RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 CHD4Q14839 1912 aa13.29□□□□□ -0.28
COPS4-205ENST00000507376 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
COPS4-205ENST00000507376 PTGER2P43116 358 aa13.29□□□□□ -0.28
COPS4-205ENST00000507376 FKBP8Q14318 412 aa13.29□□□□□ -0.28
COPS4-205ENST00000507376 NBPF8Q3BBV2 869 aa13.29□□□□□ -0.28
COPS4-205ENST00000507376 NBPF14Q5TI25 921 aa13.29□□□□□ -0.28
COPS4-205ENST00000507376 TCP11L2Q8N4U5 519 aa13.29□□□□□ -0.28
COPS4-205ENST00000507376 USP19O94966 1318 aa13.29□□□□□ -0.28
COPS4-205ENST00000507376 ZBTB7CA1YPR0 619 aa13.28□□□□□ -0.28
COPS4-205ENST00000507376 PROM2Q8N271 834 aa13.28□□□□□ -0.28
COPS4-205ENST00000507376 NUDT16Q96DE0 195 aaKnown RBP13.28□□□□□ -0.28
COPS4-205ENST00000507376 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
COPS4-205ENST00000507376 POLR3AO14802 1390 aaPredicted RBP13.28□□□□□ -0.28
COPS4-205ENST00000507376 EIF3AQ14152 1382 aaKnown RBP13.28□□□□□ -0.28
COPS4-205ENST00000507376 PAPPAQ13219 1627 aa13.28□□□□□ -0.28
COPS4-205ENST00000507376 PIK3C2AO00443 1686 aa13.28□□□□□ -0.28
COPS4-205ENST00000507376 KDM2AQ9Y2K7 1162 aa13.27□□□□□ -0.29
COPS4-205ENST00000507376 ACEP12821 1306 aa13.27□□□□□ -0.29
COPS4-205ENST00000507376 CPDO75976 1380 aa13.27□□□□□ -0.29
COPS4-205ENST00000507376 EVA1CP58658 441 aa13.26□□□□□ -0.29
COPS4-205ENST00000507376 SLIT3O75094 1523 aa13.25□□□□□ -0.29
COPS4-205ENST00000507376 CRB1P82279 1406 aa13.25□□□□□ -0.29
COPS4-205ENST00000507376 FHDC1Q9C0D6 1143 aaPredicted RBP13.25□□□□□ -0.29
COPS4-205ENST00000507376 TUBGCP6Q96RT7 1819 aa13.23□□□□□ -0.29
COPS4-205ENST00000507376 SHANK3Q9BYB0 1731 aa13.23□□□□□ -0.29
COPS4-205ENST00000507376 MARCH10Q8NA82 808 aaPredicted RBP13.23□□□□□ -0.29
COPS4-205ENST00000507376 CDK19Q9BWU1 502 aa13.23□□□□□ -0.29
COPS4-205ENST00000507376 NHSQ6T4R5 1651 aa13.22□□□□□ -0.29
COPS4-205ENST00000507376 ABTB2Q8N961 1025 aa13.22□□□□□ -0.29
COPS4-205ENST00000507376 SGIP1Q9BQI5 828 aa13.22□□□□□ -0.29
COPS4-205ENST00000507376 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
COPS4-205ENST00000507376 QRICH2Q9H0J4 1663 aa13.21□□□□□ -0.29
COPS4-205ENST00000507376 DCAF11Q8TEB1 546 aa13.21□□□□□ -0.29
COPS4-205ENST00000507376 SYT17Q9BSW7 474 aa13.21□□□□□ -0.29
COPS4-205ENST00000507376 PPIP5K1Q6PFW1 1433 aa13.21□□□□□ -0.3
COPS4-205ENST00000507376 GCP02774 474 aa13.2□□□□□ -0.3
COPS4-205ENST00000507376 C1QTNF8P60827 252 aa13.2□□□□□ -0.3
COPS4-205ENST00000507376 BTAF1O14981 1849 aa13.2□□□□□ -0.3
COPS4-205ENST00000507376 AXIN2Q9Y2T1 843 aa13.19□□□□□ -0.3
COPS4-205ENST00000507376 RAB3GAP2Q9H2M9 1393 aa13.19□□□□□ -0.3
COPS4-205ENST00000507376 PLSCR1O15162 318 aa13.18□□□□□ -0.3
COPS4-205ENST00000507376 DDB1Q16531 1140 aa13.18□□□□□ -0.3
COPS4-205ENST00000507376 TXNRD1Q16881 649 aa13.18□□□□□ -0.3
COPS4-205ENST00000507376 USP6P35125 1406 aa13.17□□□□□ -0.3
COPS4-205ENST00000507376 CPSF1Q10570 1443 aaKnown RBP13.17□□□□□ -0.3
COPS4-205ENST00000507376 CEP350Q5VT06 3117 aa13.17□□□□□ -0.3
COPS4-205ENST00000507376 ZNF827Q17R98 1081 aa13.17□□□□□ -0.3
COPS4-205ENST00000507376 THRAP3Q9Y2W1 955 aaKnown RBP13.17□□□□□ -0.3
COPS4-205ENST00000507376 GOLGB1Q14789 3259 aaKnown RBP13.17□□□□□ -0.3
COPS4-205ENST00000507376 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
COPS4-205ENST00000507376 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
COPS4-205ENST00000507376 SOX12O15370 315 aa13.16□□□□□ -0.3
COPS4-205ENST00000507376 POTEHQ6S545 545 aa13.16□□□□□ -0.3
COPS4-205ENST00000507376 TOM1L2Q6ZVM7 507 aa13.16□□□□□ -0.3
COPS4-205ENST00000507376 CABP2Q9NPB3 220 aa13.16□□□□□ -0.3
COPS4-205ENST00000507376 NFAT5O94916 1531 aa13.16□□□□□ -0.3
COPS4-205ENST00000507376 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
COPS4-205ENST00000507376 TNS2Q63HR2 1409 aa13.15□□□□□ -0.3
COPS4-205ENST00000507376 POLA2Q14181 598 aa13.15□□□□□ -0.3
COPS4-205ENST00000507376 SLC15A2Q16348 729 aa13.15□□□□□ -0.3
COPS4-205ENST00000507376 STK32BQ9NY57 414 aa13.15□□□□□ -0.3
COPS4-205ENST00000507376 KIAA1210Q9ULL0 1709 aa13.14□□□□□ -0.31
COPS4-205ENST00000507376 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
COPS4-205ENST00000507376 ACSBG1Q96GR2 724 aa13.14□□□□□ -0.31
COPS4-205ENST00000507376 CCDC61Q9Y6R9 512 aa13.14□□□□□ -0.31
COPS4-205ENST00000507376 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
COPS4-205ENST00000507376 BCL9O00512 1426 aa13.13□□□□□ -0.31
COPS4-205ENST00000507376 ABCC6O95255 1503 aa13.13□□□□□ -0.31
COPS4-205ENST00000507376 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
COPS4-205ENST00000507376 IFFO2Q5TF58 517 aa13.13□□□□□ -0.31
COPS4-205ENST00000507376 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
COPS4-205ENST00000507376 MTFR1LQ9H019 292 aa13.13□□□□□ -0.31
COPS4-205ENST00000507376 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
COPS4-205ENST00000507376 NLRP6P59044 892 aa13.11□□□□□ -0.31
COPS4-205ENST00000507376 SRPK2P78362 688 aaKnown RBP13.11□□□□□ -0.31
COPS4-205ENST00000507376 NLGN2Q8NFZ4 835 aa13.11□□□□□ -0.31
COPS4-205ENST00000507376 ARXQ96QS3 562 aa13.11□□□□□ -0.31
COPS4-205ENST00000507376 LTN1O94822 1766 aa13.11□□□□□ -0.31
COPS4-205ENST00000507376 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
COPS4-205ENST00000507376 KCNQ4P56696 695 aa13.1□□□□□ -0.31
COPS4-205ENST00000507376 PELP1Q8IZL8 1130 aaKnown RBP13.1□□□□□ -0.31
COPS4-205ENST00000507376 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
COPS4-205ENST00000507376 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
COPS4-205ENST00000507376 MAP3K5Q99683 1374 aa13.09□□□□□ -0.31
COPS4-205ENST00000507376 DOT1LQ8TEK3 1739 aa13.09□□□□□ -0.31
COPS4-205ENST00000507376 GIGYF1O75420 1035 aaPredicted RBP13.08□□□□□ -0.32
COPS4-205ENST00000507376 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
COPS4-205ENST00000507376 MON2Q7Z3U7 1717 aa13.08□□□□□ -0.32
COPS4-205ENST00000507376 GPR162Q16538 588 aa13.07□□□□□ -0.32
COPS4-205ENST00000507376 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
COPS4-205ENST00000507376 YBX3P16989 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
COPS4-205ENST00000507376 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
COPS4-205ENST00000507376 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
COPS4-205ENST00000507376 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
COPS4-205ENST00000507376 BRD4O60885 1362 aaPredicted RBP13.05□□□□□ -0.32
COPS4-205ENST00000507376 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
COPS4-205ENST00000507376 CARD10Q9BWT7 1032 aa13.04□□□□□ -0.32
COPS4-205ENST00000507376 USP54Q70EL1 1684 aa13.04□□□□□ -0.32
COPS4-205ENST00000507376 LY75O60449 1722 aa13.04□□□□□ -0.32
COPS4-205ENST00000507376 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms