RNA–Protein interactions for RNA: ENST00000508108.2

CBX3P3-201, Transcript of chromobox 3 pseudogene 3, humanhuman

BASIC

Gene CBX3P3, Length 532 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P3-201ENST00000508108 MRPL14Q6P1L8 145 aaKnown RBP8.78□□□□□ -1
CBX3P3-201ENST00000508108 KCTD15Q96SI1 283 aaPredicted RBP8.78□□□□□ -1
CBX3P3-201ENST00000508108 CDV3Q9UKY7 258 aaKnown RBP8.78□□□□□ -1
CBX3P3-201ENST00000508108 SCARF1Q14162 830 aa8.77□□□□□ -1.01
CBX3P3-201ENST00000508108 BANK1Q8NDB2 785 aa8.77□□□□□ -1.01
CBX3P3-201ENST00000508108 ZFP42Q96MM3 310 aa8.77□□□□□ -1.01
CBX3P3-201ENST00000508108 PURBQ96QR8 312 aaKnown RBP8.77□□□□□ -1.01
CBX3P3-201ENST00000508108 SNRKQ9NRH2 765 aa8.77□□□□□ -1.01
CBX3P3-201ENST00000508108 DZIP3Q86Y13 1208 aaKnown RBP8.76□□□□□ -1.01
CBX3P3-201ENST00000508108 EMILIN1Q9Y6C2 1016 aa8.76□□□□□ -1.01
CBX3P3-201ENST00000508108 RAB15P59190 212 aa8.75□□□□□ -1.01
CBX3P3-201ENST00000508108 C6orf118Q5T5N4 469 aa8.75□□□□□ -1.01
CBX3P3-201ENST00000508108 PPP1R26Q5T8A7 1209 aaPredicted RBP8.75□□□□□ -1.01
CBX3P3-201ENST00000508108 MTMR14Q8NCE2 650 aa8.75□□□□□ -1.01
CBX3P3-201ENST00000508108 ZBBXA8MT70 800 aa8.74□□□□□ -1.01
CBX3P3-201ENST00000508108 NBPF20Q3BBV1 942 aa8.74□□□□□ -1.01
CBX3P3-201ENST00000508108 INTS6LQ5JSJ4 861 aaKnown RBP8.74□□□□□ -1.01
CBX3P3-201ENST00000508108 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
CBX3P3-201ENST00000508108 PCDHB9Q9Y5E1 797 aa8.73□□□□□ -1.01
CBX3P3-201ENST00000508108 NDUFB9Q9Y6M9 179 aa8.73□□□□□ -1.01
CBX3P3-201ENST00000508108 UPP2O95045 317 aa8.72□□□□□ -1.01
CBX3P3-201ENST00000508108 FBXO45P0C2W1 286 aa8.72□□□□□ -1.01
CBX3P3-201ENST00000508108 DHX9Q08211 1270 aaKnown RBP8.72□□□□□ -1.01
CBX3P3-201ENST00000508108 LINC00528Q8N1L1 170 aa8.72□□□□□ -1.01
CBX3P3-201ENST00000508108 MEIOBQ8N635 442 aa8.72□□□□□ -1.01
CBX3P3-201ENST00000508108 APBB1O00213 710 aa8.71□□□□□ -1.02
CBX3P3-201ENST00000508108 BMP2P12643 396 aa8.71□□□□□ -1.02
CBX3P3-201ENST00000508108 CBLBQ13191 982 aa8.71□□□□□ -1.02
CBX3P3-201ENST00000508108 SOBPA7XYQ1 873 aa8.7□□□□□ -1.02
CBX3P3-201ENST00000508108 TMPRSS4Q9NRS4 437 aa8.7□□□□□ -1.02
CBX3P3-201ENST00000508108 SOCS7O14512 581 aa8.69□□□□□ -1.02
CBX3P3-201ENST00000508108 TREML4Q6UXN2 200 aa8.69□□□□□ -1.02
CBX3P3-201ENST00000508108 WFS1O76024 890 aa8.68□□□□□ -1.02
CBX3P3-201ENST00000508108 NR1H3Q13133 447 aa8.68□□□□□ -1.02
CBX3P3-201ENST00000508108 ERVH48-1M5A8F1 160 aa8.67□□□□□ -1.02
CBX3P3-201ENST00000508108 TERTO14746 1132 aaKnown RBP8.67□□□□□ -1.02
CBX3P3-201ENST00000508108 GPR37L1O60883 481 aa8.67□□□□□ -1.02
CBX3P3-201ENST00000508108 TSEN34Q9BSV6 310 aaKnown RBP8.67□□□□□ -1.02
CBX3P3-201ENST00000508108 TBC1D2BQ9UPU7 963 aa8.67□□□□□ -1.02
CBX3P3-201ENST00000508108 ESPNB1AK53 854 aa8.66□□□□□ -1.02
CBX3P3-201ENST00000508108 MAN1A2O60476 641 aa8.66□□□□□ -1.02
CBX3P3-201ENST00000508108 NFX1Q12986 1120 aaKnown RBP8.66□□□□□ -1.02
CBX3P3-201ENST00000508108 Q6ZVU0 165 aa8.66□□□□□ -1.02
CBX3P3-201ENST00000508108 ZNF784Q8NCA9 323 aaPredicted RBP8.66□□□□□ -1.02
CBX3P3-201ENST00000508108 GIGYF1O75420 1035 aaPredicted RBP8.65□□□□□ -1.02
CBX3P3-201ENST00000508108 AGBL1Q96MI9 1066 aa8.65□□□□□ -1.02
CBX3P3-201ENST00000508108 PRM3Q9NNZ6 103 aa8.65□□□□□ -1.02
CBX3P3-201ENST00000508108 NXF1Q9UBU9 619 aaKnown RBP8.65□□□□□ -1.02
CBX3P3-201ENST00000508108 ZNF330Q9Y3S2 320 aaPredicted RBP8.65□□□□□ -1.02
CBX3P3-201ENST00000508108 VEGFBP49765 207 aa8.64□□□□□ -1.03
CBX3P3-201ENST00000508108 RELBQ01201 579 aa8.64□□□□□ -1.03
CBX3P3-201ENST00000508108 CYLDQ9NQC7 956 aa8.64□□□□□ -1.03
CBX3P3-201ENST00000508108 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
CBX3P3-201ENST00000508108 SEPT12Q8IYM1 358 aa8.63□□□□□ -1.03
CBX3P3-201ENST00000508108 SOS2Q07890 1332 aaPredicted RBP8.62□□□□□ -1.03
CBX3P3-201ENST00000508108 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
CBX3P3-201ENST00000508108 FIGNL2A6NMB9 653 aa8.61□□□□□ -1.03
CBX3P3-201ENST00000508108 TTLL8A6PVC2 850 aa8.61□□□□□ -1.03
CBX3P3-201ENST00000508108 LILRA1O75019 489 aa8.61□□□□□ -1.03
CBX3P3-201ENST00000508108 SLC16A10Q8TF71 515 aa8.61□□□□□ -1.03
CBX3P3-201ENST00000508108 ZNF395Q9H8N7 513 aaPredicted RBP8.61□□□□□ -1.03
CBX3P3-201ENST00000508108 SPINT1O43278 529 aa8.6□□□□□ -1.03
CBX3P3-201ENST00000508108 ADH1AP07327 375 aa8.6□□□□□ -1.03
CBX3P3-201ENST00000508108 ADD1P35611 737 aaKnown RBP8.6□□□□□ -1.03
CBX3P3-201ENST00000508108 ABL2P42684 1182 aa8.6□□□□□ -1.03
CBX3P3-201ENST00000508108 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
CBX3P3-201ENST00000508108 ZNF592Q92610 1267 aa8.6□□□□□ -1.03
CBX3P3-201ENST00000508108 GDPD2Q9HCC8 539 aa8.6□□□□□ -1.03
CBX3P3-201ENST00000508108 MCM6Q14566 821 aa8.59□□□□□ -1.03
CBX3P3-201ENST00000508108 LCE2CQ5TA81 110 aa8.59□□□□□ -1.03
CBX3P3-201ENST00000508108 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
CBX3P3-201ENST00000508108 INSM2Q96T92 566 aaPredicted RBP8.59□□□□□ -1.03
CBX3P3-201ENST00000508108 POLMQ9NP87 494 aaPredicted RBP8.59□□□□□ -1.03
CBX3P3-201ENST00000508108 CTSOP43234 321 aaPredicted RBP8.58□□□□□ -1.04
CBX3P3-201ENST00000508108 IRF5Q13568 498 aa8.58□□□□□ -1.04
CBX3P3-201ENST00000508108 H3BM21 787 aa8.57□□□□□ -1.04
CBX3P3-201ENST00000508108 VAC14Q08AM6 782 aa8.57□□□□□ -1.04
CBX3P3-201ENST00000508108 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.57□□□□□ -1.04
CBX3P3-201ENST00000508108 NPAS3Q8IXF0 933 aa8.57□□□□□ -1.04
CBX3P3-201ENST00000508108 TRIM52Q96A61 297 aa8.57□□□□□ -1.04
CBX3P3-201ENST00000508108 PCDHB11Q9Y5F2 797 aa8.57□□□□□ -1.04
CBX3P3-201ENST00000508108 PTGIRP43119 386 aa8.56□□□□□ -1.04
CBX3P3-201ENST00000508108 EIF4G2P78344 907 aaKnown RBP eCLIP8.56□□□□□ -1.04
CBX3P3-201ENST00000508108 CC2D2BQ6DHV5 1058 aa8.55□□□□□ -1.04
CBX3P3-201ENST00000508108 KDF1Q8NAX2 398 aaPredicted RBP8.55□□□□□ -1.04
CBX3P3-201ENST00000508108 IRF7Q92985 503 aa8.55□□□□□ -1.04
CBX3P3-201ENST00000508108 CEP126Q9P2H0 1117 aa8.55□□□□□ -1.04
CBX3P3-201ENST00000508108 ATP5J2-PTCD1G3V325 749 aa8.54□□□□□ -1.04
CBX3P3-201ENST00000508108 SCTRP47872 440 aa8.54□□□□□ -1.04
CBX3P3-201ENST00000508108 ERVK-9P63128 1117 aa8.54□□□□□ -1.04
CBX3P3-201ENST00000508108 CCDC125Q86Z20 511 aa8.54□□□□□ -1.04
CBX3P3-201ENST00000508108 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
CBX3P3-201ENST00000508108 PPFIA3O75145 1194 aa8.53□□□□□ -1.04
CBX3P3-201ENST00000508108 PTSQ03393 145 aa8.53□□□□□ -1.04
CBX3P3-201ENST00000508108 RNF217Q8TC41 542 aa8.53□□□□□ -1.04
CBX3P3-201ENST00000508108 ESF1Q9H501 851 aaKnown RBP8.53□□□□□ -1.04
CBX3P3-201ENST00000508108 GMPRP36959 345 aa8.52□□□□□ -1.05
CBX3P3-201ENST00000508108 FOXD4L5Q5VV16 416 aaPredicted RBP8.52□□□□□ -1.05
CBX3P3-201ENST00000508108 COG6Q9Y2V7 657 aa8.52□□□□□ -1.05
CBX3P3-201ENST00000508108 MEN1O00255 615 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms