RNA–Protein interactions for RNA: ENST00000508070.1

HMGCR-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 3

Gene HMGCR, Length 450 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-206ENST00000508070 PTF1AQ7RTS3 328 aa11.38□□□□□ -0.59
HMGCR-206ENST00000508070 KCNH5Q8NCM2 988 aa11.38□□□□□ -0.59
HMGCR-206ENST00000508070 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
HMGCR-206ENST00000508070 CARD10Q9BWT7 1032 aa11.38□□□□□ -0.59
HMGCR-206ENST00000508070 AXIN2Q9Y2T1 843 aa11.38□□□□□ -0.59
HMGCR-206ENST00000508070 TOPAZ1Q8N9V7 1692 aa11.37□□□□□ -0.59
HMGCR-206ENST00000508070 SLC15A2Q16348 729 aa11.37□□□□□ -0.59
HMGCR-206ENST00000508070 ARHGEF25Q86VW2 580 aa11.37□□□□□ -0.59
HMGCR-206ENST00000508070 SYT17Q9BSW7 474 aa11.37□□□□□ -0.59
HMGCR-206ENST00000508070 PDGFDQ9GZP0 370 aaPredicted RBP11.37□□□□□ -0.59
HMGCR-206ENST00000508070 ATF5Q9Y2D1 282 aaPredicted RBP11.37□□□□□ -0.59
HMGCR-206ENST00000508070 USP6P35125 1406 aa11.36□□□□□ -0.59
HMGCR-206ENST00000508070 ZNF784Q8NCA9 323 aaPredicted RBP11.36□□□□□ -0.59
HMGCR-206ENST00000508070 MTFR1LQ9H019 292 aa11.36□□□□□ -0.59
HMGCR-206ENST00000508070 PEAK1Q9H792 1746 aa11.35□□□□□ -0.59
HMGCR-206ENST00000508070 CSB-PGBD3P0DP91 1061 aa11.35□□□□□ -0.59
HMGCR-206ENST00000508070 KIAA1210Q9ULL0 1709 aa11.35□□□□□ -0.59
HMGCR-206ENST00000508070 RGPD3A6NKT7 1758 aaPredicted RBP11.34□□□□□ -0.59
HMGCR-206ENST00000508070 RGPD4Q7Z3J3 1758 aa11.34□□□□□ -0.59
HMGCR-206ENST00000508070 FHDC1Q9C0D6 1143 aaPredicted RBP11.34□□□□□ -0.59
HMGCR-206ENST00000508070 SLIT3O75094 1523 aa11.34□□□□□ -0.59
HMGCR-206ENST00000508070 TTC21BQ7Z4L5 1316 aa11.34□□□□□ -0.59
HMGCR-206ENST00000508070 EVC2Q86UK5 1308 aa11.34□□□□□ -0.59
HMGCR-206ENST00000508070 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
HMGCR-206ENST00000508070 TTC21AQ8NDW8 1320 aa11.33□□□□□ -0.6
HMGCR-206ENST00000508070 SBF2Q86WG5 1849 aa11.32□□□□□ -0.6
HMGCR-206ENST00000508070 CCDC7Q96M83 1385 aa11.32□□□□□ -0.6
HMGCR-206ENST00000508070 CASZ1Q86V15 1759 aa11.31□□□□□ -0.6
HMGCR-206ENST00000508070 ARXQ96QS3 562 aa11.31□□□□□ -0.6
HMGCR-206ENST00000508070 CPSF1Q10570 1443 aaKnown RBP11.31□□□□□ -0.6
HMGCR-206ENST00000508070 LRRC37A3O60309 1634 aa11.31□□□□□ -0.6
HMGCR-206ENST00000508070 COL18A1P39060 1754 aa11.31□□□□□ -0.6
HMGCR-206ENST00000508070 SOX12O15370 315 aa11.29□□□□□ -0.6
HMGCR-206ENST00000508070 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
HMGCR-206ENST00000508070 SLC16A10Q8TF71 515 aa11.29□□□□□ -0.6
HMGCR-206ENST00000508070 MAP3K5Q99683 1374 aa11.28□□□□□ -0.6
HMGCR-206ENST00000508070 IL2RBP14784 551 aa11.28□□□□□ -0.6
HMGCR-206ENST00000508070 ACSBG1Q96GR2 724 aa11.28□□□□□ -0.6
HMGCR-206ENST00000508070 NLRP2Q9NX02 1062 aa11.28□□□□□ -0.6
HMGCR-206ENST00000508070 SENP3-EIF4A1A0A087X0R7 540 aa11.27□□□□□ -0.61
HMGCR-206ENST00000508070 GPR162Q16538 588 aa11.27□□□□□ -0.61
HMGCR-206ENST00000508070 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
HMGCR-206ENST00000508070 PIK3C2AO00443 1686 aa11.26□□□□□ -0.61
HMGCR-206ENST00000508070 MYOM1P52179 1685 aa11.26□□□□□ -0.61
HMGCR-206ENST00000508070 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
HMGCR-206ENST00000508070 KTN1Q86UP2 1357 aaKnown RBP11.26□□□□□ -0.61
HMGCR-206ENST00000508070 TNS2Q63HR2 1409 aa11.26□□□□□ -0.61
HMGCR-206ENST00000508070 SLC27A3Q5K4L6 730 aa11.25□□□□□ -0.61
HMGCR-206ENST00000508070 ERBB3P21860 1342 aa11.25□□□□□ -0.61
HMGCR-206ENST00000508070 ABCC6O95255 1503 aa11.25□□□□□ -0.61
HMGCR-206ENST00000508070 AKAP12Q02952 1782 aa11.24□□□□□ -0.61
HMGCR-206ENST00000508070 POLD1P28340 1107 aa11.24□□□□□ -0.61
HMGCR-206ENST00000508070 ZNF827Q17R98 1081 aa11.24□□□□□ -0.61
HMGCR-206ENST00000508070 AKT1S1Q96B36 256 aa11.24□□□□□ -0.61
HMGCR-206ENST00000508070 LRRC4BQ9NT99 713 aa11.24□□□□□ -0.61
HMGCR-206ENST00000508070 QRICH2Q9H0J4 1663 aa11.24□□□□□ -0.61
HMGCR-206ENST00000508070 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.23□□□□□ -0.61
HMGCR-206ENST00000508070 ANKRD24Q8TF21 1146 aa11.23□□□□□ -0.61
HMGCR-206ENST00000508070 NFAT5O94916 1531 aa11.23□□□□□ -0.61
HMGCR-206ENST00000508070 TRPM1Q7Z4N2 1603 aa11.23□□□□□ -0.61
HMGCR-206ENST00000508070 CHD4Q14839 1912 aa11.23□□□□□ -0.61
HMGCR-206ENST00000508070 RGPD5Q99666 1765 aa11.22□□□□□ -0.61
HMGCR-206ENST00000508070 WNK3Q9BYP7 1800 aa11.22□□□□□ -0.61
HMGCR-206ENST00000508070 GIGYF1O75420 1035 aaPredicted RBP11.21□□□□□ -0.61
HMGCR-206ENST00000508070 HDGFL2Q7Z4V5 671 aaPredicted RBP11.21□□□□□ -0.61
HMGCR-206ENST00000508070 NME9Q86XW9 330 aa11.21□□□□□ -0.61
HMGCR-206ENST00000508070 DDX54Q8TDD1 881 aaKnown RBP11.21□□□□□ -0.61
HMGCR-206ENST00000508070 TFCP2L1Q9NZI6 479 aa11.21□□□□□ -0.61
HMGCR-206ENST00000508070 NHSQ6T4R5 1651 aa11.2□□□□□ -0.62
HMGCR-206ENST00000508070 ROCK2O75116 1388 aaKnown RBP11.2□□□□□ -0.62
HMGCR-206ENST00000508070 GRIN3BO60391 1043 aa11.2□□□□□ -0.62
HMGCR-206ENST00000508070 IP6K1Q92551 441 aa11.2□□□□□ -0.62
HMGCR-206ENST00000508070 PNPLA7Q6ZV29 1317 aa11.19□□□□□ -0.62
HMGCR-206ENST00000508070 HMGB2P26583 209 aaKnown RBP11.19□□□□□ -0.62
HMGCR-206ENST00000508070 PELP1Q8IZL8 1130 aaKnown RBP11.19□□□□□ -0.62
HMGCR-206ENST00000508070 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
HMGCR-206ENST00000508070 TMC1Q8TDI8 760 aa11.19□□□□□ -0.62
HMGCR-206ENST00000508070 TERF2IPQ9NYB0 399 aa11.19□□□□□ -0.62
HMGCR-206ENST00000508070 KAT6BQ8WYB5 2073 aa11.18□□□□□ -0.62
HMGCR-206ENST00000508070 SBNO2Q9Y2G9 1366 aa11.18□□□□□ -0.62
HMGCR-206ENST00000508070 PAPPAQ13219 1627 aa11.18□□□□□ -0.62
HMGCR-206ENST00000508070 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
HMGCR-206ENST00000508070 IFFO2Q5TF58 517 aa11.18□□□□□ -0.62
HMGCR-206ENST00000508070 PUS7Q96PZ0 661 aaKnown RBP11.18□□□□□ -0.62
HMGCR-206ENST00000508070 SIN3AQ96ST3 1273 aa11.18□□□□□ -0.62
HMGCR-206ENST00000508070 SLC12A5Q9H2X9 1139 aa11.18□□□□□ -0.62
HMGCR-206ENST00000508070 SYTL4Q96C24 671 aaPredicted RBP11.17□□□□□ -0.62
HMGCR-206ENST00000508070 NEUROD1Q13562 356 aa11.16□□□□□ -0.62
HMGCR-206ENST00000508070 NLGN2Q8NFZ4 835 aa11.16□□□□□ -0.62
HMGCR-206ENST00000508070 ZCRB1Q8TBF4 217 aaKnown RBP11.16□□□□□ -0.62
HMGCR-206ENST00000508070 EDC4Q6P2E9 1401 aaKnown RBP11.16□□□□□ -0.62
HMGCR-206ENST00000508070 BTAF1O14981 1849 aa11.16□□□□□ -0.62
HMGCR-206ENST00000508070 ANKRD36BQ8N2N9 1353 aa11.16□□□□□ -0.62
HMGCR-206ENST00000508070 KCNQ4P56696 695 aa11.15□□□□□ -0.62
HMGCR-206ENST00000508070 LTV1Q96GA3 475 aaPredicted RBP11.15□□□□□ -0.62
HMGCR-206ENST00000508070 CD163L1Q9NR16 1453 aa11.14□□□□□ -0.63
HMGCR-206ENST00000508070 CARD11Q9BXL7 1154 aa11.14□□□□□ -0.63
HMGCR-206ENST00000508070 CCNL1Q9UK58 526 aaPredicted RBP11.14□□□□□ -0.63
HMGCR-206ENST00000508070 MSH5O43196 834 aa11.13□□□□□ -0.63
HMGCR-206ENST00000508070 YBX3P16989 372 aaKnown RBP eCLIP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms