RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
RNF4-208ENST00000507247 LRP6O75581 1613 aa19.11■□□□□ 0.65
RNF4-208ENST00000507247 ABCC6O95255 1503 aa19.1■□□□□ 0.65
RNF4-208ENST00000507247 INSRP06213 1382 aa19.1■□□□□ 0.65
RNF4-208ENST00000507247 NUTM2BA6NNL0 878 aaPredicted RBP19.1■□□□□ 0.65
RNF4-208ENST00000507247 NUTM2EB1AL46 878 aaPredicted RBP19.1■□□□□ 0.65
RNF4-208ENST00000507247 HOXC9P31274 260 aa19.1■□□□□ 0.65
RNF4-208ENST00000507247 AMPHP49418 695 aa19.1■□□□□ 0.65
RNF4-208ENST00000507247 NUTM2AQ8IVF1 878 aaPredicted RBP19.1■□□□□ 0.65
RNF4-208ENST00000507247 MRS2Q9HD23 443 aa19.1■□□□□ 0.65
RNF4-208ENST00000507247 COL14A1Q05707 1796 aaKnown RBP19.1■□□□□ 0.65
RNF4-208ENST00000507247 SPATA31A6Q5VVP1 1343 aa19.09■□□□□ 0.65
RNF4-208ENST00000507247 CHRNA2Q15822 529 aa19.09■□□□□ 0.65
RNF4-208ENST00000507247 IP6K1Q92551 441 aa19.09■□□□□ 0.65
RNF4-208ENST00000507247 PLCH1Q4KWH8 1693 aa19.08■□□□□ 0.65
RNF4-208ENST00000507247 HSP90AB2PQ58FF8 381 aa19.08■□□□□ 0.64
RNF4-208ENST00000507247 PRDM11Q9NQV5 511 aa19.08■□□□□ 0.64
RNF4-208ENST00000507247 RGPD2P0DJD1 1756 aa19.07■□□□□ 0.64
RNF4-208ENST00000507247 CFAP53Q96M91 514 aa19.07■□□□□ 0.64
RNF4-208ENST00000507247 AXIN2Q9Y2T1 843 aa19.07■□□□□ 0.64
RNF4-208ENST00000507247 CAMTA1Q9Y6Y1 1673 aa19.07■□□□□ 0.64
RNF4-208ENST00000507247 FAM83GA6ND36 823 aa19.06■□□□□ 0.64
RNF4-208ENST00000507247 ADAMTS2O95450 1211 aa19.06■□□□□ 0.64
RNF4-208ENST00000507247 BLMP54132 1417 aaPredicted RBP19.06■□□□□ 0.64
RNF4-208ENST00000507247 RGPD1P0DJD0 1748 aa19.05■□□□□ 0.64
RNF4-208ENST00000507247 EIF4A2Q14240 407 aaKnown RBP19.04■□□□□ 0.64
RNF4-208ENST00000507247 NRAPQ86VF7 1730 aa19.04■□□□□ 0.64
RNF4-208ENST00000507247 DIAPH1O60610 1272 aaKnown RBP19.03■□□□□ 0.64
RNF4-208ENST00000507247 IL13P35225 146 aa19.03■□□□□ 0.64
RNF4-208ENST00000507247 NWD2Q9ULI1 1742 aa19.03■□□□□ 0.64
RNF4-208ENST00000507247 COL5A2P05997 1499 aaPredicted RBP19.02■□□□□ 0.63
RNF4-208ENST00000507247 FAM208AQ9UK61 1670 aaKnown RBP19.01■□□□□ 0.63
RNF4-208ENST00000507247 PNISRQ8TF01 805 aaKnown RBP19.01■□□□□ 0.63
RNF4-208ENST00000507247 LTV1Q96GA3 475 aaPredicted RBP19.01■□□□□ 0.63
RNF4-208ENST00000507247 ANKRD24Q8TF21 1146 aa19■□□□□ 0.63
RNF4-208ENST00000507247 SLIT2O94813 1529 aa19■□□□□ 0.63
RNF4-208ENST00000507247 ERBB3P21860 1342 aa19■□□□□ 0.63
RNF4-208ENST00000507247 BTG4Q9NY30 223 aa18.98■□□□□ 0.63
RNF4-208ENST00000507247 U2SURPO15042 1029 aaKnown RBP18.97■□□□□ 0.63
RNF4-208ENST00000507247 MEX3CQ5U5Q3 659 aaKnown RBP18.97■□□□□ 0.63
RNF4-208ENST00000507247 FAM9BQ8IZU0 186 aa18.97■□□□□ 0.63
RNF4-208ENST00000507247 C8orf37Q96NL8 207 aa18.97■□□□□ 0.63
RNF4-208ENST00000507247 NUDCQ9Y266 331 aa18.97■□□□□ 0.63
RNF4-208ENST00000507247 WDR43Q15061 677 aaKnown RBP eCLIP18.96■□□□□ 0.63
RNF4-208ENST00000507247 EYA1Q99502 592 aa18.96■□□□□ 0.63
RNF4-208ENST00000507247 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.96■□□□□ 0.63
RNF4-208ENST00000507247 IGSF1Q8N6C5 1336 aa18.96■□□□□ 0.63
RNF4-208ENST00000507247 STRN4Q9NRL3 753 aa18.95■□□□□ 0.62
RNF4-208ENST00000507247 ADAMTS8Q9UP79 889 aa18.95■□□□□ 0.62
RNF4-208ENST00000507247 WDR17Q8IZU2 1322 aa18.95■□□□□ 0.62
RNF4-208ENST00000507247 NCAPD2Q15021 1401 aa18.94■□□□□ 0.62
RNF4-208ENST00000507247 U2AF1L5P0DN76 240 aaPredicted RBP18.94■□□□□ 0.62
RNF4-208ENST00000507247 U2AF1Q01081 240 aaKnown RBP eCLIP18.94■□□□□ 0.62
RNF4-208ENST00000507247 NBPF6Q5VWK0 638 aa18.94■□□□□ 0.62
RNF4-208ENST00000507247 NBPF4Q96M43 638 aa18.94■□□□□ 0.62
RNF4-208ENST00000507247 BCL9LQ86UU0 1499 aa18.93■□□□□ 0.62
RNF4-208ENST00000507247 CSB-PGBD3P0DP91 1061 aa18.93■□□□□ 0.62
RNF4-208ENST00000507247 AEBP1Q8IUX7 1158 aa18.93■□□□□ 0.62
RNF4-208ENST00000507247 USHBP1Q8N6Y0 703 aa18.93■□□□□ 0.62
RNF4-208ENST00000507247 NGLY1Q96IV0 654 aa18.93■□□□□ 0.62
RNF4-208ENST00000507247 HMOX1P09601 288 aa18.92■□□□□ 0.62
RNF4-208ENST00000507247 LARP1Q6PKG0 1096 aaKnown RBP18.92■□□□□ 0.62
RNF4-208ENST00000507247 FNBP4Q8N3X1 1017 aaPredicted RBP18.92■□□□□ 0.62
RNF4-208ENST00000507247 EVA1CP58658 441 aa18.91■□□□□ 0.62
RNF4-208ENST00000507247 KDRP35968 1356 aa18.91■□□□□ 0.62
RNF4-208ENST00000507247 CRB1P82279 1406 aa18.91■□□□□ 0.62
RNF4-208ENST00000507247 WNK3Q9BYP7 1800 aa18.9■□□□□ 0.62
RNF4-208ENST00000507247 SULT6B1Q6IMI4 303 aa18.9■□□□□ 0.62
RNF4-208ENST00000507247 RSPH6AQ9H0K4 717 aa18.9■□□□□ 0.62
RNF4-208ENST00000507247 NLRP2Q9NX02 1062 aa18.9■□□□□ 0.62
RNF4-208ENST00000507247 TOM1L2Q6ZVM7 507 aa18.89■□□□□ 0.61
RNF4-208ENST00000507247 AFF2P51816 1311 aa18.89■□□□□ 0.61
RNF4-208ENST00000507247 ZNF772Q68DY9 489 aaPredicted RBP18.88■□□□□ 0.61
RNF4-208ENST00000507247 UNC5CLQ8IV45 518 aa18.88■□□□□ 0.61
RNF4-208ENST00000507247 FCHSD2O94868 740 aa18.87■□□□□ 0.61
RNF4-208ENST00000507247 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
RNF4-208ENST00000507247 PLEKHF1Q96S99 279 aa18.87■□□□□ 0.61
RNF4-208ENST00000507247 CARD10Q9BWT7 1032 aa18.87■□□□□ 0.61
RNF4-208ENST00000507247 USP21Q9UK80 565 aa18.87■□□□□ 0.61
RNF4-208ENST00000507247 PRKAR2BP31323 418 aa18.86■□□□□ 0.61
RNF4-208ENST00000507247 PARP4Q9UKK3 1724 aaKnown RBP18.86■□□□□ 0.61
RNF4-208ENST00000507247 MEGF6O75095 1541 aa18.85■□□□□ 0.61
RNF4-208ENST00000507247 SPATA31A1Q5TZJ5 1347 aa18.83■□□□□ 0.61
RNF4-208ENST00000507247 SPATA31A5Q5VU36 1347 aa18.83■□□□□ 0.61
RNF4-208ENST00000507247 SPATA31A7Q8IWB4 1347 aa18.83■□□□□ 0.61
RNF4-208ENST00000507247 DLG5Q8TDM6 1919 aa18.83■□□□□ 0.6
RNF4-208ENST00000507247 VPS72Q15906 364 aa18.83■□□□□ 0.6
RNF4-208ENST00000507247 RUNDC1Q96C34 613 aa18.83■□□□□ 0.6
RNF4-208ENST00000507247 USP35Q9P2H5 1018 aa18.83■□□□□ 0.6
RNF4-208ENST00000507247 GLI3P10071 1580 aa18.83■□□□□ 0.6
RNF4-208ENST00000507247 PKD1L3Q7Z443 1732 aa18.83■□□□□ 0.6
RNF4-208ENST00000507247 ATRNO75882 1429 aa18.83■□□□□ 0.6
RNF4-208ENST00000507247 PHACTR3Q96KR7 559 aa18.82■□□□□ 0.6
RNF4-208ENST00000507247 DISP2A7MBM2 1401 aa18.82■□□□□ 0.6
RNF4-208ENST00000507247 SHANK3Q9BYB0 1731 aa18.81■□□□□ 0.6
RNF4-208ENST00000507247 SENP3-EIF4A1A0A087X0R7 540 aa18.81■□□□□ 0.6
RNF4-208ENST00000507247 RXRBP28702 533 aa18.81■□□□□ 0.6
RNF4-208ENST00000507247 PNNQ9H307 717 aaKnown RBP18.8■□□□□ 0.6
RNF4-208ENST00000507247 CCDC9Q9Y3X0 531 aaKnown RBP18.8■□□□□ 0.6
RNF4-208ENST00000507247 TCP11L2Q8N4U5 519 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms