RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 MAP2P11137 1827 aaKnown RBP13.29□□□□□ -0.28
SFXN1-205ENST00000506963 IP6K1Q92551 441 aa13.29□□□□□ -0.28
SFXN1-205ENST00000506963 RGPD5Q99666 1765 aa13.29□□□□□ -0.28
SFXN1-205ENST00000506963 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
SFXN1-205ENST00000506963 SOX12O15370 315 aa13.28□□□□□ -0.28
SFXN1-205ENST00000506963 POTEAQ6S8J7 498 aa13.28□□□□□ -0.28
SFXN1-205ENST00000506963 MORC1Q86VD1 984 aa13.28□□□□□ -0.28
SFXN1-205ENST00000506963 AXIN2Q9Y2T1 843 aa13.28□□□□□ -0.28
SFXN1-205ENST00000506963 CDK12Q9NYV4 1490 aaPredicted RBP13.28□□□□□ -0.28
SFXN1-205ENST00000506963 PEAK1Q9H792 1746 aa13.27□□□□□ -0.28
SFXN1-205ENST00000506963 QTRT2Q9H974 415 aaKnown RBP13.27□□□□□ -0.29
SFXN1-205ENST00000506963 POLKQ9UBT6 870 aa13.27□□□□□ -0.29
SFXN1-205ENST00000506963 FLT4P35916 1363 aa13.27□□□□□ -0.29
SFXN1-205ENST00000506963 INSRP06213 1382 aa13.26□□□□□ -0.29
SFXN1-205ENST00000506963 GLI3P10071 1580 aa13.26□□□□□ -0.29
SFXN1-205ENST00000506963 ERBB3P21860 1342 aa13.26□□□□□ -0.29
SFXN1-205ENST00000506963 FBLN1P23142 703 aa13.26□□□□□ -0.29
SFXN1-205ENST00000506963 HOXC9P31274 260 aa13.26□□□□□ -0.29
SFXN1-205ENST00000506963 RBM6P78332 1123 aaKnown RBP13.26□□□□□ -0.29
SFXN1-205ENST00000506963 DDX10Q13206 875 aaKnown RBP13.26□□□□□ -0.29
SFXN1-205ENST00000506963 SPATA31A5Q5VU36 1347 aa13.26□□□□□ -0.29
SFXN1-205ENST00000506963 SPATA31A7Q8IWB4 1347 aa13.26□□□□□ -0.29
SFXN1-205ENST00000506963 WDR17Q8IZU2 1322 aa13.26□□□□□ -0.29
SFXN1-205ENST00000506963 GJD4Q96KN9 370 aaPredicted RBP13.26□□□□□ -0.29
SFXN1-205ENST00000506963 FAM208AQ9UK61 1670 aaKnown RBP13.26□□□□□ -0.29
SFXN1-205ENST00000506963 CRB1P82279 1406 aa13.25□□□□□ -0.29
SFXN1-205ENST00000506963 ONECUT3O60422 494 aaPredicted RBP13.25□□□□□ -0.29
SFXN1-205ENST00000506963 RRS1Q15050 365 aaKnown RBP13.25□□□□□ -0.29
SFXN1-205ENST00000506963 SPATA31A1Q5TZJ5 1347 aa13.24□□□□□ -0.29
SFXN1-205ENST00000506963 RXRBP28702 533 aa13.24□□□□□ -0.29
SFXN1-205ENST00000506963 AMPHP49418 695 aa13.24□□□□□ -0.29
SFXN1-205ENST00000506963 CC2D1BQ5T0F9 858 aaKnown RBP13.24□□□□□ -0.29
SFXN1-205ENST00000506963 PARD3Q8TEW0 1356 aa13.23□□□□□ -0.29
SFXN1-205ENST00000506963 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
SFXN1-205ENST00000506963 EVA1CP58658 441 aa13.23□□□□□ -0.29
SFXN1-205ENST00000506963 LARP1Q6PKG0 1096 aaKnown RBP13.23□□□□□ -0.29
SFXN1-205ENST00000506963 EMILIN1Q9Y6C2 1016 aa13.23□□□□□ -0.29
SFXN1-205ENST00000506963 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
SFXN1-205ENST00000506963 ANKRD24Q8TF21 1146 aa13.22□□□□□ -0.29
SFXN1-205ENST00000506963 CARD10Q9BWT7 1032 aa13.22□□□□□ -0.29
SFXN1-205ENST00000506963 STRN4Q9NRL3 753 aa13.22□□□□□ -0.29
SFXN1-205ENST00000506963 THRAP3Q9Y2W1 955 aaKnown RBP13.22□□□□□ -0.29
SFXN1-205ENST00000506963 THSD7AQ9UPZ6 1657 aa13.21□□□□□ -0.29
SFXN1-205ENST00000506963 TNNT2P45379 298 aaPredicted RBP13.21□□□□□ -0.29
SFXN1-205ENST00000506963 HSP90AB2PQ58FF8 381 aa13.21□□□□□ -0.29
SFXN1-205ENST00000506963 TCP11L2Q8N4U5 519 aa13.2□□□□□ -0.3
SFXN1-205ENST00000506963 NCAPD2Q15021 1401 aa13.2□□□□□ -0.3
SFXN1-205ENST00000506963 WNK3Q9BYP7 1800 aa13.19□□□□□ -0.3
SFXN1-205ENST00000506963 RALBP1Q15311 655 aa13.19□□□□□ -0.3
SFXN1-205ENST00000506963 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
SFXN1-205ENST00000506963 RGS12O14924 1447 aa13.19□□□□□ -0.3
SFXN1-205ENST00000506963 CSB-PGBD3P0DP91 1061 aa13.18□□□□□ -0.3
SFXN1-205ENST00000506963 MTHFSP49914 203 aa13.18□□□□□ -0.3
SFXN1-205ENST00000506963 CDCA7Q9BWT1 371 aaPredicted RBP13.18□□□□□ -0.3
SFXN1-205ENST00000506963 CCDC9Q9Y3X0 531 aaKnown RBP13.18□□□□□ -0.3
SFXN1-205ENST00000506963 DISP2A7MBM2 1401 aa13.18□□□□□ -0.3
SFXN1-205ENST00000506963 PARP4Q9UKK3 1724 aaKnown RBP13.17□□□□□ -0.3
SFXN1-205ENST00000506963 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
SFXN1-205ENST00000506963 PPP2R1AP30153 589 aa13.17□□□□□ -0.3
SFXN1-205ENST00000506963 RGPD2P0DJD1 1756 aa13.17□□□□□ -0.3
SFXN1-205ENST00000506963 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
SFXN1-205ENST00000506963 NBPF6Q5VWK0 638 aa13.16□□□□□ -0.3
SFXN1-205ENST00000506963 NBPF4Q96M43 638 aa13.16□□□□□ -0.3
SFXN1-205ENST00000506963 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
SFXN1-205ENST00000506963 PLEKHG2Q9H7P9 1386 aa13.16□□□□□ -0.3
SFXN1-205ENST00000506963 RGPD1P0DJD0 1748 aa13.16□□□□□ -0.3
SFXN1-205ENST00000506963 EIF4A2Q14240 407 aaKnown RBP13.15□□□□□ -0.3
SFXN1-205ENST00000506963 FAM98CQ17RN3 349 aaKnown RBP13.15□□□□□ -0.3
SFXN1-205ENST00000506963 ILDR2Q71H61 639 aa13.15□□□□□ -0.3
SFXN1-205ENST00000506963 SEPT12Q8IYM1 358 aa13.15□□□□□ -0.3
SFXN1-205ENST00000506963 IGSF1Q8N6C5 1336 aa13.14□□□□□ -0.31
SFXN1-205ENST00000506963 BRWD3Q6RI45 1802 aa13.14□□□□□ -0.31
SFXN1-205ENST00000506963 IL13P35225 146 aa13.14□□□□□ -0.31
SFXN1-205ENST00000506963 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
SFXN1-205ENST00000506963 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
SFXN1-205ENST00000506963 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
SFXN1-205ENST00000506963 LRRC37A3O60309 1634 aa13.13□□□□□ -0.31
SFXN1-205ENST00000506963 EYA1Q99502 592 aa13.13□□□□□ -0.31
SFXN1-205ENST00000506963 KDRP35968 1356 aa13.12□□□□□ -0.31
SFXN1-205ENST00000506963 IL2RBP14784 551 aa13.12□□□□□ -0.31
SFXN1-205ENST00000506963 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
SFXN1-205ENST00000506963 DIAPH1O60610 1272 aaKnown RBP13.11□□□□□ -0.31
SFXN1-205ENST00000506963 CNGB1Q14028 1251 aaPredicted RBP13.11□□□□□ -0.31
SFXN1-205ENST00000506963 CFAP53Q96M91 514 aa13.11□□□□□ -0.31
SFXN1-205ENST00000506963 MEGF6O75095 1541 aa13.1□□□□□ -0.31
SFXN1-205ENST00000506963 OVOS2A0A0G2JMS6 1433 aa13.1□□□□□ -0.31
SFXN1-205ENST00000506963 TNS2Q63HR2 1409 aa13.1□□□□□ -0.31
SFXN1-205ENST00000506963 BCL9O00512 1426 aa13.09□□□□□ -0.31
SFXN1-205ENST00000506963 KRT27Q7Z3Y8 459 aa13.09□□□□□ -0.31
SFXN1-205ENST00000506963 PKD1L3Q7Z443 1732 aa13.09□□□□□ -0.31
SFXN1-205ENST00000506963 DDB1Q16531 1140 aa13.08□□□□□ -0.32
SFXN1-205ENST00000506963 USHBP1Q8N6Y0 703 aa13.08□□□□□ -0.32
SFXN1-205ENST00000506963 RAPGEF4Q8WZA2 1011 aa13.08□□□□□ -0.32
SFXN1-205ENST00000506963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.32
SFXN1-205ENST00000506963 SHANK3Q9BYB0 1731 aa13.08□□□□□ -0.32
SFXN1-205ENST00000506963 EXOC5O00471 708 aa13.07□□□□□ -0.32
SFXN1-205ENST00000506963 A0A0G2JS52 829 aa13.06□□□□□ -0.32
SFXN1-205ENST00000506963 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
SFXN1-205ENST00000506963 MYT1Q01538 1121 aa13.06□□□□□ -0.32
SFXN1-205ENST00000506963 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms