RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 IFFO2Q5TF58 517 aa20.38■□□□□ 0.85
DDR1-260ENST00000507533 MTFR1LQ9H019 292 aa20.37■□□□□ 0.85
DDR1-260ENST00000507533 ARHGEF28Q8N1W1 1705 aaKnown RBP20.36■□□□□ 0.85
DDR1-260ENST00000507533 AATKQ6ZMQ8 1374 aa20.36■□□□□ 0.85
DDR1-260ENST00000507533 TOPAZ1Q8N9V7 1692 aa20.35■□□□□ 0.85
DDR1-260ENST00000507533 LRRC37A3O60309 1634 aa20.35■□□□□ 0.85
DDR1-260ENST00000507533 SBF2Q86WG5 1849 aa20.35■□□□□ 0.85
DDR1-260ENST00000507533 NLRP6P59044 892 aa20.34■□□□□ 0.85
DDR1-260ENST00000507533 SGIP1Q9BQI5 828 aa20.34■□□□□ 0.85
DDR1-260ENST00000507533 CDCA7Q9BWT1 371 aaPredicted RBP20.34■□□□□ 0.85
DDR1-260ENST00000507533 BCL9O00512 1426 aa20.34■□□□□ 0.85
DDR1-260ENST00000507533 SRPK2P78362 688 aaKnown RBP20.32■□□□□ 0.84
DDR1-260ENST00000507533 ARXQ96QS3 562 aa20.32■□□□□ 0.84
DDR1-260ENST00000507533 WDR17Q8IZU2 1322 aa20.31■□□□□ 0.84
DDR1-260ENST00000507533 PPIP5K1Q6PFW1 1433 aa20.31■□□□□ 0.84
DDR1-260ENST00000507533 AXIN2Q9Y2T1 843 aa20.31■□□□□ 0.84
DDR1-260ENST00000507533 BRD4O60885 1362 aaPredicted RBP20.31■□□□□ 0.84
DDR1-260ENST00000507533 EXOC5O00471 708 aa20.29■□□□□ 0.84
DDR1-260ENST00000507533 GPR162Q16538 588 aa20.29■□□□□ 0.84
DDR1-260ENST00000507533 GIGYF1O75420 1035 aaPredicted RBP20.28■□□□□ 0.84
DDR1-260ENST00000507533 CABP2Q9NPB3 220 aa20.28■□□□□ 0.84
DDR1-260ENST00000507533 CARD10Q9BWT7 1032 aa20.27■□□□□ 0.84
DDR1-260ENST00000507533 CHD4Q14839 1912 aa20.26■□□□□ 0.83
DDR1-260ENST00000507533 MAP3K5Q99683 1374 aa20.26■□□□□ 0.83
DDR1-260ENST00000507533 CSB-PGBD3P0DP91 1061 aa20.26■□□□□ 0.83
DDR1-260ENST00000507533 SLIT3O75094 1523 aa20.26■□□□□ 0.83
DDR1-260ENST00000507533 RAB3GAP2Q9H2M9 1393 aa20.25■□□□□ 0.83
DDR1-260ENST00000507533 CABP1Q9NZU7 370 aa20.25■□□□□ 0.83
DDR1-260ENST00000507533 USP6P35125 1406 aa20.24■□□□□ 0.83
DDR1-260ENST00000507533 ARHGEF25Q86VW2 580 aa20.23■□□□□ 0.83
DDR1-260ENST00000507533 CPSF1Q10570 1443 aaKnown RBP20.22■□□□□ 0.83
DDR1-260ENST00000507533 COL18A1P39060 1754 aa20.22■□□□□ 0.83
DDR1-260ENST00000507533 ACSBG1Q96GR2 724 aa20.22■□□□□ 0.83
DDR1-260ENST00000507533 AKAP12Q02952 1782 aa20.21■□□□□ 0.83
DDR1-260ENST00000507533 NBPF1Q3BBV0 1214 aa20.21■□□□□ 0.83
DDR1-260ENST00000507533 WNK3Q9BYP7 1800 aa20.2■□□□□ 0.82
DDR1-260ENST00000507533 SOX12O15370 315 aa20.2■□□□□ 0.82
DDR1-260ENST00000507533 PELP1Q8IZL8 1130 aaKnown RBP20.2■□□□□ 0.82
DDR1-260ENST00000507533 KLHL34Q8N239 644 aa20.2■□□□□ 0.82
DDR1-260ENST00000507533 KCNH5Q8NCM2 988 aa20.2■□□□□ 0.82
DDR1-260ENST00000507533 CENPJQ9HC77 1338 aaPredicted RBP20.2■□□□□ 0.82
DDR1-260ENST00000507533 ZNF827Q17R98 1081 aa20.19■□□□□ 0.82
DDR1-260ENST00000507533 CCDC7Q96M83 1385 aa20.19■□□□□ 0.82
DDR1-260ENST00000507533 CEP350Q5VT06 3117 aa20.18■□□□□ 0.82
DDR1-260ENST00000507533 TNS2Q63HR2 1409 aa20.17■□□□□ 0.82
DDR1-260ENST00000507533 POLD1P28340 1107 aa20.16■□□□□ 0.82
DDR1-260ENST00000507533 SLC16A10Q8TF71 515 aa20.15■□□□□ 0.82
DDR1-260ENST00000507533 LRRC4BQ9NT99 713 aa20.15■□□□□ 0.82
DDR1-260ENST00000507533 PIK3C2AO00443 1686 aa20.15■□□□□ 0.82
DDR1-260ENST00000507533 PAPPAQ13219 1627 aa20.14■□□□□ 0.81
DDR1-260ENST00000507533 TTC21BQ7Z4L5 1316 aa20.14■□□□□ 0.81
DDR1-260ENST00000507533 NHSQ6T4R5 1651 aa20.13■□□□□ 0.81
DDR1-260ENST00000507533 AKT1S1Q96B36 256 aa20.12■□□□□ 0.81
DDR1-260ENST00000507533 ZNF692Q9BU19 519 aaPredicted RBP20.12■□□□□ 0.81
DDR1-260ENST00000507533 KIAA1210Q9ULL0 1709 aa20.12■□□□□ 0.81
DDR1-260ENST00000507533 NLGN2Q8NFZ4 835 aa20.11■□□□□ 0.81
DDR1-260ENST00000507533 TRPM1Q7Z4N2 1603 aa20.1■□□□□ 0.81
DDR1-260ENST00000507533 NLRP2Q9NX02 1062 aa20.1■□□□□ 0.81
DDR1-260ENST00000507533 GOLGB1Q14789 3259 aaKnown RBP20.1■□□□□ 0.81
DDR1-260ENST00000507533 TTC21AQ8NDW8 1320 aa20.09■□□□□ 0.81
DDR1-260ENST00000507533 RGPD5Q99666 1765 aa20.09■□□□□ 0.81
DDR1-260ENST00000507533 IL2RBP14784 551 aa20.09■□□□□ 0.81
DDR1-260ENST00000507533 PNPLA7Q6ZV29 1317 aa20.08■□□□□ 0.81
DDR1-260ENST00000507533 EVC2Q86UK5 1308 aa20.08■□□□□ 0.81
DDR1-260ENST00000507533 ABCC6O95255 1503 aa20.08■□□□□ 0.81
DDR1-260ENST00000507533 SHANK3Q9BYB0 1731 aa20.08■□□□□ 0.81
DDR1-260ENST00000507533 QRICH2Q9H0J4 1663 aa20.08■□□□□ 0.81
DDR1-260ENST00000507533 GRIN3BO60391 1043 aa20.08■□□□□ 0.81
DDR1-260ENST00000507533 SLC27A3Q5K4L6 730 aa20.07■□□□□ 0.8
DDR1-260ENST00000507533 TFCP2L1Q9NZI6 479 aa20.07■□□□□ 0.8
DDR1-260ENST00000507533 NFAT5O94916 1531 aa20.07■□□□□ 0.8
DDR1-260ENST00000507533 YBX3P16989 372 aaKnown RBP eCLIP20.06■□□□□ 0.8
DDR1-260ENST00000507533 ERBB3P21860 1342 aa20.05■□□□□ 0.8
DDR1-260ENST00000507533 BTAF1O14981 1849 aa20.04■□□□□ 0.8
DDR1-260ENST00000507533 KCNQ4P56696 695 aa20.02■□□□□ 0.8
DDR1-260ENST00000507533 ANKRD24Q8TF21 1146 aa20.02■□□□□ 0.8
DDR1-260ENST00000507533 ATP10DQ9P241 1426 aa20.02■□□□□ 0.79
DDR1-260ENST00000507533 KTN1Q86UP2 1357 aaKnown RBP20.01■□□□□ 0.79
DDR1-260ENST00000507533 DDX54Q8TDD1 881 aaKnown RBP20.01■□□□□ 0.79
DDR1-260ENST00000507533 HSPA6P17066 643 aa19.99■□□□□ 0.79
DDR1-260ENST00000507533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.99■□□□□ 0.79
DDR1-260ENST00000507533 GPBP1L1Q9HC44 474 aaPredicted RBP19.99■□□□□ 0.79
DDR1-260ENST00000507533 COL24A1Q17RW2 1714 aa19.99■□□□□ 0.79
DDR1-260ENST00000507533 MSH5O43196 834 aa19.98■□□□□ 0.79
DDR1-260ENST00000507533 SYTL4Q96C24 671 aaPredicted RBP19.98■□□□□ 0.79
DDR1-260ENST00000507533 QSER1Q2KHR3 1735 aa19.98■□□□□ 0.79
DDR1-260ENST00000507533 USP31Q70CQ4 1352 aa19.96■□□□□ 0.79
DDR1-260ENST00000507533 PRIM1P49642 420 aaKnown RBP19.96■□□□□ 0.79
DDR1-260ENST00000507533 NME9Q86XW9 330 aa19.95■□□□□ 0.78
DDR1-260ENST00000507533 COL23A1Q86Y22 540 aaPredicted RBP19.94■□□□□ 0.78
DDR1-260ENST00000507533 ZNF526Q8TF50 670 aaPredicted RBP19.94■□□□□ 0.78
DDR1-260ENST00000507533 KAT6BQ8WYB5 2073 aa19.93■□□□□ 0.78
DDR1-260ENST00000507533 MSL1Q68DK7 614 aa19.93■□□□□ 0.78
DDR1-260ENST00000507533 CCNL1Q9UK58 526 aaPredicted RBP19.93■□□□□ 0.78
DDR1-260ENST00000507533 ANKRD36BQ8N2N9 1353 aa19.92■□□□□ 0.78
DDR1-260ENST00000507533 CD2APQ9Y5K6 639 aa19.91■□□□□ 0.78
DDR1-260ENST00000507533 TUBGCP6Q96RT7 1819 aa19.9■□□□□ 0.78
DDR1-260ENST00000507533 LTV1Q96GA3 475 aaPredicted RBP19.9■□□□□ 0.78
DDR1-260ENST00000507533 ADCY9O60503 1353 aa19.89■□□□□ 0.77
DDR1-260ENST00000507533 NSD2O96028 1365 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms