RNA–Protein interactions for RNA: ENST00000508479.5

SEC31A-226, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC31A, Length 3,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-226ENST00000508479 HOXC9P31274 260 aa7.66□□□□□ -1.18
SEC31A-226ENST00000508479 COL22A1Q8NFW1 1626 aaPredicted RBP7.66□□□□□ -1.18
SEC31A-226ENST00000508479 BRD4O60885 1362 aaPredicted RBP7.65□□□□□ -1.18
SEC31A-226ENST00000508479 CSB-PGBD3P0DP91 1061 aa7.65□□□□□ -1.18
SEC31A-226ENST00000508479 AFF2P51816 1311 aa7.65□□□□□ -1.18
SEC31A-226ENST00000508479 SPATA31A6Q5VVP1 1343 aa7.65□□□□□ -1.18
SEC31A-226ENST00000508479 NSD2O96028 1365 aa7.65□□□□□ -1.18
SEC31A-226ENST00000508479 EVA1CP58658 441 aa7.65□□□□□ -1.18
SEC31A-226ENST00000508479 LARP1Q6PKG0 1096 aaKnown RBP7.65□□□□□ -1.18
SEC31A-226ENST00000508479 CAMTA1Q9Y6Y1 1673 aa7.65□□□□□ -1.18
SEC31A-226ENST00000508479 RGPD2P0DJD1 1756 aa7.64□□□□□ -1.19
SEC31A-226ENST00000508479 U2SURPO15042 1029 aaKnown RBP7.64□□□□□ -1.19
SEC31A-226ENST00000508479 ANKRD24Q8TF21 1146 aa7.64□□□□□ -1.19
SEC31A-226ENST00000508479 NLRP2Q9NX02 1062 aa7.64□□□□□ -1.19
SEC31A-226ENST00000508479 USP21Q9UK80 565 aa7.64□□□□□ -1.19
SEC31A-226ENST00000508479 HMOX1P09601 288 aa7.63□□□□□ -1.19
SEC31A-226ENST00000508479 IP6K1Q92551 441 aa7.63□□□□□ -1.19
SEC31A-226ENST00000508479 MYBBP1AQ9BQG0 1328 aaKnown RBP7.63□□□□□ -1.19
SEC31A-226ENST00000508479 NPC1L1Q9UHC9 1359 aa7.63□□□□□ -1.19
SEC31A-226ENST00000508479 EIF4A2Q14240 407 aaKnown RBP7.63□□□□□ -1.19
SEC31A-226ENST00000508479 RALBP1Q15311 655 aa7.63□□□□□ -1.19
SEC31A-226ENST00000508479 TOM1L2Q6ZVM7 507 aa7.63□□□□□ -1.19
SEC31A-226ENST00000508479 PHF23Q9BUL5 403 aaPredicted RBP7.63□□□□□ -1.19
SEC31A-226ENST00000508479 AEBP1Q8IUX7 1158 aa7.63□□□□□ -1.19
SEC31A-226ENST00000508479 MRS2Q9HD23 443 aa7.63□□□□□ -1.19
SEC31A-226ENST00000508479 PLCH1Q4KWH8 1693 aa7.63□□□□□ -1.19
SEC31A-226ENST00000508479 USP54Q70EL1 1684 aa7.63□□□□□ -1.19
SEC31A-226ENST00000508479 A0A0G2JS52 829 aa7.62□□□□□ -1.19
SEC31A-226ENST00000508479 MYT1Q01538 1121 aa7.62□□□□□ -1.19
SEC31A-226ENST00000508479 COL18A1P39060 1754 aa7.62□□□□□ -1.19
SEC31A-226ENST00000508479 NBPF6Q5VWK0 638 aa7.62□□□□□ -1.19
SEC31A-226ENST00000508479 NBPF4Q96M43 638 aa7.62□□□□□ -1.19
SEC31A-226ENST00000508479 RGS17Q9UGC6 210 aaPredicted RBP7.62□□□□□ -1.19
SEC31A-226ENST00000508479 CPDO75976 1380 aa7.62□□□□□ -1.19
SEC31A-226ENST00000508479 FLT4P35916 1363 aa7.62□□□□□ -1.19
SEC31A-226ENST00000508479 FAM9BQ8IZU0 186 aa7.62□□□□□ -1.19
SEC31A-226ENST00000508479 ERBB3P21860 1342 aa7.62□□□□□ -1.19
SEC31A-226ENST00000508479 AATKQ6ZMQ8 1374 aa7.62□□□□□ -1.19
SEC31A-226ENST00000508479 EYA1Q99502 592 aa7.61□□□□□ -1.19
SEC31A-226ENST00000508479 COL5A2P05997 1499 aaPredicted RBP7.61□□□□□ -1.19
SEC31A-226ENST00000508479 BCL9LQ86UU0 1499 aa7.61□□□□□ -1.19
SEC31A-226ENST00000508479 QTRT2Q9H974 415 aaKnown RBP7.61□□□□□ -1.19
SEC31A-226ENST00000508479 LMO7Q8WWI1 1683 aa7.61□□□□□ -1.19
SEC31A-226ENST00000508479 DIAPH1O60610 1272 aaKnown RBP7.6□□□□□ -1.19
SEC31A-226ENST00000508479 U2AF1L5P0DN76 240 aaPredicted RBP7.6□□□□□ -1.19
SEC31A-226ENST00000508479 U2AF1Q01081 240 aaKnown RBP eCLIP7.6□□□□□ -1.192e-6■□□□□ 9.2
SEC31A-226ENST00000508479 FAM98CQ17RN3 349 aaKnown RBP7.6□□□□□ -1.19
SEC31A-226ENST00000508479 POTEAQ6S8J7 498 aa7.6□□□□□ -1.19
SEC31A-226ENST00000508479 UNC5CLQ8IV45 518 aa7.6□□□□□ -1.19
SEC31A-226ENST00000508479 CCDC146Q8IYE0 955 aa7.6□□□□□ -1.19
SEC31A-226ENST00000508479 COL14A1Q05707 1796 aaKnown RBP7.6□□□□□ -1.19
SEC31A-226ENST00000508479 FAM182BQ5T319 152 aa7.6□□□□□ -1.19
SEC31A-226ENST00000508479 SULT6B1Q6IMI4 303 aa7.6□□□□□ -1.19
SEC31A-226ENST00000508479 FNBP4Q8N3X1 1017 aaPredicted RBP7.6□□□□□ -1.19
SEC31A-226ENST00000508479 IL13P35225 146 aa7.6□□□□□ -1.19
SEC31A-226ENST00000508479 CFAP53Q96M91 514 aa7.6□□□□□ -1.19
SEC31A-226ENST00000508479 SLIT2O94813 1529 aa7.6□□□□□ -1.19
SEC31A-226ENST00000508479 INSRP06213 1382 aa7.59□□□□□ -1.19
SEC31A-226ENST00000508479 SALL2Q9Y467 1007 aaPredicted RBP7.59□□□□□ -1.19
SEC31A-226ENST00000508479 KAT6BQ8WYB5 2073 aa7.59□□□□□ -1.19
SEC31A-226ENST00000508479 WDR17Q8IZU2 1322 aa7.59□□□□□ -1.19
SEC31A-226ENST00000508479 CDK12Q9NYV4 1490 aaPredicted RBP7.59□□□□□ -1.19
SEC31A-226ENST00000508479 COL3A1P02461 1466 aaPredicted RBP7.59□□□□□ -1.2
SEC31A-226ENST00000508479 NRAPQ86VF7 1730 aa7.58□□□□□ -1.2
SEC31A-226ENST00000508479 ADAMTS8Q9UP79 889 aa7.58□□□□□ -1.2
SEC31A-226ENST00000508479 SMG6Q86US8 1419 aaKnown RBP7.58□□□□□ -1.2
SEC31A-226ENST00000508479 BLMP54132 1417 aaPredicted RBP7.57□□□□□ -1.2
SEC31A-226ENST00000508479 RTL1A6NKG5 1358 aa7.57□□□□□ -1.2
SEC31A-226ENST00000508479 WDR43Q15061 677 aaKnown RBP eCLIP7.57□□□□□ -1.26e-7■□□□□ 9.8
SEC31A-226ENST00000508479 NEUROD2Q15784 382 aa7.57□□□□□ -1.2
SEC31A-226ENST00000508479 GJD4Q96KN9 370 aaPredicted RBP7.57□□□□□ -1.2
SEC31A-226ENST00000508479 RRP7AQ9Y3A4 280 aaKnown RBP7.57□□□□□ -1.2
SEC31A-226ENST00000508479 SPATA31A1Q5TZJ5 1347 aa7.57□□□□□ -1.2
SEC31A-226ENST00000508479 PRKAR2BP31323 418 aa7.57□□□□□ -1.2
SEC31A-226ENST00000508479 TRPC5Q9UL62 973 aaPredicted RBP7.57□□□□□ -1.2
SEC31A-226ENST00000508479 SPATA31A5Q5VU36 1347 aa7.56□□□□□ -1.2
SEC31A-226ENST00000508479 SPATA31A7Q8IWB4 1347 aa7.56□□□□□ -1.2
SEC31A-226ENST00000508479 CRB1P82279 1406 aa7.56□□□□□ -1.2
SEC31A-226ENST00000508479 VPS72Q15906 364 aa7.56□□□□□ -1.2
SEC31A-226ENST00000508479 DDX54Q8TDD1 881 aaKnown RBP7.56□□□□□ -1.2
SEC31A-226ENST00000508479 PHACTR3Q96KR7 559 aa7.56□□□□□ -1.2
SEC31A-226ENST00000508479 TCP11L2Q8N4U5 519 aa7.56□□□□□ -1.2
SEC31A-226ENST00000508479 PNISRQ8TF01 805 aaKnown RBP7.56□□□□□ -1.2
SEC31A-226ENST00000508479 CARD10Q9BWT7 1032 aa7.56□□□□□ -1.2
SEC31A-226ENST00000508479 NWD2Q9ULI1 1742 aa7.56□□□□□ -1.2
SEC31A-226ENST00000508479 MEGF6O75095 1541 aa7.56□□□□□ -1.2
SEC31A-226ENST00000508479 YTHDC1Q96MU7 727 aaKnown RBP7.56□□□□□ -1.2
SEC31A-226ENST00000508479 NUDCQ9Y266 331 aa7.56□□□□□ -1.2
SEC31A-226ENST00000508479 IGSF1Q8N6C5 1336 aa7.55□□□□□ -1.2
SEC31A-226ENST00000508479 GLI3P10071 1580 aa7.55□□□□□ -1.2
SEC31A-226ENST00000508479 ZNF772Q68DY9 489 aaPredicted RBP7.55□□□□□ -1.2
SEC31A-226ENST00000508479 RAPGEF4Q8WZA2 1011 aa7.55□□□□□ -1.2
SEC31A-226ENST00000508479 SEPT12Q8IYM1 358 aa7.54□□□□□ -1.2
SEC31A-226ENST00000508479 RSPH6AQ9H0K4 717 aa7.54□□□□□ -1.2
SEC31A-226ENST00000508479 KIF24Q5T7B8 1368 aa7.54□□□□□ -1.2
SEC31A-226ENST00000508479 ATRNO75882 1429 aa7.54□□□□□ -1.2
SEC31A-226ENST00000508479 IL2RBP14784 551 aa7.54□□□□□ -1.2
SEC31A-226ENST00000508479 RXRBP28702 533 aa7.54□□□□□ -1.2
SEC31A-226ENST00000508479 FAM208AQ9UK61 1670 aaKnown RBP7.54□□□□□ -1.2
SEC31A-226ENST00000508479 RGPD1P0DJD0 1748 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms