB-209ENST00000508618 SPINT1O43278 529 aa8.62□□□□□ -1.03
GYPB-209ENST00000508618 DHX9Q08211 1270 aaKnown RBP8.62□□□□□ -1.03
GYPB-209ENST00000508618 PPP1R26Q5T8A7 1209 aaPredicted RBP8.62□□□□□ -1.03
GYPB-209ENST00000508618 SLC10A4Q96EP9 437 aa8.61□□□□□ -1.03
GYPB-209ENST00000508618 CARD14Q9BXL6 1004 aa8.61□□□□□ -1.03
GYPB-209ENST00000508618 FKBPLQ9UIM3 349 aa8.61□□□□□ -1.03
GYPB-209ENST00000508618 GSK3AP49840 483 aa8.6□□□□□ -1.03
GYPB-209ENST00000508618 KRT76Q01546 638 aa8.6□□□□□ -1.03
GYPB-209ENST00000508618 PTSQ03393 145 aa8.6□□□□□ -1.03
GYPB-209ENST00000508618 GPSM3Q9Y4H4 160 aa8.6□□□□□ -1.03
GYPB-209ENST00000508618 LOC100996750A0A140TA64 210 aa8.59□□□□□ -1.03
GYPB-209ENST00000508618 RNF225M0QZC1 329 aaPredicted RBP8.59□□□□□ -1.03
GYPB-209ENST00000508618 ARHGAP9Q9BRR9 750 aa8.59□□□□□ -1.03
GYPB-209ENST00000508618 KRTAP4-6Q9BYQ5 205 aa8.59□□□□□ -1.03
GYPB-209ENST00000508618 KCTD15Q96SI1 283 aaPredicted RBP8.58□□□□□ -1.04
GYPB-209ENST00000508618 CTDSPL2Q05D32 466 aa8.57□□□□□ -1.04
GYPB-209ENST00000508618 SLC24A3Q9HC58 644 aa8.57□□□□□ -1.04
GYPB-209ENST00000508618 SLC35F4A4IF30 521 aa8.56□□□□□ -1.04
GYPB-209ENST00000508618 CBLBQ13191 982 aa8.56□□□□□ -1.04
GYPB-209ENST00000508618 CCDC155Q8N6L0 562 aa8.56□□□□□ -1.04
GYPB-209ENST00000508618 NBPF20Q3BBV1 942 aa8.55□□□□□ -1.04
GYPB-209ENST00000508618 SH3D19Q5HYK7 790 aa8.55□□□□□ -1.04
GYPB-209ENST00000508618 INTS6LQ5JSJ4 861 aaKnown RBP8.55□□□□□ -1.04
GYPB-209ENST00000508618 PPP2R2DQ66LE6 453 aa8.55□□□□□ -1.04
GYPB-209ENST00000508618 GPR161Q8N6U8 529 aaKnown RBP8.55□□□□□ -1.04
GYPB-209ENST00000508618 POLR3EQ9NVU0 708 aa8.55□□□□□ -1.04
GYPB-209ENST00000508618 PTK2Q05397 1052 aa8.54□□□□□ -1.04
GYPB-209ENST00000508618 ZBTB33Q86T24 672 aa8.54□□□□□ -1.04
GYPB-209ENST00000508618 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.54□□□□□ -1.04
GYPB-209ENST00000508618 SLURP2P0DP57 97 aa8.53□□□□□ -1.04
GYPB-209ENST00000508618 ITGA6P23229 1130 aa8.53□□□□□ -1.04
GYPB-209ENST00000508618 SKIV2LQ15477 1246 aaKnown RBP8.53□□□□□ -1.04
GYPB-209ENST00000508618 LRRN4Q8WUT4 740 aa8.53□□□□□ -1.04
GYPB-209ENST00000508618 CNTNAP3BQ96NU0 1288 aa8.53□□□□□ -1.04
GYPB-209ENST00000508618 OCSTAMPQ9BR26 566 aa8.53□□□□□ -1.04
GYPB-209ENST00000508618 COL25A1Q9BXS0 654 aaPredicted RBP8.53□□□□□ -1.04
GYPB-209ENST00000508618 CNTNAP3Q9BZ76 1288 aa8.53□□□□□ -1.04
GYPB-209ENST00000508618 ZNF385CQ66K41 422 aaPredicted RBP8.51□□□□□ -1.05
GYPB-209ENST00000508618 PNMA1Q8ND90 353 aa8.51□□□□□ -1.05
GYPB-209ENST00000508618 RNF217Q8TC41 542 aa8.51□□□□□ -1.05
GYPB-209ENST00000508618 ADAMTS8Q9UP79 889 aa8.51□□□□□ -1.05
GYPB-209ENST00000508618 FIGNL2A6NMB9 653 aa8.5□□□□□ -1.05
GYPB-209ENST00000508618 CTSOP43234 321 aaPredicted RBP8.5□□□□□ -1.05
GYPB-209ENST00000508618 NR6A1Q15406 480 aa8.5□□□□□ -1.05
GYPB-209ENST00000508618 RNFT1Q5M7Z0 435 aa8.5□□□□□ -1.05
GYPB-209ENST00000508618 ADAM32Q8TC27 787 aa8.5□□□□□ -1.05
GYPB-209ENST00000508618 ADH1AP07327 375 aa8.49□□□□□ -1.05
GYPB-209ENST00000508618 RASSF7Q02833 373 aa8.49□□□□□ -1.05
GYPB-209ENST00000508618 TMEM151AQ8N4L1 468 aa8.49□□□□□ -1.05
GYPB-209ENST00000508618 SVOPQ8N4V2 548 aa8.49□□□□□ -1.05
GYPB-209ENST00000508618 TRIM52Q96A61 297 aa8.49□□□□□ -1.05
GYPB-209ENST00000508618 DDRGK1Q96HY6 314 aa8.49□□□□□ -1.05
GYPB-209ENST00000508618 SENP3-EIF4A1A0A087X0R7 540 aa8.48□□□□□ -1.05
GYPB-209ENST00000508618 GDF11O95390 407 aa8.48□□□□□ -1.05
GYPB-209ENST00000508618 FBXO31Q5XUX0 539 aaPredicted RBP8.48□□□□□ -1.05
GYPB-209ENST00000508618 SV2AQ7L0J3 742 aa8.48□□□□□ -1.05
GYPB-209ENST00000508618 KCTD17Q8N5Z5 321 aa8.48□□□□□ -1.05
GYPB-209ENST00000508618 AGBL1Q96MI9 1066 aa8.48□□□□□ -1.05
GYPB-209ENST00000508618 INSM2Q96T92 566 aaPredicted RBP8.48□□□□□ -1.05
GYPB-209ENST00000508618 ESPNB1AK53 854 aa8.47□□□□□ -1.05
GYPB-209ENST00000508618 ARHGEF15O94989 841 aa8.47□□□□□ -1.05
GYPB-209ENST00000508618 RELBQ01201 579 aa8.47□□□□□ -1.05
GYPB-209ENST00000508618 SEPT12Q8IYM1 358 aa8.47□□□□□ -1.05
GYPB-209ENST00000508618 ZNF784Q8NCA9 323 aaPredicted RBP8.47□□□□□ -1.05
GYPB-209ENST00000508618 POLMQ9NP87 494 aaPredicted RBP8.47□□□□□ -1.05
GYPB-209ENST00000508618 SUZ12Q15022 739 aaKnown RBP8.46□□□□□ -1.06
GYPB-209ENST00000508618 LILRA1O75019 489 aa8.45□□□□□ -1.06
GYPB-209ENST00000508618 FOXD4L5Q5VV16 416 aaPredicted RBP8.45□□□□□ -1.06
GYPB-209ENST00000508618 DNMT3AQ9Y6K1 912 aaPredicted RBP8.45□□□□□ -1.06
GYPB-209ENST00000508618 CDC14CA4D256 554 aa8.44□□□□□ -1.06
GYPB-209ENST00000508618 VWA5B2Q8N398 1253 aa8.44□□□□□ -1.06
GYPB-209ENST00000508618 KDM4CQ9H3R0 1056 aa8.44□□□□□ -1.06
GYPB-209ENST00000508618 AP1G2O75843 785 aa8.43□□□□□ -1.06
GYPB-209ENST00000508618 USP17L8P0C7I0 530 aa8.43□□□□□ -1.06
GYPB-209ENST00000508618 PTGIRP43119 386 aa8.43□□□□□ -1.06
GYPB-209ENST00000508618 SRSF11Q05519 484 aaKnown RBP8.43□□□□□ -1.06
GYPB-209ENST00000508618 KANK3Q6NY19 840 aa8.43□□□□□ -1.06
GYPB-209ENST00000508618 KDF1Q8NAX2 398 aaPredicted RBP8.43□□□□□ -1.06
GYPB-209ENST00000508618 PROCA1Q8NCQ7 364 aaPredicted RBP8.43□□□□□ -1.06
GYPB-209ENST00000508618 ERVH48-1M5A8F1 160 aa8.42□□□□□ -1.06
GYPB-209ENST00000508618 IGHA1P01876 353 aa8.42□□□□□ -1.06
GYPB-209ENST00000508618 DZIP3Q86Y13 1208 aaKnown RBP8.42□□□□□ -1.06
GYPB-209ENST00000508618 WHAMMQ8TF30 809 aa8.42□□□□□ -1.06
GYPB-209ENST00000508618 GMCL1Q96IK5 515 aa8.42□□□□□ -1.06
GYPB-209ENST00000508618 ZNF395Q9H8N7 513 aaPredicted RBP8.42□□□□□ -1.06
GYPB-209ENST00000508618 HMX1Q9NP08 348 aaPredicted RBP8.42□□□□□ -1.06
GYPB-209ENST00000508618 TMPRSS4Q9NRS4 437 aa8.42□□□□□ -1.06
GYPB-209ENST00000508618 FOXK2Q01167 660 aa8.41□□□□□ -1.06
GYPB-209ENST00000508618 LYSMD3Q7Z3D4 306 aa8.41□□□□□ -1.06
GYPB-209ENST00000508618 CCDC125Q86Z20 511 aa8.41□□□□□ -1.06
GYPB-209ENST00000508618 ADAMTS2O95450 1211 aa8.4□□□□□ -1.06
GYPB-209ENST00000508618 GPC1P35052 558 aa8.4□□□□□ -1.06
GYPB-209ENST00000508618 ADD1P35611 737 aaKnown RBP8.4□□□□□ -1.06
GYPB-209ENST00000508618 RNF144AP50876 292 aaPredicted RBP8.4□□□□□ -1.06
GYPB-209ENST00000508618 EPS8L1Q8TE68 723 aa8.4□□□□□ -1.06
GYPB-209ENST00000508618 SCARF2Q96GP6 870 aaPredicted RBP8.4□□□□□ -1.06
GYPB-209ENST00000508618 FAM117AQ9C073 453 aa8.4□□□□□ -1.06
GYPB-209ENST00000508618 GAS6Q14393 721 aa8.39□□□□□ -1.07
GYPB-209ENST00000508618 GPBP1L1Q9HC44 474 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms