RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 POTEAQ6S8J7 498 aa13.89□□□□□ -0.19
HTT-204ENST00000508321 C8orf37Q96NL8 207 aa13.89□□□□□ -0.19
HTT-204ENST00000508321 WNK3Q9BYP7 1800 aa13.88□□□□□ -0.19
HTT-204ENST00000508321 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
HTT-204ENST00000508321 FNBP4Q8N3X1 1017 aaPredicted RBP13.88□□□□□ -0.19
HTT-204ENST00000508321 BCL9LQ86UU0 1499 aa13.87□□□□□ -0.19
HTT-204ENST00000508321 INSRP06213 1382 aa13.87□□□□□ -0.19
HTT-204ENST00000508321 AMPHP49418 695 aa13.87□□□□□ -0.19
HTT-204ENST00000508321 IP6K1Q92551 441 aa13.87□□□□□ -0.19
HTT-204ENST00000508321 FAM83GA6ND36 823 aa13.86□□□□□ -0.19
HTT-204ENST00000508321 HOXC9P31274 260 aa13.86□□□□□ -0.19
HTT-204ENST00000508321 RRS1Q15050 365 aaKnown RBP13.86□□□□□ -0.19
HTT-204ENST00000508321 NGLY1Q96IV0 654 aa13.86□□□□□ -0.19
HTT-204ENST00000508321 POLKQ9UBT6 870 aa13.86□□□□□ -0.19
HTT-204ENST00000508321 ERBB3P21860 1342 aa13.86□□□□□ -0.19
HTT-204ENST00000508321 AFF2P51816 1311 aa13.86□□□□□ -0.19
HTT-204ENST00000508321 MYBBP1AQ9BQG0 1328 aaKnown RBP13.86□□□□□ -0.19
HTT-204ENST00000508321 ATRNO75882 1429 aa13.85□□□□□ -0.19
HTT-204ENST00000508321 TNNT2P45379 298 aaPredicted RBP13.85□□□□□ -0.19
HTT-204ENST00000508321 ZNF772Q68DY9 489 aaPredicted RBP13.85□□□□□ -0.19
HTT-204ENST00000508321 PRKRIP1Q9H875 184 aaPredicted RBP13.85□□□□□ -0.19
HTT-204ENST00000508321 COL3A1P02461 1466 aaPredicted RBP13.85□□□□□ -0.19
HTT-204ENST00000508321 RGPD1P0DJD0 1748 aa13.84□□□□□ -0.19
HTT-204ENST00000508321 CRB1P82279 1406 aa13.84□□□□□ -0.19
HTT-204ENST00000508321 ANP32CO43423 234 aa13.84□□□□□ -0.19
HTT-204ENST00000508321 CHRNA2Q15822 529 aa13.84□□□□□ -0.19
HTT-204ENST00000508321 UNC5CLQ8IV45 518 aa13.84□□□□□ -0.19
HTT-204ENST00000508321 BTG4Q9NY30 223 aa13.84□□□□□ -0.19
HTT-204ENST00000508321 EMILIN1Q9Y6C2 1016 aa13.84□□□□□ -0.19
HTT-204ENST00000508321 WDR17Q8IZU2 1322 aa13.84□□□□□ -0.19
HTT-204ENST00000508321 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.19
HTT-204ENST00000508321 ZBTB7CA1YPR0 619 aa13.83□□□□□ -0.2
HTT-204ENST00000508321 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
HTT-204ENST00000508321 CFAP53Q96M91 514 aa13.83□□□□□ -0.2
HTT-204ENST00000508321 USP21Q9UK80 565 aa13.83□□□□□ -0.2
HTT-204ENST00000508321 NCAPD2Q15021 1401 aa13.82□□□□□ -0.2
HTT-204ENST00000508321 PARP4Q9UKK3 1724 aaKnown RBP13.82□□□□□ -0.2
HTT-204ENST00000508321 TRPC5Q9UL62 973 aaPredicted RBP13.82□□□□□ -0.2
HTT-204ENST00000508321 RGPD2P0DJD1 1756 aa13.81□□□□□ -0.2
HTT-204ENST00000508321 PPM1GO15355 546 aaPredicted RBP13.81□□□□□ -0.2
HTT-204ENST00000508321 MTHFSP49914 203 aa13.81□□□□□ -0.2
HTT-204ENST00000508321 VPS72Q15906 364 aa13.81□□□□□ -0.2
HTT-204ENST00000508321 GLI3P10071 1580 aa13.8□□□□□ -0.2
HTT-204ENST00000508321 THSD7AQ9UPZ6 1657 aa13.8□□□□□ -0.2
HTT-204ENST00000508321 ANKRD24Q8TF21 1146 aa13.8□□□□□ -0.2
HTT-204ENST00000508321 AXIN2Q9Y2T1 843 aa13.8□□□□□ -0.2
HTT-204ENST00000508321 CSB-PGBD3P0DP91 1061 aa13.79□□□□□ -0.2
HTT-204ENST00000508321 FBLN1P23142 703 aa13.79□□□□□ -0.2
HTT-204ENST00000508321 EVA1CP58658 441 aa13.79□□□□□ -0.2
HTT-204ENST00000508321 CNGB1Q14028 1251 aaPredicted RBP13.79□□□□□ -0.2
HTT-204ENST00000508321 HSP90AB2PQ58FF8 381 aa13.79□□□□□ -0.2
HTT-204ENST00000508321 DIEXFQ68CQ4 756 aaKnown RBP13.78□□□□□ -0.2
HTT-204ENST00000508321 STRN4Q9NRL3 753 aa13.78□□□□□ -0.2
HTT-204ENST00000508321 THRAP3Q9Y2W1 955 aaKnown RBP13.78□□□□□ -0.2
HTT-204ENST00000508321 SPATA31A5Q5VU36 1347 aa13.78□□□□□ -0.2
HTT-204ENST00000508321 SPATA31A7Q8IWB4 1347 aa13.78□□□□□ -0.2
HTT-204ENST00000508321 LRRC37A3O60309 1634 aa13.77□□□□□ -0.21
HTT-204ENST00000508321 SPATA31A1Q5TZJ5 1347 aa13.77□□□□□ -0.21
HTT-204ENST00000508321 TOM1L2Q6ZVM7 507 aa13.77□□□□□ -0.21
HTT-204ENST00000508321 CARD10Q9BWT7 1032 aa13.77□□□□□ -0.21
HTT-204ENST00000508321 PKD1L3Q7Z443 1732 aa13.76□□□□□ -0.21
HTT-204ENST00000508321 IGSF1Q8N6C5 1336 aa13.76□□□□□ -0.21
HTT-204ENST00000508321 DIAPH1O60610 1272 aaKnown RBP13.76□□□□□ -0.21
HTT-204ENST00000508321 EIF4A2Q14240 407 aaKnown RBP13.76□□□□□ -0.21
HTT-204ENST00000508321 LARP1Q6PKG0 1096 aaKnown RBP13.76□□□□□ -0.21
HTT-204ENST00000508321 CDCA7Q9BWT1 371 aaPredicted RBP13.76□□□□□ -0.21
HTT-204ENST00000508321 DISP2A7MBM2 1401 aa13.75□□□□□ -0.21
HTT-204ENST00000508321 KDRP35968 1356 aa13.75□□□□□ -0.21
HTT-204ENST00000508321 RBM6P78332 1123 aaKnown RBP13.75□□□□□ -0.21
HTT-204ENST00000508321 BARGINQ6ZT62 677 aa13.75□□□□□ -0.21
HTT-204ENST00000508321 TCP11L2Q8N4U5 519 aa13.75□□□□□ -0.21
HTT-204ENST00000508321 GJD4Q96KN9 370 aaPredicted RBP13.75□□□□□ -0.21
HTT-204ENST00000508321 NUDCQ9Y266 331 aa13.75□□□□□ -0.21
HTT-204ENST00000508321 IL13P35225 146 aa13.74□□□□□ -0.21
HTT-204ENST00000508321 LTV1Q96GA3 475 aaPredicted RBP13.74□□□□□ -0.21
HTT-204ENST00000508321 NLRP2Q9NX02 1062 aa13.74□□□□□ -0.21
HTT-204ENST00000508321 CCDC9Q9Y3X0 531 aaKnown RBP13.74□□□□□ -0.21
HTT-204ENST00000508321 QTRT2Q9H974 415 aaKnown RBP13.73□□□□□ -0.21
HTT-204ENST00000508321 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
HTT-204ENST00000508321 TNS2Q63HR2 1409 aa13.73□□□□□ -0.21
HTT-204ENST00000508321 SHANK3Q9BYB0 1731 aa13.72□□□□□ -0.21
HTT-204ENST00000508321 MEGF6O75095 1541 aa13.71□□□□□ -0.21
HTT-204ENST00000508321 NBPF6Q5VWK0 638 aa13.71□□□□□ -0.21
HTT-204ENST00000508321 NBPF4Q96M43 638 aa13.71□□□□□ -0.21
HTT-204ENST00000508321 EYA1Q99502 592 aa13.71□□□□□ -0.21
HTT-204ENST00000508321 ONECUT3O60422 494 aaPredicted RBP13.7□□□□□ -0.22
HTT-204ENST00000508321 IL2RBP14784 551 aa13.7□□□□□ -0.22
HTT-204ENST00000508321 RXRBP28702 533 aa13.7□□□□□ -0.22
HTT-204ENST00000508321 RGS12O14924 1447 aa13.7□□□□□ -0.22
HTT-204ENST00000508321 BRWD3Q6RI45 1802 aa13.69□□□□□ -0.22
HTT-204ENST00000508321 CCER2I3L3R5 266 aa13.69□□□□□ -0.22
HTT-204ENST00000508321 RAPGEF4Q8WZA2 1011 aa13.69□□□□□ -0.22
HTT-204ENST00000508321 USP35Q9P2H5 1018 aa13.69□□□□□ -0.22
HTT-204ENST00000508321 UPF1Q92900 1129 aaKnown RBP eCLIP13.68□□□□□ -0.22
HTT-204ENST00000508321 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
HTT-204ENST00000508321 U2SURPO15042 1029 aaKnown RBP13.67□□□□□ -0.22
HTT-204ENST00000508321 WDR43Q15061 677 aaKnown RBP eCLIP13.67□□□□□ -0.22
HTT-204ENST00000508321 PNNQ9H307 717 aaKnown RBP13.67□□□□□ -0.22
HTT-204ENST00000508321 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.22
HTT-204ENST00000508321 FCHSD2O94868 740 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms