RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 CABP2Q9NPB3 220 aa23.93■■□□□ 1.42
SNF8-205ENST00000507302 WDR17Q8IZU2 1322 aa23.92■■□□□ 1.42
SNF8-205ENST00000507302 PTF1AQ7RTS3 328 aa23.92■■□□□ 1.42
SNF8-205ENST00000507302 PPP1R1BQ9UD71 204 aaPredicted RBP23.92■■□□□ 1.42
SNF8-205ENST00000507302 RGPD5Q99666 1765 aa23.91■■□□□ 1.42
SNF8-205ENST00000507302 NLRP6P59044 892 aa23.91■■□□□ 1.42
SNF8-205ENST00000507302 CABP1Q9NZU7 370 aa23.91■■□□□ 1.42
SNF8-205ENST00000507302 AXIN2Q9Y2T1 843 aa23.91■■□□□ 1.42
SNF8-205ENST00000507302 MARCH10Q8NA82 808 aaPredicted RBP23.9■■□□□ 1.42
SNF8-205ENST00000507302 CDCA7Q9BWT1 371 aaPredicted RBP23.9■■□□□ 1.42
SNF8-205ENST00000507302 CPSF1Q10570 1443 aaKnown RBP23.9■■□□□ 1.42
SNF8-205ENST00000507302 MYOM1P52179 1685 aa23.89■■□□□ 1.41
SNF8-205ENST00000507302 ARHGEF25Q86VW2 580 aa23.88■■□□□ 1.41
SNF8-205ENST00000507302 ABCC6O95255 1503 aa23.88■■□□□ 1.41
SNF8-205ENST00000507302 PTGER2P43116 358 aa23.87■■□□□ 1.41
SNF8-205ENST00000507302 TOM1L2Q6ZVM7 507 aa23.87■■□□□ 1.41
SNF8-205ENST00000507302 PDGFDQ9GZP0 370 aaPredicted RBP23.87■■□□□ 1.41
SNF8-205ENST00000507302 TRPM1Q7Z4N2 1603 aa23.87■■□□□ 1.41
SNF8-205ENST00000507302 UTRNP46939 3433 aa23.86■■□□□ 1.41
SNF8-205ENST00000507302 NFAT5O94916 1531 aa23.85■■□□□ 1.41
SNF8-205ENST00000507302 CARD10Q9BWT7 1032 aa23.85■■□□□ 1.41
SNF8-205ENST00000507302 DCAF8L1A6NGE4 600 aa23.84■■□□□ 1.41
SNF8-205ENST00000507302 USP54Q70EL1 1684 aa23.83■■□□□ 1.4
SNF8-205ENST00000507302 NHSQ6T4R5 1651 aa23.82■■□□□ 1.4
SNF8-205ENST00000507302 KCNH5Q8NCM2 988 aa23.81■■□□□ 1.4
SNF8-205ENST00000507302 ZNF692Q9BU19 519 aaPredicted RBP23.81■■□□□ 1.4
SNF8-205ENST00000507302 TTC21BQ7Z4L5 1316 aa23.81■■□□□ 1.4
SNF8-205ENST00000507302 PAPPAQ13219 1627 aa23.81■■□□□ 1.4
SNF8-205ENST00000507302 TXNRD1Q16881 649 aa23.8■■□□□ 1.4
SNF8-205ENST00000507302 SGIP1Q9BQI5 828 aa23.8■■□□□ 1.4
SNF8-205ENST00000507302 TNS2Q63HR2 1409 aa23.79■■□□□ 1.4
SNF8-205ENST00000507302 ZBTB7CA1YPR0 619 aa23.79■■□□□ 1.4
SNF8-205ENST00000507302 SLC15A2Q16348 729 aa23.79■■□□□ 1.4
SNF8-205ENST00000507302 EVC2Q86UK5 1308 aa23.79■■□□□ 1.4
SNF8-205ENST00000507302 TTC21AQ8NDW8 1320 aa23.79■■□□□ 1.4
SNF8-205ENST00000507302 CCDC7Q96M83 1385 aa23.78■■□□□ 1.4
SNF8-205ENST00000507302 CHD4Q14839 1912 aa23.77■■□□□ 1.4
SNF8-205ENST00000507302 MON2Q7Z3U7 1717 aa23.77■■□□□ 1.4
SNF8-205ENST00000507302 ZBTB7AO95365 584 aa23.77■■□□□ 1.4
SNF8-205ENST00000507302 EXOC5O00471 708 aa23.75■■□□□ 1.39
SNF8-205ENST00000507302 STK32BQ9NY57 414 aa23.75■■□□□ 1.39
SNF8-205ENST00000507302 SYT17Q9BSW7 474 aa23.74■■□□□ 1.39
SNF8-205ENST00000507302 ZNF784Q8NCA9 323 aaPredicted RBP23.73■■□□□ 1.39
SNF8-205ENST00000507302 MTFR1LQ9H019 292 aa23.73■■□□□ 1.39
SNF8-205ENST00000507302 MAP3K5Q99683 1374 aa23.73■■□□□ 1.39
SNF8-205ENST00000507302 ATF5Q9Y2D1 282 aaPredicted RBP23.72■■□□□ 1.39
SNF8-205ENST00000507302 USP31Q70CQ4 1352 aa23.72■■□□□ 1.39
SNF8-205ENST00000507302 COL24A1Q17RW2 1714 aa23.72■■□□□ 1.39
SNF8-205ENST00000507302 BTAF1O14981 1849 aa23.71■■□□□ 1.39
SNF8-205ENST00000507302 L3MBTL2Q969R5 705 aa23.71■■□□□ 1.39
SNF8-205ENST00000507302 FHDC1Q9C0D6 1143 aaPredicted RBP23.71■■□□□ 1.39
SNF8-205ENST00000507302 QSER1Q2KHR3 1735 aa23.7■■□□□ 1.38
SNF8-205ENST00000507302 LTN1O94822 1766 aa23.69■■□□□ 1.38
SNF8-205ENST00000507302 ERBB3P21860 1342 aa23.68■■□□□ 1.38
SNF8-205ENST00000507302 CSB-PGBD3P0DP91 1061 aa23.68■■□□□ 1.38
SNF8-205ENST00000507302 KTN1Q86UP2 1357 aaKnown RBP23.67■■□□□ 1.38
SNF8-205ENST00000507302 CD163L1Q9NR16 1453 aa23.67■■□□□ 1.38
SNF8-205ENST00000507302 SBNO2Q9Y2G9 1366 aa23.66■■□□□ 1.38
SNF8-205ENST00000507302 SOX12O15370 315 aa23.63■■□□□ 1.37
SNF8-205ENST00000507302 ARXQ96QS3 562 aa23.62■■□□□ 1.37
SNF8-205ENST00000507302 ROCK2O75116 1388 aaKnown RBP23.62■■□□□ 1.37
SNF8-205ENST00000507302 IL2RBP14784 551 aa23.61■■□□□ 1.37
SNF8-205ENST00000507302 LRRC4BQ9NT99 713 aa23.6■■□□□ 1.37
SNF8-205ENST00000507302 ZNF827Q17R98 1081 aa23.59■■□□□ 1.37
SNF8-205ENST00000507302 ACSBG1Q96GR2 724 aa23.59■■□□□ 1.37
SNF8-205ENST00000507302 FAM208AQ9UK61 1670 aaKnown RBP23.59■■□□□ 1.37
SNF8-205ENST00000507302 AKT1S1Q96B36 256 aa23.58■■□□□ 1.37
SNF8-205ENST00000507302 TUBGCP6Q96RT7 1819 aa23.57■■□□□ 1.36
SNF8-205ENST00000507302 SLC16A10Q8TF71 515 aa23.56■■□□□ 1.36
SNF8-205ENST00000507302 NLRP2Q9NX02 1062 aa23.56■■□□□ 1.36
SNF8-205ENST00000507302 NME9Q86XW9 330 aa23.55■■□□□ 1.36
SNF8-205ENST00000507302 LY75O60449 1722 aa23.55■■□□□ 1.36
SNF8-205ENST00000507302 GOLGB1Q14789 3259 aaKnown RBP23.55■■□□□ 1.36
SNF8-205ENST00000507302 EDC4Q6P2E9 1401 aaKnown RBP23.54■■□□□ 1.36
SNF8-205ENST00000507302 C1QTNF8P60827 252 aa23.54■■□□□ 1.36
SNF8-205ENST00000507302 ANKRD24Q8TF21 1146 aa23.54■■□□□ 1.36
SNF8-205ENST00000507302 KAT6BQ8WYB5 2073 aa23.53■■□□□ 1.36
SNF8-205ENST00000507302 SLC27A3Q5K4L6 730 aa23.53■■□□□ 1.36
SNF8-205ENST00000507302 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.53■■□□□ 1.36
SNF8-205ENST00000507302 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
SNF8-205ENST00000507302 SHANK3Q9BYB0 1731 aa23.52■■□□□ 1.36
SNF8-205ENST00000507302 PNPLA7Q6ZV29 1317 aa23.5■■□□□ 1.35
SNF8-205ENST00000507302 PUS7Q96PZ0 661 aaKnown RBP23.49■■□□□ 1.35
SNF8-205ENST00000507302 IP6K1Q92551 441 aa23.48■■□□□ 1.35
SNF8-205ENST00000507302 NSD2O96028 1365 aa23.48■■□□□ 1.35
SNF8-205ENST00000507302 DOT1LQ8TEK3 1739 aa23.47■■□□□ 1.35
SNF8-205ENST00000507302 A0A1W2PP64 1363 aa23.47■■□□□ 1.35
SNF8-205ENST00000507302 ANKRD36BQ8N2N9 1353 aa23.46■■□□□ 1.35
SNF8-205ENST00000507302 SLC12A5Q9H2X9 1139 aa23.46■■□□□ 1.35
SNF8-205ENST00000507302 HDGFL2Q7Z4V5 671 aaPredicted RBP23.45■■□□□ 1.34
SNF8-205ENST00000507302 SENP3-EIF4A1A0A087X0R7 540 aa23.44■■□□□ 1.34
SNF8-205ENST00000507302 RGPD2P0DJD1 1756 aa23.43■■□□□ 1.34
SNF8-205ENST00000507302 GPR162Q16538 588 aa23.43■■□□□ 1.34
SNF8-205ENST00000507302 POLD1P28340 1107 aa23.42■■□□□ 1.34
SNF8-205ENST00000507302 TERF2IPQ9NYB0 399 aa23.42■■□□□ 1.34
SNF8-205ENST00000507302 DDX54Q8TDD1 881 aaKnown RBP23.4■■□□□ 1.34
SNF8-205ENST00000507302 TMC1Q8TDI8 760 aa23.4■■□□□ 1.34
SNF8-205ENST00000507302 CEP350Q5VT06 3117 aa23.39■■□□□ 1.34
SNF8-205ENST00000507302 PRIM1P49642 420 aaKnown RBP23.39■■□□□ 1.33
SNF8-205ENST00000507302 NEUROD1Q13562 356 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms