RNA–Protein interactions for RNA: ENST00000507123.1

SH3TC1-211, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-211ENST00000507123 TMC1Q8TDI8 760 aa23.85■■□□□ 1.41
SH3TC1-211ENST00000507123 SLC12A5Q9H2X9 1139 aa23.85■■□□□ 1.41
SH3TC1-211ENST00000507123 TIMELESSQ9UNS1 1208 aa23.85■■□□□ 1.41
SH3TC1-211ENST00000507123 A0A1W2PP64 1363 aa23.85■■□□□ 1.41
SH3TC1-211ENST00000507123 WDR17Q8IZU2 1322 aa23.84■■□□□ 1.41
SH3TC1-211ENST00000507123 WNK3Q9BYP7 1800 aa23.84■■□□□ 1.41
SH3TC1-211ENST00000507123 PDE3BQ13370 1112 aa23.84■■□□□ 1.41
SH3TC1-211ENST00000507123 HDGFL2Q7Z4V5 671 aaPredicted RBP23.84■■□□□ 1.41
SH3TC1-211ENST00000507123 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.84■■□□□ 1.41
SH3TC1-211ENST00000507123 LRRC37A3O60309 1634 aa23.84■■□□□ 1.41
SH3TC1-211ENST00000507123 RGPD5Q99666 1765 aa23.83■■□□□ 1.41
SH3TC1-211ENST00000507123 SOX12O15370 315 aa23.83■■□□□ 1.41
SH3TC1-211ENST00000507123 NINLQ9Y2I6 1382 aa23.82■■□□□ 1.4
SH3TC1-211ENST00000507123 NME9Q86XW9 330 aa23.82■■□□□ 1.4
SH3TC1-211ENST00000507123 EN1Q05925 392 aaPredicted RBP23.81■■□□□ 1.4
SH3TC1-211ENST00000507123 TOM1L2Q6ZVM7 507 aa23.81■■□□□ 1.4
SH3TC1-211ENST00000507123 TERF2IPQ9NYB0 399 aa23.81■■□□□ 1.4
SH3TC1-211ENST00000507123 TRIM37O94972 964 aa23.8■■□□□ 1.4
SH3TC1-211ENST00000507123 PEAK1Q9H792 1746 aa23.8■■□□□ 1.4
SH3TC1-211ENST00000507123 SLC24A1O60721 1099 aa23.79■■□□□ 1.4
SH3TC1-211ENST00000507123 USP47Q96K76 1375 aa23.78■■□□□ 1.4
SH3TC1-211ENST00000507123 OVOS2A0A0J9YW53 1432 aa23.78■■□□□ 1.4
SH3TC1-211ENST00000507123 OVOS2Q6IE36 1432 aa23.78■■□□□ 1.4
SH3TC1-211ENST00000507123 LTN1O94822 1766 aa23.77■■□□□ 1.4
SH3TC1-211ENST00000507123 OVOS2A0A0G2JMS6 1433 aa23.76■■□□□ 1.39
SH3TC1-211ENST00000507123 CAMKK2Q96RR4 588 aa23.76■■□□□ 1.39
SH3TC1-211ENST00000507123 CARD10Q9BWT7 1032 aa23.76■■□□□ 1.39
SH3TC1-211ENST00000507123 PARD3Q8TEW0 1356 aa23.76■■□□□ 1.39
SH3TC1-211ENST00000507123 RREB1Q92766 1687 aa23.74■■□□□ 1.39
SH3TC1-211ENST00000507123 C11orf95C9JLR9 678 aaPredicted RBP23.74■■□□□ 1.39
SH3TC1-211ENST00000507123 EZH2Q15910 746 aaKnown RBP23.74■■□□□ 1.39
SH3TC1-211ENST00000507123 APBA3O96018 575 aa23.73■■□□□ 1.39
SH3TC1-211ENST00000507123 CSB-PGBD3P0DP91 1061 aa23.73■■□□□ 1.39
SH3TC1-211ENST00000507123 DDB1Q16531 1140 aa23.73■■□□□ 1.39
SH3TC1-211ENST00000507123 CDCA7Q9BWT1 371 aaPredicted RBP23.73■■□□□ 1.39
SH3TC1-211ENST00000507123 LRP5O75197 1615 aa23.73■■□□□ 1.39
SH3TC1-211ENST00000507123 ERBB3P21860 1342 aa23.72■■□□□ 1.39
SH3TC1-211ENST00000507123 ANKRD36BQ8N2N9 1353 aa23.72■■□□□ 1.39
SH3TC1-211ENST00000507123 CCDC7Q96M83 1385 aa23.72■■□□□ 1.39
SH3TC1-211ENST00000507123 PSDA5PKW4 1024 aaPredicted RBP23.7■■□□□ 1.38
SH3TC1-211ENST00000507123 SBF2Q86WG5 1849 aa23.7■■□□□ 1.38
SH3TC1-211ENST00000507123 BCL9O00512 1426 aa23.69■■□□□ 1.38
SH3TC1-211ENST00000507123 TMF1P82094 1093 aa23.69■■□□□ 1.38
SH3TC1-211ENST00000507123 NUP188Q5SRE5 1749 aa23.69■■□□□ 1.38
SH3TC1-211ENST00000507123 MARCH10Q8NA82 808 aaPredicted RBP23.67■■□□□ 1.38
SH3TC1-211ENST00000507123 CCER1Q8TC90 406 aaPredicted RBP23.67■■□□□ 1.38
SH3TC1-211ENST00000507123 RGPD3A6NKT7 1758 aaPredicted RBP23.67■■□□□ 1.38
SH3TC1-211ENST00000507123 RGPD4Q7Z3J3 1758 aa23.67■■□□□ 1.38
SH3TC1-211ENST00000507123 TNS2Q63HR2 1409 aa23.67■■□□□ 1.38
SH3TC1-211ENST00000507123 R3HDM1Q15032 1099 aaKnown RBP23.65■■□□□ 1.38
SH3TC1-211ENST00000507123 ANKRD24Q8TF21 1146 aa23.64■■□□□ 1.37
SH3TC1-211ENST00000507123 COG3Q96JB2 828 aa23.63■■□□□ 1.37
SH3TC1-211ENST00000507123 MYOM1P52179 1685 aa23.63■■□□□ 1.37
SH3TC1-211ENST00000507123 NLRP2Q9NX02 1062 aa23.62■■□□□ 1.37
SH3TC1-211ENST00000507123 FAM208AQ9UK61 1670 aaKnown RBP23.62■■□□□ 1.37
SH3TC1-211ENST00000507123 EXOC5O00471 708 aa23.61■■□□□ 1.37
SH3TC1-211ENST00000507123 CDCA8Q53HL2 280 aa23.61■■□□□ 1.37
SH3TC1-211ENST00000507123 IP6K1Q92551 441 aa23.61■■□□□ 1.37
SH3TC1-211ENST00000507123 BCL11BQ9C0K0 894 aaPredicted RBP23.61■■□□□ 1.37
SH3TC1-211ENST00000507123 PTF1AQ7RTS3 328 aa23.59■■□□□ 1.37
SH3TC1-211ENST00000507123 MAP3K19Q56UN5 1328 aa23.59■■□□□ 1.37
SH3TC1-211ENST00000507123 PLSCR1O15162 318 aa23.58■■□□□ 1.37
SH3TC1-211ENST00000507123 KIF20BQ96Q89 1820 aa23.57■■□□□ 1.36
SH3TC1-211ENST00000507123 FYB1O15117 783 aa23.57■■□□□ 1.36
SH3TC1-211ENST00000507123 IL2RBP14784 551 aa23.57■■□□□ 1.36
SH3TC1-211ENST00000507123 RTL1A6NKG5 1358 aa23.56■■□□□ 1.36
SH3TC1-211ENST00000507123 NHSQ6T4R5 1651 aa23.55■■□□□ 1.36
SH3TC1-211ENST00000507123 FBLN1P23142 703 aa23.55■■□□□ 1.36
SH3TC1-211ENST00000507123 HOXC9P31274 260 aa23.55■■□□□ 1.36
SH3TC1-211ENST00000507123 NBPF14Q5TI25 921 aa23.54■■□□□ 1.36
SH3TC1-211ENST00000507123 GGNBP2Q9H3C7 697 aa23.53■■□□□ 1.36
SH3TC1-211ENST00000507123 AMPHP49418 695 aa23.51■■□□□ 1.35
SH3TC1-211ENST00000507123 LTV1Q96GA3 475 aaPredicted RBP23.51■■□□□ 1.35
SH3TC1-211ENST00000507123 RRS1Q15050 365 aaKnown RBP23.5■■□□□ 1.35
SH3TC1-211ENST00000507123 CARD14Q9BXL6 1004 aa23.5■■□□□ 1.35
SH3TC1-211ENST00000507123 NSD3Q9BZ95 1437 aa23.5■■□□□ 1.35
SH3TC1-211ENST00000507123 KCNQ2O43526 872 aa23.49■■□□□ 1.35
SH3TC1-211ENST00000507123 PROM2Q8N271 834 aa23.49■■□□□ 1.35
SH3TC1-211ENST00000507123 RGPD2P0DJD1 1756 aa23.49■■□□□ 1.35
SH3TC1-211ENST00000507123 ANO8Q9HCE9 1232 aaPredicted RBP23.47■■□□□ 1.35
SH3TC1-211ENST00000507123 MEGF6O75095 1541 aa23.45■■□□□ 1.34
SH3TC1-211ENST00000507123 KIF24Q5T7B8 1368 aa23.45■■□□□ 1.34
SH3TC1-211ENST00000507123 ACSBG1Q96GR2 724 aa23.45■■□□□ 1.34
SH3TC1-211ENST00000507123 BTAF1O14981 1849 aa23.45■■□□□ 1.34
SH3TC1-211ENST00000507123 SHANK3Q9BYB0 1731 aa23.45■■□□□ 1.34
SH3TC1-211ENST00000507123 EIF4G2P78344 907 aaKnown RBP eCLIP23.44■■□□□ 1.34
SH3TC1-211ENST00000507123 SMG6Q86US8 1419 aaKnown RBP23.43■■□□□ 1.34
SH3TC1-211ENST00000507123 INSRP06213 1382 aa23.43■■□□□ 1.34
SH3TC1-211ENST00000507123 FLT4P35916 1363 aa23.43■■□□□ 1.34
SH3TC1-211ENST00000507123 CASZ1Q86V15 1759 aa23.43■■□□□ 1.34
SH3TC1-211ENST00000507123 TXNRD1Q16881 649 aa23.43■■□□□ 1.34
SH3TC1-211ENST00000507123 ANKRD26Q9UPS8 1709 aa23.42■■□□□ 1.34
SH3TC1-211ENST00000507123 NBPF6Q5VWK0 638 aa23.41■■□□□ 1.34
SH3TC1-211ENST00000507123 NBPF4Q96M43 638 aa23.41■■□□□ 1.34
SH3TC1-211ENST00000507123 HSPA5P11021 654 aaKnown RBP23.4■■□□□ 1.34
SH3TC1-211ENST00000507123 PAPPAQ13219 1627 aa23.4■■□□□ 1.34
SH3TC1-211ENST00000507123 HSP90AB2PQ58FF8 381 aa23.39■■□□□ 1.33
SH3TC1-211ENST00000507123 DDX54Q8TDD1 881 aaKnown RBP23.39■■□□□ 1.33
SH3TC1-211ENST00000507123 CGNL1Q0VF96 1302 aa23.38■■□□□ 1.33
SH3TC1-211ENST00000507123 DOT1LQ8TEK3 1739 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms