RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 WNK3Q9BYP7 1800 aa20.16■□□□□ 0.82
RAB28-205ENST00000508274 KCNH5Q8NCM2 988 aa20.15■□□□□ 0.82
RAB28-205ENST00000508274 EDC4Q6P2E9 1401 aaKnown RBP20.14■□□□□ 0.82
RAB28-205ENST00000508274 HDGFL2Q7Z4V5 671 aaPredicted RBP20.14■□□□□ 0.81
RAB28-205ENST00000508274 THRAP3Q9Y2W1 955 aaKnown RBP20.14■□□□□ 0.81
RAB28-205ENST00000508274 USP47Q96K76 1375 aa20.14■□□□□ 0.81
RAB28-205ENST00000508274 LTN1O94822 1766 aa20.14■□□□□ 0.81
RAB28-205ENST00000508274 USP31Q70CQ4 1352 aa20.13■□□□□ 0.81
RAB28-205ENST00000508274 LRRC37A3O60309 1634 aa20.13■□□□□ 0.81
RAB28-205ENST00000508274 BAG6P46379 1132 aa20.12■□□□□ 0.81
RAB28-205ENST00000508274 PUS7Q96PZ0 661 aaKnown RBP20.12■□□□□ 0.81
RAB28-205ENST00000508274 TOM1L2Q6ZVM7 507 aa20.12■□□□□ 0.81
RAB28-205ENST00000508274 WDR17Q8IZU2 1322 aa20.11■□□□□ 0.81
RAB28-205ENST00000508274 EN1Q05925 392 aaPredicted RBP20.11■□□□□ 0.81
RAB28-205ENST00000508274 PDE3BQ13370 1112 aa20.11■□□□□ 0.81
RAB28-205ENST00000508274 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
RAB28-205ENST00000508274 TRIM37O94972 964 aa20.1■□□□□ 0.81
RAB28-205ENST00000508274 FAM196AQ6ZSG2 479 aa20.1■□□□□ 0.81
RAB28-205ENST00000508274 ABCC6O95255 1503 aa20.09■□□□□ 0.81
RAB28-205ENST00000508274 NINLQ9Y2I6 1382 aa20.09■□□□□ 0.81
RAB28-205ENST00000508274 OVOS2A0A0J9YW53 1432 aa20.09■□□□□ 0.81
RAB28-205ENST00000508274 DISP2A7MBM2 1401 aa20.09■□□□□ 0.81
RAB28-205ENST00000508274 OVOS2Q6IE36 1432 aa20.09■□□□□ 0.81
RAB28-205ENST00000508274 PEAK1Q9H792 1746 aa20.07■□□□□ 0.8
RAB28-205ENST00000508274 CLSPNQ9HAW4 1339 aa20.07■□□□□ 0.8
RAB28-205ENST00000508274 CSB-PGBD3P0DP91 1061 aa20.06■□□□□ 0.8
RAB28-205ENST00000508274 TMF1P82094 1093 aa20.04■□□□□ 0.8
RAB28-205ENST00000508274 SBF2Q86WG5 1849 aa20.04■□□□□ 0.8
RAB28-205ENST00000508274 SLC24A1O60721 1099 aa20.04■□□□□ 0.8
RAB28-205ENST00000508274 EZH2Q15910 746 aaKnown RBP20.04■□□□□ 0.8
RAB28-205ENST00000508274 CARD10Q9BWT7 1032 aa20.04■□□□□ 0.8
RAB28-205ENST00000508274 TIMELESSQ9UNS1 1208 aa20.04■□□□□ 0.8
RAB28-205ENST00000508274 ANKRD36BQ8N2N9 1353 aa20.03■□□□□ 0.8
RAB28-205ENST00000508274 DDB1Q16531 1140 aa20.03■□□□□ 0.8
RAB28-205ENST00000508274 MYOM1P52179 1685 aa20.03■□□□□ 0.8
RAB28-205ENST00000508274 OVOS2A0A0G2JMS6 1433 aa20.02■□□□□ 0.8
RAB28-205ENST00000508274 PSDA5PKW4 1024 aaPredicted RBP20.02■□□□□ 0.8
RAB28-205ENST00000508274 APBA3O96018 575 aa20.02■□□□□ 0.8
RAB28-205ENST00000508274 RREB1Q92766 1687 aa20.01■□□□□ 0.79
RAB28-205ENST00000508274 ERBB3P21860 1342 aa20.01■□□□□ 0.79
RAB28-205ENST00000508274 CAMKK2Q96RR4 588 aa20.01■□□□□ 0.79
RAB28-205ENST00000508274 NUP188Q5SRE5 1749 aa20■□□□□ 0.79
RAB28-205ENST00000508274 CCDC7Q96M83 1385 aa19.99■□□□□ 0.79
RAB28-205ENST00000508274 FBLN1P23142 703 aa19.98■□□□□ 0.79
RAB28-205ENST00000508274 MARCH10Q8NA82 808 aaPredicted RBP19.98■□□□□ 0.79
RAB28-205ENST00000508274 ANKRD24Q8TF21 1146 aa19.98■□□□□ 0.79
RAB28-205ENST00000508274 CDCA7Q9BWT1 371 aaPredicted RBP19.98■□□□□ 0.79
RAB28-205ENST00000508274 KIF20BQ96Q89 1820 aa19.98■□□□□ 0.79
RAB28-205ENST00000508274 COG3Q96JB2 828 aa19.97■□□□□ 0.79
RAB28-205ENST00000508274 CCER1Q8TC90 406 aaPredicted RBP19.96■□□□□ 0.79
RAB28-205ENST00000508274 NLRP2Q9NX02 1062 aa19.96■□□□□ 0.79
RAB28-205ENST00000508274 TNS2Q63HR2 1409 aa19.95■□□□□ 0.78
RAB28-205ENST00000508274 PTF1AQ7RTS3 328 aa19.95■□□□□ 0.78
RAB28-205ENST00000508274 PARD3Q8TEW0 1356 aa19.95■□□□□ 0.78
RAB28-205ENST00000508274 R3HDM1Q15032 1099 aaKnown RBP19.95■□□□□ 0.78
RAB28-205ENST00000508274 GGNBP2Q9H3C7 697 aa19.95■□□□□ 0.78
RAB28-205ENST00000508274 FAM208AQ9UK61 1670 aaKnown RBP19.95■□□□□ 0.78
RAB28-205ENST00000508274 MAP3K19Q56UN5 1328 aa19.94■□□□□ 0.78
RAB28-205ENST00000508274 RGPD2P0DJD1 1756 aa19.94■□□□□ 0.78
RAB28-205ENST00000508274 FYB1O15117 783 aa19.94■□□□□ 0.78
RAB28-205ENST00000508274 CDCA8Q53HL2 280 aa19.94■□□□□ 0.78
RAB28-205ENST00000508274 IP6K1Q92551 441 aa19.94■□□□□ 0.78
RAB28-205ENST00000508274 LRP5O75197 1615 aa19.94■□□□□ 0.78
RAB28-205ENST00000508274 LTV1Q96GA3 475 aaPredicted RBP19.93■□□□□ 0.78
RAB28-205ENST00000508274 RGPD3A6NKT7 1758 aaPredicted RBP19.93■□□□□ 0.78
RAB28-205ENST00000508274 RGPD4Q7Z3J3 1758 aa19.93■□□□□ 0.78
RAB28-205ENST00000508274 C11orf95C9JLR9 678 aaPredicted RBP19.92■□□□□ 0.78
RAB28-205ENST00000508274 EXOC5O00471 708 aa19.92■□□□□ 0.78
RAB28-205ENST00000508274 BCL9O00512 1426 aa19.92■□□□□ 0.78
RAB28-205ENST00000508274 HOXC9P31274 260 aa19.91■□□□□ 0.78
RAB28-205ENST00000508274 CARD14Q9BXL6 1004 aa19.91■□□□□ 0.78
RAB28-205ENST00000508274 IL2RBP14784 551 aa19.9■□□□□ 0.78
RAB28-205ENST00000508274 RRS1Q15050 365 aaKnown RBP19.9■□□□□ 0.78
RAB28-205ENST00000508274 NSD3Q9BZ95 1437 aa19.9■□□□□ 0.78
RAB28-205ENST00000508274 AMPHP49418 695 aa19.88■□□□□ 0.77
RAB28-205ENST00000508274 BCL11BQ9C0K0 894 aaPredicted RBP19.88■□□□□ 0.77
RAB28-205ENST00000508274 NHSQ6T4R5 1651 aa19.88■□□□□ 0.77
RAB28-205ENST00000508274 RTL1A6NKG5 1358 aa19.86■□□□□ 0.77
RAB28-205ENST00000508274 KAT6BQ8WYB5 2073 aa19.85■□□□□ 0.77
RAB28-205ENST00000508274 PLSCR1O15162 318 aa19.85■□□□□ 0.77
RAB28-205ENST00000508274 KCNQ2O43526 872 aa19.85■□□□□ 0.77
RAB28-205ENST00000508274 HSPA5P11021 654 aaKnown RBP19.85■□□□□ 0.77
RAB28-205ENST00000508274 POLR3GLQ9BT43 218 aa19.85■□□□□ 0.77
RAB28-205ENST00000508274 SHANK3Q9BYB0 1731 aa19.84■□□□□ 0.77
RAB28-205ENST00000508274 EIF4G2P78344 907 aaKnown RBP eCLIP19.83■□□□□ 0.77
RAB28-205ENST00000508274 ACSBG1Q96GR2 724 aa19.83■□□□□ 0.77
RAB28-205ENST00000508274 BTAF1O14981 1849 aa19.82■□□□□ 0.76
RAB28-205ENST00000508274 MEGF6O75095 1541 aa19.82■□□□□ 0.76
RAB28-205ENST00000508274 NBPF14Q5TI25 921 aa19.82■□□□□ 0.76
RAB28-205ENST00000508274 PROM2Q8N271 834 aa19.82■□□□□ 0.76
RAB28-205ENST00000508274 ANO8Q9HCE9 1232 aaPredicted RBP19.81■□□□□ 0.76
RAB28-205ENST00000508274 HSP90AB2PQ58FF8 381 aa19.8■□□□□ 0.76
RAB28-205ENST00000508274 USHBP1Q8N6Y0 703 aa19.8■□□□□ 0.76
RAB28-205ENST00000508274 ANKRD26Q9UPS8 1709 aa19.8■□□□□ 0.76
RAB28-205ENST00000508274 NBPF6Q5VWK0 638 aa19.79■□□□□ 0.76
RAB28-205ENST00000508274 NBPF4Q96M43 638 aa19.79■□□□□ 0.76
RAB28-205ENST00000508274 MAP2P11137 1827 aaKnown RBP19.79■□□□□ 0.76
RAB28-205ENST00000508274 DOT1LQ8TEK3 1739 aa19.79■□□□□ 0.76
RAB28-205ENST00000508274 FLT4P35916 1363 aa19.79■□□□□ 0.76
RAB28-205ENST00000508274 DDX54Q8TDD1 881 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms