RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 SHROOM4Q9ULL8 1493 aa8□□□□□ -1.13
CLDND1-212ENST00000506885 J3QL48 77 aa8□□□□□ -1.13
CLDND1-212ENST00000506885 IGSF3O75054 1194 aa8□□□□□ -1.13
CLDND1-212ENST00000506885 TMCO4Q5TGY1 634 aa8□□□□□ -1.13
CLDND1-212ENST00000506885 SH3BP5LQ7L8J4 393 aa8□□□□□ -1.13
CLDND1-212ENST00000506885 SH3RF1Q7Z6J0 888 aa8□□□□□ -1.13
CLDND1-212ENST00000506885 ZSCAN1Q8NBB4 408 aa8□□□□□ -1.13
CLDND1-212ENST00000506885 CDK15Q96Q40 435 aa8□□□□□ -1.13
CLDND1-212ENST00000506885 ATP13A2Q9NQ11 1180 aa8□□□□□ -1.13
CLDND1-212ENST00000506885 TERTO14746 1132 aaKnown RBP7.99□□□□□ -1.13
CLDND1-212ENST00000506885 SNRPBP14678 240 aaKnown RBP7.99□□□□□ -1.13
CLDND1-212ENST00000506885 ARHGAP9Q9BRR9 750 aa7.99□□□□□ -1.13
CLDND1-212ENST00000506885 CDV3Q9UKY7 258 aaKnown RBP7.99□□□□□ -1.13
CLDND1-212ENST00000506885 MTMR7Q9Y216 660 aa7.99□□□□□ -1.13
CLDND1-212ENST00000506885 TRMT44Q8IYL2 757 aaKnown RBP7.98□□□□□ -1.13
CLDND1-212ENST00000506885 PRM3Q9NNZ6 103 aa7.98□□□□□ -1.13
CLDND1-212ENST00000506885 MAGEB6P1A0A0J9YX57 407 aa7.97□□□□□ -1.13
CLDND1-212ENST00000506885 ADH1CP00326 375 aa7.97□□□□□ -1.13
CLDND1-212ENST00000506885 NR5A1Q13285 461 aa7.97□□□□□ -1.13
CLDND1-212ENST00000506885 ZBTB33Q86T24 672 aa7.97□□□□□ -1.13
CLDND1-212ENST00000506885 C1QTNF2Q9BXJ5 285 aa7.97□□□□□ -1.13
CLDND1-212ENST00000506885 MAP4K5Q9Y4K4 846 aa7.97□□□□□ -1.13
CLDND1-212ENST00000506885 ARID5BQ14865 1188 aa7.96□□□□□ -1.14
CLDND1-212ENST00000506885 HPS1Q92902 700 aa7.96□□□□□ -1.14
CLDND1-212ENST00000506885 CCDC97Q96F63 343 aaPredicted RBP7.96□□□□□ -1.14
CLDND1-212ENST00000506885 TRIM47Q96LD4 638 aa7.96□□□□□ -1.14
CLDND1-212ENST00000506885 SENP2Q9HC62 589 aa7.96□□□□□ -1.14
CLDND1-212ENST00000506885 HMX1Q9NP08 348 aaPredicted RBP7.96□□□□□ -1.14
CLDND1-212ENST00000506885 TLL2Q9Y6L7 1015 aa7.96□□□□□ -1.14
CLDND1-212ENST00000506885 MFAP1P55081 439 aaKnown RBP7.95□□□□□ -1.14
CLDND1-212ENST00000506885 C4orf48Q5BLP8 95 aa7.95□□□□□ -1.14
CLDND1-212ENST00000506885 ZNF592Q92610 1267 aa7.95□□□□□ -1.14
CLDND1-212ENST00000506885 SERPINA10Q9UK55 444 aa7.95□□□□□ -1.14
CLDND1-212ENST00000506885 NNTQ13423 1086 aa7.94□□□□□ -1.14
CLDND1-212ENST00000506885 LCE2CQ5TA81 110 aa7.94□□□□□ -1.14
CLDND1-212ENST00000506885 TRIM52Q96A61 297 aa7.94□□□□□ -1.14
CLDND1-212ENST00000506885 SLC10A4Q96EP9 437 aa7.94□□□□□ -1.14
CLDND1-212ENST00000506885 CARD14Q9BXL6 1004 aa7.94□□□□□ -1.14
CLDND1-212ENST00000506885 ZNF777Q9ULD5 760 aaPredicted RBP7.94□□□□□ -1.14
CLDND1-212ENST00000506885 RBM25P49756 843 aaKnown RBP7.93□□□□□ -1.14
CLDND1-212ENST00000506885 ERFEQ4G0M1 354 aa7.93□□□□□ -1.14
CLDND1-212ENST00000506885 VASH1Q7L8A9 365 aaPredicted RBP7.93□□□□□ -1.14
CLDND1-212ENST00000506885 EPS8L1Q8TE68 723 aa7.93□□□□□ -1.14
CLDND1-212ENST00000506885 TRIM34Q9BYJ4 488 aa7.93□□□□□ -1.14
CLDND1-212ENST00000506885 NDUFB9Q9Y6M9 179 aa7.93□□□□□ -1.14
CLDND1-212ENST00000506885 CAPN5O15484 640 aaPredicted RBP7.92□□□□□ -1.14
CLDND1-212ENST00000506885 MCCD1P59942 119 aaPredicted RBP7.92□□□□□ -1.14
CLDND1-212ENST00000506885 MCM6Q14566 821 aa7.92□□□□□ -1.14
CLDND1-212ENST00000506885 FOXD4L5Q5VV16 416 aaPredicted RBP7.92□□□□□ -1.14
CLDND1-212ENST00000506885 PROSER2Q86WR7 435 aaPredicted RBP7.92□□□□□ -1.14
CLDND1-212ENST00000506885 SLC16A10Q8TF71 515 aa7.92□□□□□ -1.14
CLDND1-212ENST00000506885 FOXD4L4Q8WXT5 416 aaPredicted RBP7.92□□□□□ -1.14
CLDND1-212ENST00000506885 GJD4Q96KN9 370 aaPredicted RBP7.92□□□□□ -1.14
CLDND1-212ENST00000506885 GZF1Q9H116 711 aaPredicted RBP7.92□□□□□ -1.14
CLDND1-212ENST00000506885 ZNF330Q9Y3S2 320 aaPredicted RBP7.92□□□□□ -1.14
CLDND1-212ENST00000506885 GRM5P41594 1212 aa7.91□□□□□ -1.14
CLDND1-212ENST00000506885 NBPF20Q3BBV1 942 aa7.91□□□□□ -1.14
CLDND1-212ENST00000506885 KIFC2Q96AC6 838 aa7.91□□□□□ -1.14
CLDND1-212ENST00000506885 ZBBXA8MT70 800 aa7.9□□□□□ -1.14
CLDND1-212ENST00000506885 DHX9Q08211 1270 aaKnown RBP7.9□□□□□ -1.14
CLDND1-212ENST00000506885 DZIP3Q86Y13 1208 aaKnown RBP7.9□□□□□ -1.14
CLDND1-212ENST00000506885 RETREG2Q8NC44 543 aa7.9□□□□□ -1.14
CLDND1-212ENST00000506885 MTMR14Q8NCE2 650 aa7.9□□□□□ -1.14
CLDND1-212ENST00000506885 ADAM32Q8TC27 787 aa7.9□□□□□ -1.14
CLDND1-212ENST00000506885 CCDC125Q86Z20 511 aa7.89□□□□□ -1.15
CLDND1-212ENST00000506885 EMILIN1Q9Y6C2 1016 aa7.89□□□□□ -1.15
CLDND1-212ENST00000506885 FSHRP23945 695 aa7.88□□□□□ -1.15
CLDND1-212ENST00000506885 WDR4P57081 412 aaKnown RBP7.88□□□□□ -1.15
CLDND1-212ENST00000506885 CCDC116Q8IYX3 515 aa7.88□□□□□ -1.15
CLDND1-212ENST00000506885 ZNF428Q96B54 188 aa7.88□□□□□ -1.15
CLDND1-212ENST00000506885 KCTD15Q96SI1 283 aaPredicted RBP7.88□□□□□ -1.15
CLDND1-212ENST00000506885 SNRKQ9NRH2 765 aa7.88□□□□□ -1.15
CLDND1-212ENST00000506885 HMGB1P09429 215 aaKnown RBP7.87□□□□□ -1.15
CLDND1-212ENST00000506885 XP32Q5T750 250 aa7.87□□□□□ -1.15
CLDND1-212ENST00000506885 PGPEP1Q9NXJ5 209 aa7.87□□□□□ -1.15
CLDND1-212ENST00000506885 TIMP2P16035 220 aa7.86□□□□□ -1.15
CLDND1-212ENST00000506885 NR1H3Q13133 447 aa7.86□□□□□ -1.15
CLDND1-212ENST00000506885 FNBP4Q8N3X1 1017 aaPredicted RBP7.86□□□□□ -1.15
CLDND1-212ENST00000506885 OCSTAMPQ9BR26 566 aa7.86□□□□□ -1.15
CLDND1-212ENST00000506885 KLF16Q9BXK1 252 aaPredicted RBP7.86□□□□□ -1.15
CLDND1-212ENST00000506885 UPP2O95045 317 aa7.85□□□□□ -1.15
CLDND1-212ENST00000506885 ZIC2O95409 532 aaPredicted RBP7.85□□□□□ -1.15
CLDND1-212ENST00000506885 NR3C2P08235 984 aa7.85□□□□□ -1.15
CLDND1-212ENST00000506885 IRF5Q13568 498 aa7.85□□□□□ -1.15
CLDND1-212ENST00000506885 SCARF1Q14162 830 aa7.85□□□□□ -1.15
CLDND1-212ENST00000506885 SEPT12Q8IYM1 358 aa7.85□□□□□ -1.15
CLDND1-212ENST00000506885 E9PSI1 815 aa7.84□□□□□ -1.15
CLDND1-212ENST00000506885 KRTAP4-8Q9BYQ9 185 aa7.84□□□□□ -1.15
CLDND1-212ENST00000506885 FBXO45P0C2W1 286 aa7.83□□□□□ -1.16
CLDND1-212ENST00000506885 BMP1P13497 986 aa7.83□□□□□ -1.16
CLDND1-212ENST00000506885 RNF20Q5VTR2 975 aa7.83□□□□□ -1.16
CLDND1-212ENST00000506885 ITPKCQ96DU7 683 aa7.83□□□□□ -1.16
CLDND1-212ENST00000506885 POM121Q96HA1 1249 aa7.83□□□□□ -1.16
CLDND1-212ENST00000506885 NXF1Q9UBU9 619 aaKnown RBP7.83□□□□□ -1.16
CLDND1-212ENST00000506885 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
CLDND1-212ENST00000506885 GMPRP36959 345 aa7.82□□□□□ -1.16
CLDND1-212ENST00000506885 PPP1R26Q5T8A7 1209 aaPredicted RBP7.82□□□□□ -1.16
CLDND1-212ENST00000506885 MRPL14Q6P1L8 145 aaKnown RBP7.82□□□□□ -1.16
CLDND1-212ENST00000506885 PCDHB9Q9Y5E1 797 aa7.82□□□□□ -1.16
CLDND1-212ENST00000506885 ESPNB1AK53 854 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms