RNA–Protein interactions for RNA: ENST00000508317.5

DDR1-263, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-263ENST00000508317 COL5A2P05997 1499 aaPredicted RBP23.11■■□□□ 1.29
DDR1-263ENST00000508317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.1■■□□□ 1.29
DDR1-263ENST00000508317 TRPM1Q7Z4N2 1603 aa23.1■■□□□ 1.29
DDR1-263ENST00000508317 WDR17Q8IZU2 1322 aa23.09■■□□□ 1.29
DDR1-263ENST00000508317 ARHGEF25Q86VW2 580 aa23.08■■□□□ 1.29
DDR1-263ENST00000508317 SBNO2Q9Y2G9 1366 aa23.08■■□□□ 1.29
DDR1-263ENST00000508317 RREB1Q92766 1687 aa23.08■■□□□ 1.29
DDR1-263ENST00000508317 NUP188Q5SRE5 1749 aa23.07■■□□□ 1.28
DDR1-263ENST00000508317 OVOS2A0A0G2JMS6 1433 aa23.07■■□□□ 1.28
DDR1-263ENST00000508317 OVOS2A0A0J9YW53 1432 aa23.07■■□□□ 1.28
DDR1-263ENST00000508317 OVOS2Q6IE36 1432 aa23.07■■□□□ 1.28
DDR1-263ENST00000508317 CPSF1Q10570 1443 aaKnown RBP23.06■■□□□ 1.28
DDR1-263ENST00000508317 SLIT3O75094 1523 aa23.05■■□□□ 1.28
DDR1-263ENST00000508317 EXOC5O00471 708 aa23.05■■□□□ 1.28
DDR1-263ENST00000508317 CARD10Q9BWT7 1032 aa23.05■■□□□ 1.28
DDR1-263ENST00000508317 PUS7Q96PZ0 661 aaKnown RBP23.03■■□□□ 1.28
DDR1-263ENST00000508317 LMO7Q8WWI1 1683 aa23.03■■□□□ 1.28
DDR1-263ENST00000508317 AXIN2Q9Y2T1 843 aa23.02■■□□□ 1.28
DDR1-263ENST00000508317 CCDC7Q96M83 1385 aa23.01■■□□□ 1.27
DDR1-263ENST00000508317 BCL11BQ9C0K0 894 aaPredicted RBP23■■□□□ 1.27
DDR1-263ENST00000508317 NLRP2Q9NX02 1062 aa23■■□□□ 1.27
DDR1-263ENST00000508317 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
DDR1-263ENST00000508317 PPP1R1BQ9UD71 204 aaPredicted RBP22.99■■□□□ 1.27
DDR1-263ENST00000508317 SLC12A5Q9H2X9 1139 aa22.98■■□□□ 1.27
DDR1-263ENST00000508317 NME9Q86XW9 330 aa22.97■■□□□ 1.27
DDR1-263ENST00000508317 NINLQ9Y2I6 1382 aa22.97■■□□□ 1.27
DDR1-263ENST00000508317 PLSCR1O15162 318 aa22.96■■□□□ 1.27
DDR1-263ENST00000508317 USP31Q70CQ4 1352 aa22.96■■□□□ 1.27
DDR1-263ENST00000508317 PIK3C2AO00443 1686 aa22.96■■□□□ 1.27
DDR1-263ENST00000508317 EDC4Q6P2E9 1401 aaKnown RBP22.95■■□□□ 1.26
DDR1-263ENST00000508317 COG3Q96JB2 828 aa22.94■■□□□ 1.26
DDR1-263ENST00000508317 SPON1Q9HCB6 807 aa22.94■■□□□ 1.26
DDR1-263ENST00000508317 CDCA8Q53HL2 280 aa22.93■■□□□ 1.26
DDR1-263ENST00000508317 MARCH10Q8NA82 808 aaPredicted RBP22.93■■□□□ 1.26
DDR1-263ENST00000508317 ST20-MTHFSA0A0A6YYL1 179 aa22.92■■□□□ 1.26
DDR1-263ENST00000508317 KCNQ2O43526 872 aa22.92■■□□□ 1.26
DDR1-263ENST00000508317 IL2RBP14784 551 aa22.92■■□□□ 1.26
DDR1-263ENST00000508317 ANKRD24Q8TF21 1146 aa22.92■■□□□ 1.26
DDR1-263ENST00000508317 PARP4Q9UKK3 1724 aaKnown RBP22.91■■□□□ 1.26
DDR1-263ENST00000508317 TMF1P82094 1093 aa22.91■■□□□ 1.26
DDR1-263ENST00000508317 ABCC6O95255 1503 aa22.91■■□□□ 1.26
DDR1-263ENST00000508317 ERBB3P21860 1342 aa22.89■■□□□ 1.26
DDR1-263ENST00000508317 ZNF784Q8NCA9 323 aaPredicted RBP22.89■■□□□ 1.25
DDR1-263ENST00000508317 STK32BQ9NY57 414 aa22.89■■□□□ 1.25
DDR1-263ENST00000508317 AMPHP49418 695 aa22.88■■□□□ 1.25
DDR1-263ENST00000508317 PDGFDQ9GZP0 370 aaPredicted RBP22.88■■□□□ 1.25
DDR1-263ENST00000508317 A0A1W2PP64 1363 aa22.88■■□□□ 1.25
DDR1-263ENST00000508317 BCL9O00512 1426 aa22.87■■□□□ 1.25
DDR1-263ENST00000508317 AKAP12Q02952 1782 aa22.86■■□□□ 1.25
DDR1-263ENST00000508317 ANO8Q9HCE9 1232 aaPredicted RBP22.86■■□□□ 1.25
DDR1-263ENST00000508317 NFAT5O94916 1531 aa22.86■■□□□ 1.25
DDR1-263ENST00000508317 IP6K1Q92551 441 aa22.85■■□□□ 1.25
DDR1-263ENST00000508317 LTV1Q96GA3 475 aaPredicted RBP22.85■■□□□ 1.25
DDR1-263ENST00000508317 CASZ1Q86V15 1759 aa22.85■■□□□ 1.25
DDR1-263ENST00000508317 TNS2Q63HR2 1409 aa22.83■■□□□ 1.25
DDR1-263ENST00000508317 LRRC37A3O60309 1634 aa22.82■■□□□ 1.24
DDR1-263ENST00000508317 TXNRD1Q16881 649 aa22.82■■□□□ 1.24
DDR1-263ENST00000508317 TESK2Q96S53 571 aa22.82■■□□□ 1.24
DDR1-263ENST00000508317 COL18A1P39060 1754 aa22.81■■□□□ 1.24
DDR1-263ENST00000508317 CD163L1Q9NR16 1453 aa22.81■■□□□ 1.24
DDR1-263ENST00000508317 ACSBG1Q96GR2 724 aa22.81■■□□□ 1.24
DDR1-263ENST00000508317 MYOM1P52179 1685 aa22.81■■□□□ 1.24
DDR1-263ENST00000508317 MON2Q7Z3U7 1717 aa22.8■■□□□ 1.24
DDR1-263ENST00000508317 PTF1AQ7RTS3 328 aa22.8■■□□□ 1.24
DDR1-263ENST00000508317 TIMELESSQ9UNS1 1208 aa22.8■■□□□ 1.24
DDR1-263ENST00000508317 PEAK1Q9H792 1746 aa22.79■■□□□ 1.24
DDR1-263ENST00000508317 USP47Q96K76 1375 aa22.79■■□□□ 1.24
DDR1-263ENST00000508317 DDX54Q8TDD1 881 aaKnown RBP22.79■■□□□ 1.24
DDR1-263ENST00000508317 ANKRD36BQ8N2N9 1353 aa22.78■■□□□ 1.24
DDR1-263ENST00000508317 PTGER2P43116 358 aa22.78■■□□□ 1.24
DDR1-263ENST00000508317 SMG6Q86US8 1419 aaKnown RBP22.77■■□□□ 1.24
DDR1-263ENST00000508317 SENP3-EIF4A1A0A087X0R7 540 aa22.77■■□□□ 1.24
DDR1-263ENST00000508317 CCER1Q8TC90 406 aaPredicted RBP22.77■■□□□ 1.24
DDR1-263ENST00000508317 SLC15A2Q16348 729 aa22.76■■□□□ 1.23
DDR1-263ENST00000508317 SYTL4Q96C24 671 aaPredicted RBP22.75■■□□□ 1.23
DDR1-263ENST00000508317 MAP3K19Q56UN5 1328 aa22.75■■□□□ 1.23
DDR1-263ENST00000508317 CLSPNQ9HAW4 1339 aa22.75■■□□□ 1.23
DDR1-263ENST00000508317 RGPD3A6NKT7 1758 aaPredicted RBP22.74■■□□□ 1.23
DDR1-263ENST00000508317 RGPD4Q7Z3J3 1758 aa22.74■■□□□ 1.23
DDR1-263ENST00000508317 ZBTB7AO95365 584 aa22.74■■□□□ 1.23
DDR1-263ENST00000508317 HOXC9P31274 260 aa22.74■■□□□ 1.23
DDR1-263ENST00000508317 PROM2Q8N271 834 aa22.74■■□□□ 1.23
DDR1-263ENST00000508317 HMGB2P26583 209 aaKnown RBP22.73■■□□□ 1.23
DDR1-263ENST00000508317 IFFO2Q5TF58 517 aa22.73■■□□□ 1.23
DDR1-263ENST00000508317 RAPGEF4Q8WZA2 1011 aa22.73■■□□□ 1.23
DDR1-263ENST00000508317 C1QTNF8P60827 252 aa22.72■■□□□ 1.23
DDR1-263ENST00000508317 GGNBP2Q9H3C7 697 aa22.72■■□□□ 1.23
DDR1-263ENST00000508317 ZCRB1Q8TBF4 217 aaKnown RBP22.71■■□□□ 1.23
DDR1-263ENST00000508317 RTL1A6NKG5 1358 aa22.71■■□□□ 1.23
DDR1-263ENST00000508317 SLC27A3Q5K4L6 730 aa22.7■■□□□ 1.22
DDR1-263ENST00000508317 USP54Q70EL1 1684 aa22.69■■□□□ 1.22
DDR1-263ENST00000508317 CGNL1Q0VF96 1302 aa22.69■■□□□ 1.22
DDR1-263ENST00000508317 FYB1O15117 783 aa22.69■■□□□ 1.22
DDR1-263ENST00000508317 MTFR1LQ9H019 292 aa22.69■■□□□ 1.22
DDR1-263ENST00000508317 ATF5Q9Y2D1 282 aaPredicted RBP22.69■■□□□ 1.22
DDR1-263ENST00000508317 TATP17735 454 aaPredicted RBP22.68■■□□□ 1.22
DDR1-263ENST00000508317 RRS1Q15050 365 aaKnown RBP22.68■■□□□ 1.22
DDR1-263ENST00000508317 FHDC1Q9C0D6 1143 aaPredicted RBP22.68■■□□□ 1.22
DDR1-263ENST00000508317 RGPD5Q99666 1765 aa22.68■■□□□ 1.22
DDR1-263ENST00000508317 WNK3Q9BYP7 1800 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms