RNA–Protein interactions for RNA: ENST00000508472.5

DDR1-264, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 836 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-264ENST00000508472 PARP4Q9UKK3 1724 aaKnown RBP21.92■■□□□ 1.1
DDR1-264ENST00000508472 USP31Q70CQ4 1352 aa21.92■■□□□ 1.1
DDR1-264ENST00000508472 WDR17Q8IZU2 1322 aa21.92■■□□□ 1.1
DDR1-264ENST00000508472 CDCA7Q9BWT1 371 aaPredicted RBP21.92■■□□□ 1.1
DDR1-264ENST00000508472 CSB-PGBD3P0DP91 1061 aa21.91■■□□□ 1.1
DDR1-264ENST00000508472 SLC12A5Q9H2X9 1139 aa21.91■■□□□ 1.1
DDR1-264ENST00000508472 USP54Q70EL1 1684 aa21.91■■□□□ 1.1
DDR1-264ENST00000508472 CD163L1Q9NR16 1453 aa21.9■■□□□ 1.1
DDR1-264ENST00000508472 DISP2A7MBM2 1401 aa21.89■■□□□ 1.1
DDR1-264ENST00000508472 TMF1P82094 1093 aa21.89■■□□□ 1.09
DDR1-264ENST00000508472 TESK2Q96S53 571 aa21.89■■□□□ 1.09
DDR1-264ENST00000508472 NFAT5O94916 1531 aa21.89■■□□□ 1.09
DDR1-264ENST00000508472 TNS1Q9HBL0 1735 aaKnown RBP21.89■■□□□ 1.09
DDR1-264ENST00000508472 TRIM37O94972 964 aa21.88■■□□□ 1.09
DDR1-264ENST00000508472 CDCA8Q53HL2 280 aa21.88■■□□□ 1.09
DDR1-264ENST00000508472 A0A1W2PP64 1363 aa21.87■■□□□ 1.09
DDR1-264ENST00000508472 USP47Q96K76 1375 aa21.87■■□□□ 1.09
DDR1-264ENST00000508472 EN1Q05925 392 aaPredicted RBP21.87■■□□□ 1.09
DDR1-264ENST00000508472 DDB1Q16531 1140 aa21.87■■□□□ 1.09
DDR1-264ENST00000508472 NME9Q86XW9 330 aa21.87■■□□□ 1.09
DDR1-264ENST00000508472 PCGF6Q9BYE7 350 aa21.87■■□□□ 1.09
DDR1-264ENST00000508472 AXIN2Q9Y2T1 843 aa21.87■■□□□ 1.09
DDR1-264ENST00000508472 RGPD5Q99666 1765 aa21.87■■□□□ 1.09
DDR1-264ENST00000508472 PARD3Q8TEW0 1356 aa21.87■■□□□ 1.09
DDR1-264ENST00000508472 CARD10Q9BWT7 1032 aa21.86■■□□□ 1.09
DDR1-264ENST00000508472 OVOS2A0A0G2JMS6 1433 aa21.84■■□□□ 1.09
DDR1-264ENST00000508472 OVOS2A0A0J9YW53 1432 aa21.84■■□□□ 1.09
DDR1-264ENST00000508472 OVOS2Q6IE36 1432 aa21.84■■□□□ 1.09
DDR1-264ENST00000508472 APBA3O96018 575 aa21.84■■□□□ 1.09
DDR1-264ENST00000508472 WNK3Q9BYP7 1800 aa21.84■■□□□ 1.09
DDR1-264ENST00000508472 CCDC7Q96M83 1385 aa21.84■■□□□ 1.09
DDR1-264ENST00000508472 LTN1O94822 1766 aa21.84■■□□□ 1.09
DDR1-264ENST00000508472 LRRC37A3O60309 1634 aa21.81■■□□□ 1.08
DDR1-264ENST00000508472 COG3Q96JB2 828 aa21.81■■□□□ 1.08
DDR1-264ENST00000508472 ANKRD36BQ8N2N9 1353 aa21.8■■□□□ 1.08
DDR1-264ENST00000508472 EZH2Q15910 746 aaKnown RBP21.79■■□□□ 1.08
DDR1-264ENST00000508472 EXOC5O00471 708 aa21.78■■□□□ 1.08
DDR1-264ENST00000508472 CAMKK2Q96RR4 588 aa21.78■■□□□ 1.08
DDR1-264ENST00000508472 NLRP2Q9NX02 1062 aa21.77■■□□□ 1.08
DDR1-264ENST00000508472 ERBB3P21860 1342 aa21.77■■□□□ 1.07
DDR1-264ENST00000508472 PEAK1Q9H792 1746 aa21.75■■□□□ 1.07
DDR1-264ENST00000508472 SRCAPQ6ZRS2 3230 aa21.75■■□□□ 1.07
DDR1-264ENST00000508472 NBPF14Q5TI25 921 aa21.75■■□□□ 1.07
DDR1-264ENST00000508472 SBF2Q86WG5 1849 aa21.74■■□□□ 1.07
DDR1-264ENST00000508472 PSDA5PKW4 1024 aaPredicted RBP21.74■■□□□ 1.07
DDR1-264ENST00000508472 ANKRD24Q8TF21 1146 aa21.74■■□□□ 1.07
DDR1-264ENST00000508472 BCL9O00512 1426 aa21.73■■□□□ 1.07
DDR1-264ENST00000508472 FAM208AQ9UK61 1670 aaKnown RBP21.73■■□□□ 1.07
DDR1-264ENST00000508472 CCER1Q8TC90 406 aaPredicted RBP21.73■■□□□ 1.07
DDR1-264ENST00000508472 IP6K1Q92551 441 aa21.73■■□□□ 1.07
DDR1-264ENST00000508472 BCL11BQ9C0K0 894 aaPredicted RBP21.73■■□□□ 1.07
DDR1-264ENST00000508472 LRP5O75197 1615 aa21.73■■□□□ 1.07
DDR1-264ENST00000508472 RREB1Q92766 1687 aa21.72■■□□□ 1.07
DDR1-264ENST00000508472 R3HDM1Q15032 1099 aaKnown RBP21.72■■□□□ 1.07
DDR1-264ENST00000508472 TNS2Q63HR2 1409 aa21.72■■□□□ 1.07
DDR1-264ENST00000508472 RGPD3A6NKT7 1758 aaPredicted RBP21.71■■□□□ 1.07
DDR1-264ENST00000508472 RGPD4Q7Z3J3 1758 aa21.71■■□□□ 1.07
DDR1-264ENST00000508472 IL2RBP14784 551 aa21.71■■□□□ 1.07
DDR1-264ENST00000508472 PLSCR1O15162 318 aa21.7■■□□□ 1.06
DDR1-264ENST00000508472 AMPHP49418 695 aa21.7■■□□□ 1.06
DDR1-264ENST00000508472 MARCH10Q8NA82 808 aaPredicted RBP21.7■■□□□ 1.06
DDR1-264ENST00000508472 NUP188Q5SRE5 1749 aa21.68■■□□□ 1.06
DDR1-264ENST00000508472 KIF20BQ96Q89 1820 aa21.67■■□□□ 1.06
DDR1-264ENST00000508472 RTL1A6NKG5 1358 aa21.67■■□□□ 1.06
DDR1-264ENST00000508472 MAP3K19Q56UN5 1328 aa21.66■■□□□ 1.06
DDR1-264ENST00000508472 FYB1O15117 783 aa21.66■■□□□ 1.06
DDR1-264ENST00000508472 HOXC9P31274 260 aa21.65■■□□□ 1.06
DDR1-264ENST00000508472 LTV1Q96GA3 475 aaPredicted RBP21.65■■□□□ 1.06
DDR1-264ENST00000508472 SMG6Q86US8 1419 aaKnown RBP21.64■■□□□ 1.06
DDR1-264ENST00000508472 GGNBP2Q9H3C7 697 aa21.64■■□□□ 1.05
DDR1-264ENST00000508472 EIF4G2P78344 907 aaKnown RBP eCLIP21.63■■□□□ 1.058e-8■■■■■ 39.6
DDR1-264ENST00000508472 MYOM1P52179 1685 aa21.62■■□□□ 1.05
DDR1-264ENST00000508472 KIF24Q5T7B8 1368 aa21.61■■□□□ 1.05
DDR1-264ENST00000508472 NHSQ6T4R5 1651 aa21.6■■□□□ 1.05
DDR1-264ENST00000508472 NSD3Q9BZ95 1437 aa21.59■■□□□ 1.05
DDR1-264ENST00000508472 CGNL1Q0VF96 1302 aa21.58■■□□□ 1.05
DDR1-264ENST00000508472 RRS1Q15050 365 aaKnown RBP21.58■■□□□ 1.05
DDR1-264ENST00000508472 POLR3GLQ9BT43 218 aa21.58■■□□□ 1.05
DDR1-264ENST00000508472 FLT4P35916 1363 aa21.57■■□□□ 1.04
DDR1-264ENST00000508472 KAT6BQ8WYB5 2073 aa21.56■■□□□ 1.04
DDR1-264ENST00000508472 FBLN1P23142 703 aa21.55■■□□□ 1.04
DDR1-264ENST00000508472 DDX54Q8TDD1 881 aaKnown RBP21.55■■□□□ 1.04
DDR1-264ENST00000508472 CARD14Q9BXL6 1004 aa21.55■■□□□ 1.04
DDR1-264ENST00000508472 INSRP06213 1382 aa21.54■■□□□ 1.04
DDR1-264ENST00000508472 TXNRD1Q16881 649 aa21.54■■□□□ 1.04
DDR1-264ENST00000508472 PTF1AQ7RTS3 328 aa21.54■■□□□ 1.04
DDR1-264ENST00000508472 RAPGEF4Q8WZA2 1011 aa21.54■■□□□ 1.04
DDR1-264ENST00000508472 ACSBG1Q96GR2 724 aa21.54■■□□□ 1.04
DDR1-264ENST00000508472 RGPD2P0DJD1 1756 aa21.53■■□□□ 1.04
DDR1-264ENST00000508472 KCNQ2O43526 872 aa21.53■■□□□ 1.04
DDR1-264ENST00000508472 ZCRB1Q8TBF4 217 aaKnown RBP21.53■■□□□ 1.04
DDR1-264ENST00000508472 STK32BQ9NY57 414 aa21.53■■□□□ 1.04
DDR1-264ENST00000508472 HSPA5P11021 654 aaKnown RBP21.52■■□□□ 1.04
DDR1-264ENST00000508472 SPON1Q9HCB6 807 aa21.52■■□□□ 1.04
DDR1-264ENST00000508472 BTAF1O14981 1849 aa21.51■■□□□ 1.03
DDR1-264ENST00000508472 NBPF6Q5VWK0 638 aa21.5■■□□□ 1.03
DDR1-264ENST00000508472 PROM2Q8N271 834 aa21.5■■□□□ 1.03
DDR1-264ENST00000508472 NBPF4Q96M43 638 aa21.5■■□□□ 1.03
DDR1-264ENST00000508472 TATP17735 454 aaPredicted RBP21.49■■□□□ 1.03
DDR1-264ENST00000508472 HSP90AB2PQ58FF8 381 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms