RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 COL18A1P39060 1754 aa13.07□□□□□ -0.32
DDX41-209ENST00000508279 AATKQ6ZMQ8 1374 aa13.07□□□□□ -0.32
DDX41-209ENST00000508279 EP400Q96L91 3159 aa13.06□□□□□ -0.32
DDX41-209ENST00000508279 TOM1L2Q6ZVM7 507 aa13.06□□□□□ -0.32
DDX41-209ENST00000508279 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
DDX41-209ENST00000508279 AXIN2Q9Y2T1 843 aa13.06□□□□□ -0.32
DDX41-209ENST00000508279 NFAT5O94916 1531 aa13.06□□□□□ -0.32
DDX41-209ENST00000508279 ANKRD36BQ8N2N9 1353 aa13.06□□□□□ -0.32
DDX41-209ENST00000508279 TCP11L2Q8N4U5 519 aa13.05□□□□□ -0.32
DDX41-209ENST00000508279 COG3Q96JB2 828 aa13.05□□□□□ -0.32
DDX41-209ENST00000508279 MYOM1P52179 1685 aa13.05□□□□□ -0.32
DDX41-209ENST00000508279 USP54Q70EL1 1684 aa13.05□□□□□ -0.32
DDX41-209ENST00000508279 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
DDX41-209ENST00000508279 USP31Q70CQ4 1352 aa13.05□□□□□ -0.32
DDX41-209ENST00000508279 SF3B2Q13435 895 aaKnown RBP13.04□□□□□ -0.32
DDX41-209ENST00000508279 KIF20BQ96Q89 1820 aa13.04□□□□□ -0.32
DDX41-209ENST00000508279 CRB1P82279 1406 aa13.04□□□□□ -0.32
DDX41-209ENST00000508279 GGNBP2Q9H3C7 697 aa13.03□□□□□ -0.32
DDX41-209ENST00000508279 FBLN1P23142 703 aa13.02□□□□□ -0.33
DDX41-209ENST00000508279 PDE3BQ13370 1112 aa13.02□□□□□ -0.33
DDX41-209ENST00000508279 BARGINQ6ZT62 677 aa13.02□□□□□ -0.33
DDX41-209ENST00000508279 CCDC125Q86Z20 511 aa13.01□□□□□ -0.33
DDX41-209ENST00000508279 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
DDX41-209ENST00000508279 THRAP3Q9Y2W1 955 aaKnown RBP13.01□□□□□ -0.33
DDX41-209ENST00000508279 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
DDX41-209ENST00000508279 OVOS2A0A0J9YW53 1432 aa13.01□□□□□ -0.33
DDX41-209ENST00000508279 OVOS2Q6IE36 1432 aa13.01□□□□□ -0.33
DDX41-209ENST00000508279 WNK3Q9BYP7 1800 aa13□□□□□ -0.33
DDX41-209ENST00000508279 BLMP54132 1417 aaPredicted RBP13□□□□□ -0.33
DDX41-209ENST00000508279 NSD3Q9BZ95 1437 aa13□□□□□ -0.33
DDX41-209ENST00000508279 DEFB132Q7Z7B7 95 aa13□□□□□ -0.33
DDX41-209ENST00000508279 FYB1O15117 783 aa12.99□□□□□ -0.33
DDX41-209ENST00000508279 AMPHP49418 695 aa12.99□□□□□ -0.33
DDX41-209ENST00000508279 NLRP2Q9NX02 1062 aa12.99□□□□□ -0.33
DDX41-209ENST00000508279 PARP4Q9UKK3 1724 aaKnown RBP12.99□□□□□ -0.33
DDX41-209ENST00000508279 RRS1Q15050 365 aaKnown RBP12.98□□□□□ -0.33
DDX41-209ENST00000508279 ANKRD24Q8TF21 1146 aa12.98□□□□□ -0.33
DDX41-209ENST00000508279 CARD14Q9BXL6 1004 aa12.98□□□□□ -0.33
DDX41-209ENST00000508279 RGPD1P0DJD0 1748 aa12.98□□□□□ -0.33
DDX41-209ENST00000508279 KAT6BQ8WYB5 2073 aa12.98□□□□□ -0.33
DDX41-209ENST00000508279 TRIM37O94972 964 aa12.97□□□□□ -0.33
DDX41-209ENST00000508279 DDB1Q16531 1140 aa12.97□□□□□ -0.33
DDX41-209ENST00000508279 CARD10Q9BWT7 1032 aa12.97□□□□□ -0.33
DDX41-209ENST00000508279 ABCC6O95255 1503 aa12.97□□□□□ -0.33
DDX41-209ENST00000508279 LRRC37A3O60309 1634 aa12.96□□□□□ -0.33
DDX41-209ENST00000508279 ERBB3P21860 1342 aa12.96□□□□□ -0.33
DDX41-209ENST00000508279 MAP3K19Q56UN5 1328 aa12.96□□□□□ -0.33
DDX41-209ENST00000508279 BAG6P46379 1132 aa12.96□□□□□ -0.33
DDX41-209ENST00000508279 FAM196AQ6ZSG2 479 aa12.96□□□□□ -0.33
DDX41-209ENST00000508279 IP6K1Q92551 441 aa12.96□□□□□ -0.33
DDX41-209ENST00000508279 RGPD2P0DJD1 1756 aa12.96□□□□□ -0.34
DDX41-209ENST00000508279 C11orf95C9JLR9 678 aaPredicted RBP12.95□□□□□ -0.34
DDX41-209ENST00000508279 HOXC9P31274 260 aa12.95□□□□□ -0.34
DDX41-209ENST00000508279 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
DDX41-209ENST00000508279 PANK3Q9H999 370 aa12.94□□□□□ -0.34
DDX41-209ENST00000508279 MAP2P11137 1827 aaKnown RBP12.94□□□□□ -0.34
DDX41-209ENST00000508279 CCDC7Q96M83 1385 aa12.94□□□□□ -0.34
DDX41-209ENST00000508279 TNS1Q9HBL0 1735 aaKnown RBP12.93□□□□□ -0.34
DDX41-209ENST00000508279 CGNL1Q0VF96 1302 aa12.93□□□□□ -0.34
DDX41-209ENST00000508279 EXOC5O00471 708 aa12.93□□□□□ -0.34
DDX41-209ENST00000508279 PPM1GO15355 546 aaPredicted RBP12.93□□□□□ -0.34
DDX41-209ENST00000508279 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
DDX41-209ENST00000508279 CDCA7Q9BWT1 371 aaPredicted RBP12.93□□□□□ -0.34
DDX41-209ENST00000508279 APBA3O96018 575 aa12.92□□□□□ -0.34
DDX41-209ENST00000508279 SBF2Q86WG5 1849 aa12.92□□□□□ -0.34
DDX41-209ENST00000508279 FAM208AQ9UK61 1670 aaKnown RBP12.92□□□□□ -0.34
DDX41-209ENST00000508279 OVOS2A0A0G2JMS6 1433 aa12.91□□□□□ -0.34
DDX41-209ENST00000508279 IL2RBP14784 551 aa12.91□□□□□ -0.34
DDX41-209ENST00000508279 PEAK1Q9H792 1746 aa12.91□□□□□ -0.34
DDX41-209ENST00000508279 ANKRD26Q9UPS8 1709 aa12.91□□□□□ -0.34
DDX41-209ENST00000508279 DISP2A7MBM2 1401 aa12.9□□□□□ -0.34
DDX41-209ENST00000508279 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
DDX41-209ENST00000508279 MARCH10Q8NA82 808 aaPredicted RBP12.9□□□□□ -0.34
DDX41-209ENST00000508279 EMILIN1Q9Y6C2 1016 aa12.9□□□□□ -0.34
DDX41-209ENST00000508279 KIF7Q2M1P5 1343 aa12.89□□□□□ -0.35
DDX41-209ENST00000508279 SMG6Q86US8 1419 aaKnown RBP12.89□□□□□ -0.35
DDX41-209ENST00000508279 EZH2Q15910 746 aaKnown RBP12.89□□□□□ -0.35
DDX41-209ENST00000508279 HSP90AB2PQ58FF8 381 aa12.89□□□□□ -0.35
DDX41-209ENST00000508279 RTL1A6NKG5 1358 aa12.89□□□□□ -0.35
DDX41-209ENST00000508279 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
DDX41-209ENST00000508279 FLT4P35916 1363 aa12.88□□□□□ -0.35
DDX41-209ENST00000508279 TNS2Q63HR2 1409 aa12.88□□□□□ -0.35
DDX41-209ENST00000508279 DDX54Q8TDD1 881 aaKnown RBP12.87□□□□□ -0.35
DDX41-209ENST00000508279 ACSBG1Q96GR2 724 aa12.87□□□□□ -0.35
DDX41-209ENST00000508279 KNSTRNQ9Y448 316 aa12.87□□□□□ -0.35
DDX41-209ENST00000508279 PSDA5PKW4 1024 aaPredicted RBP12.86□□□□□ -0.35
DDX41-209ENST00000508279 NBPF6Q5VWK0 638 aa12.86□□□□□ -0.35
DDX41-209ENST00000508279 PTF1AQ7RTS3 328 aa12.86□□□□□ -0.35
DDX41-209ENST00000508279 NBPF4Q96M43 638 aa12.86□□□□□ -0.35
DDX41-209ENST00000508279 INSRP06213 1382 aa12.85□□□□□ -0.35
DDX41-209ENST00000508279 MORC1Q86VD1 984 aa12.85□□□□□ -0.35
DDX41-209ENST00000508279 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
DDX41-209ENST00000508279 CAMKK2Q96RR4 588 aa12.84□□□□□ -0.35
DDX41-209ENST00000508279 POLKQ9UBT6 870 aa12.84□□□□□ -0.35
DDX41-209ENST00000508279 KCNQ2O43526 872 aa12.83□□□□□ -0.36
DDX41-209ENST00000508279 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
DDX41-209ENST00000508279 MEGF6O75095 1541 aa12.83□□□□□ -0.36
DDX41-209ENST00000508279 KIF24Q5T7B8 1368 aa12.82□□□□□ -0.36
DDX41-209ENST00000508279 TATP17735 454 aaPredicted RBP12.82□□□□□ -0.36
DDX41-209ENST00000508279 R3HDM1Q15032 1099 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms