RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 NKTRP30414 1462 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 ADCY5O95622 1261 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 UBTFL1P0CB47 393 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 ZSCAN23Q3MJ62 389 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 RALYLQ86SE5 291 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 PLCD4Q9BRC7 762 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 GOLGA6L9A6NEM1 432 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 JAKMIP3Q5VZ66 844 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 CCDC148Q8NFR7 591 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 CLIP2Q9UDT6 1046 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 NCOA2Q15596 1464 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 CTAGE5O15320 804 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 DDX58O95786 925 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 XBP1P17861 261 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 CCDC181Q5TID7 509 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 CLASRPQ8N2M8 674 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 SCAND2PQ9GZW5 306 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 BRMS1Q9HCU9 246 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 ANO10Q9NW15 660 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 SKIDA1Q1XH10 827 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 GGT6Q6P531 493 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 NFXL1Q6ZNB6 911 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 DYDC1Q8WWB3 177 aa8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 MAGEC2Q9UBF1 373 aaPredicted RBP8.63□□□□□ -1.03
UBE2D3-224ENST00000508474 ERICH2A1L162 156 aa8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 KIF3BO15066 747 aa8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 VGFO15240 615 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 POLR3GO15318 223 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 CASQ1P31415 396 aa8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 CENPHQ9H3R5 247 aa8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 ERC1Q8IUD2 1116 aa8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 C16orf45Q96MC5 204 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 PANK2Q9BZ23 570 aa8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 NBPF8Q3BBV2 869 aa8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 CEP135Q66GS9 1140 aa8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 DNAAF4Q8WXU2 420 aa8.62□□□□□ -1.03
UBE2D3-224ENST00000508474 GNAI2P04899 355 aa8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 ME1P48163 572 aa8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 RPAP2Q8IXW5 612 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 RRAGDQ9NQL2 400 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 URI1O94763 535 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 SNX21Q969T3 373 aa8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 TRERF1Q96PN7 1200 aa8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 DDX19AQ9NUU7 478 aaKnown RBP8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 FOSBP53539 338 aa8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 ARHGAP29Q52LW3 1261 aa8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 KIAA1107Q9UPP5 1409 aa8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 ARAP1Q96P48 1450 aa8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 GABPB1Q06547 395 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 FAM177A1Q8N128 213 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 FSD1Q9BTV5 496 aa8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 ANKRD50Q9ULJ7 1429 aa8.61□□□□□ -1.03
UBE2D3-224ENST00000508474 CCT4P50991 539 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 ZNF397Q8NF99 534 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 PDRG1Q9NUG6 133 aa8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 NCOA1Q15788 1441 aa8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 EPB41L2O43491 1005 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 KIF5CO60282 957 aa8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 MTHFSP49914 203 aa8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 SMARCA4P51532 1647 aa8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 LMAN1P49257 510 aa8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 TWISTNBQ3B726 338 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 SH2B1Q9NRF2 756 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 MNAT1P51948 309 aa8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 CCDC83Q8IWF9 413 aa8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 SMARCC1Q92922 1105 aaPredicted RBP8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 RBM33Q96EV2 1170 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 SRRTQ9BXP5 876 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-224ENST00000508474 SNW1Q13573 536 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 ODF2Q5BJF6 829 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 WWC1Q8IX03 1113 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 TSPYL4Q9UJ04 414 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 NOL7Q9UMY1 257 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 FAM193AP78312 1265 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 TEFQ10587 303 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 CCDC150Q8NCX0 1101 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 TIAM1Q13009 1591 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 SURF6O75683 361 aaKnown RBP8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 KRT32Q14532 448 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 BMP2KLQ5H9B9 411 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 C20orf194Q5TEA3 1177 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 AEBP2Q6ZN18 517 aaPredicted RBP8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 RASSF4Q9H2L5 321 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 ERBINQ96RT1 1412 aa8.59□□□□□ -1.03
UBE2D3-224ENST00000508474 C1orf115Q9H7X2 142 aa8.59□□□□□ -1.04
UBE2D3-224ENST00000508474 TXLNAP40222 546 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 UBE2HP62256 183 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 C8orf34Q49A92 452 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 LUZP1Q86V48 1076 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 V9GYY5 206 aaPredicted RBP8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 GOLGA6L10A0A0M3HER8 536 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 NF2P35240 595 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 TUBB4BP68371 445 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 CFAP100Q494V2 611 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 BLOC1S2Q6QNY1 142 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 CCDC91Q7Z6B0 441 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 EPS15P42566 896 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 CEBPZQ03701 1054 aaKnown RBP8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 STIM1Q13586 685 aa8.58□□□□□ -1.04
UBE2D3-224ENST00000508474 HSP90AB2PQ58FF8 381 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms