RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 KIAA0232Q92628 1395 aa12.04□□□□□ -0.48
SCAMP1-202ENST00000506858 PPM1GO15355 546 aaPredicted RBP12.04□□□□□ -0.48
SCAMP1-202ENST00000506858 MEX3CQ5U5Q3 659 aaKnown RBP12.04□□□□□ -0.48
SCAMP1-202ENST00000506858 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
SCAMP1-202ENST00000506858 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
SCAMP1-202ENST00000506858 PRDM11Q9NQV5 511 aa12.03□□□□□ -0.48
SCAMP1-202ENST00000506858 ARHGEF25Q86VW2 580 aa12.02□□□□□ -0.49
SCAMP1-202ENST00000506858 NGLY1Q96IV0 654 aa12.02□□□□□ -0.49
SCAMP1-202ENST00000506858 AXIN2Q9Y2T1 843 aa12.02□□□□□ -0.49
SCAMP1-202ENST00000506858 MAP3K19Q56UN5 1328 aa12.02□□□□□ -0.49
SCAMP1-202ENST00000506858 SPATA31A6Q5VVP1 1343 aa12.02□□□□□ -0.49
SCAMP1-202ENST00000506858 SHPRHQ149N8 1683 aa12.02□□□□□ -0.49
SCAMP1-202ENST00000506858 LTV1Q96GA3 475 aaPredicted RBP12.01□□□□□ -0.49
SCAMP1-202ENST00000506858 POLKQ9UBT6 870 aa12.01□□□□□ -0.49
SCAMP1-202ENST00000506858 KIF20BQ96Q89 1820 aa12.01□□□□□ -0.49
SCAMP1-202ENST00000506858 KCNH5Q8NCM2 988 aa12□□□□□ -0.49
SCAMP1-202ENST00000506858 COL22A1Q8NFW1 1626 aaPredicted RBP12□□□□□ -0.49
SCAMP1-202ENST00000506858 SLIT3O75094 1523 aa12□□□□□ -0.49
SCAMP1-202ENST00000506858 HSP90AB2PQ58FF8 381 aa12□□□□□ -0.49
SCAMP1-202ENST00000506858 NFAT5O94916 1531 aa11.99□□□□□ -0.49
SCAMP1-202ENST00000506858 PPP2R1AP30153 589 aa11.99□□□□□ -0.49
SCAMP1-202ENST00000506858 AMPHP49418 695 aa11.99□□□□□ -0.49
SCAMP1-202ENST00000506858 MTHFSP49914 203 aa11.99□□□□□ -0.49
SCAMP1-202ENST00000506858 STRN4Q9NRL3 753 aa11.99□□□□□ -0.49
SCAMP1-202ENST00000506858 BTG4Q9NY30 223 aa11.99□□□□□ -0.49
SCAMP1-202ENST00000506858 CRYBG1Q9Y4K1 1723 aa11.99□□□□□ -0.49
SCAMP1-202ENST00000506858 PHRF1Q9P1Y6 1649 aaKnown RBP11.99□□□□□ -0.49
SCAMP1-202ENST00000506858 NSD2O96028 1365 aa11.98□□□□□ -0.49
SCAMP1-202ENST00000506858 ABCA3Q99758 1704 aa11.98□□□□□ -0.49
SCAMP1-202ENST00000506858 DIEXFQ68CQ4 756 aaKnown RBP11.98□□□□□ -0.49
SCAMP1-202ENST00000506858 PRKRIP1Q9H875 184 aaPredicted RBP11.98□□□□□ -0.49
SCAMP1-202ENST00000506858 NPC1L1Q9UHC9 1359 aa11.98□□□□□ -0.49
SCAMP1-202ENST00000506858 AFF2P51816 1311 aa11.97□□□□□ -0.49
SCAMP1-202ENST00000506858 HOXC9P31274 260 aa11.97□□□□□ -0.49
SCAMP1-202ENST00000506858 CCDC184Q52MB2 194 aa11.97□□□□□ -0.49
SCAMP1-202ENST00000506858 PARD3Q8TEW0 1356 aa11.96□□□□□ -0.49
SCAMP1-202ENST00000506858 IP6K1Q92551 441 aa11.96□□□□□ -0.5
SCAMP1-202ENST00000506858 RGS17Q9UGC6 210 aaPredicted RBP11.96□□□□□ -0.5
SCAMP1-202ENST00000506858 USP21Q9UK80 565 aa11.96□□□□□ -0.5
SCAMP1-202ENST00000506858 CPDO75976 1380 aa11.95□□□□□ -0.5
SCAMP1-202ENST00000506858 CAMTA1Q9Y6Y1 1673 aa11.95□□□□□ -0.5
SCAMP1-202ENST00000506858 ANP32CO43423 234 aa11.95□□□□□ -0.5
SCAMP1-202ENST00000506858 EVA1CP58658 441 aa11.95□□□□□ -0.5
SCAMP1-202ENST00000506858 LARP1Q6PKG0 1096 aaKnown RBP11.95□□□□□ -0.5
SCAMP1-202ENST00000506858 USP35Q9P2H5 1018 aa11.95□□□□□ -0.5
SCAMP1-202ENST00000506858 FNBP4Q8N3X1 1017 aaPredicted RBP11.94□□□□□ -0.5
SCAMP1-202ENST00000506858 ANKRD24Q8TF21 1146 aa11.94□□□□□ -0.5
SCAMP1-202ENST00000506858 CCDC9Q9Y3X0 531 aaKnown RBP11.94□□□□□ -0.5
SCAMP1-202ENST00000506858 PEAK1Q9H792 1746 aa11.94□□□□□ -0.5
SCAMP1-202ENST00000506858 AATKQ6ZMQ8 1374 aa11.94□□□□□ -0.5
SCAMP1-202ENST00000506858 USP54Q70EL1 1684 aa11.94□□□□□ -0.5
SCAMP1-202ENST00000506858 MAP2P11137 1827 aaKnown RBP11.94□□□□□ -0.5
SCAMP1-202ENST00000506858 ANKRD26Q9UPS8 1709 aa11.94□□□□□ -0.5
SCAMP1-202ENST00000506858 CSB-PGBD3P0DP91 1061 aa11.93□□□□□ -0.5
SCAMP1-202ENST00000506858 RALBP1Q15311 655 aa11.93□□□□□ -0.5
SCAMP1-202ENST00000506858 USHBP1Q8N6Y0 703 aa11.93□□□□□ -0.5
SCAMP1-202ENST00000506858 BCL9LQ86UU0 1499 aa11.93□□□□□ -0.5
SCAMP1-202ENST00000506858 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
SCAMP1-202ENST00000506858 UNC5CLQ8IV45 518 aa11.93□□□□□ -0.5
SCAMP1-202ENST00000506858 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
SCAMP1-202ENST00000506858 MIER1Q8N108 512 aa11.93□□□□□ -0.5
SCAMP1-202ENST00000506858 LTN1O94822 1766 aa11.92□□□□□ -0.5
SCAMP1-202ENST00000506858 COL18A1P39060 1754 aa11.92□□□□□ -0.5
SCAMP1-202ENST00000506858 RGPD5Q99666 1765 aa11.92□□□□□ -0.5
SCAMP1-202ENST00000506858 EIF4A2Q14240 407 aaKnown RBP11.92□□□□□ -0.5
SCAMP1-202ENST00000506858 POTEAQ6S8J7 498 aa11.92□□□□□ -0.5
SCAMP1-202ENST00000506858 NLRP2Q9NX02 1062 aa11.92□□□□□ -0.5
SCAMP1-202ENST00000506858 SLIT2O94813 1529 aa11.91□□□□□ -0.5
SCAMP1-202ENST00000506858 NBPF6Q5VWK0 638 aa11.91□□□□□ -0.5
SCAMP1-202ENST00000506858 TOM1L2Q6ZVM7 507 aa11.91□□□□□ -0.5
SCAMP1-202ENST00000506858 NBPF4Q96M43 638 aa11.91□□□□□ -0.5
SCAMP1-202ENST00000506858 QTRT2Q9H974 415 aaKnown RBP11.91□□□□□ -0.5
SCAMP1-202ENST00000506858 FLT4P35916 1363 aa11.91□□□□□ -0.5
SCAMP1-202ENST00000506858 MYBBP1AQ9BQG0 1328 aaKnown RBP11.91□□□□□ -0.5
SCAMP1-202ENST00000506858 COL5A2P05997 1499 aaPredicted RBP11.9□□□□□ -0.51
SCAMP1-202ENST00000506858 IL13P35225 146 aa11.89□□□□□ -0.51
SCAMP1-202ENST00000506858 EYA1Q99502 592 aa11.89□□□□□ -0.51
SCAMP1-202ENST00000506858 COL14A1Q05707 1796 aaKnown RBP11.89□□□□□ -0.51
SCAMP1-202ENST00000506858 ERBB3P21860 1342 aa11.89□□□□□ -0.51
SCAMP1-202ENST00000506858 LMO7Q8WWI1 1683 aa11.89□□□□□ -0.51
SCAMP1-202ENST00000506858 INSRP06213 1382 aa11.89□□□□□ -0.51
SCAMP1-202ENST00000506858 AEBP1Q8IUX7 1158 aa11.89□□□□□ -0.51
SCAMP1-202ENST00000506858 PLCH1Q4KWH8 1693 aa11.89□□□□□ -0.51
SCAMP1-202ENST00000506858 WDR17Q8IZU2 1322 aa11.88□□□□□ -0.51
SCAMP1-202ENST00000506858 U2SURPO15042 1029 aaKnown RBP11.88□□□□□ -0.51
SCAMP1-202ENST00000506858 DIAPH1O60610 1272 aaKnown RBP11.88□□□□□ -0.51
SCAMP1-202ENST00000506858 SENP3-EIF4A1A0A087X0R7 540 aa11.87□□□□□ -0.51
SCAMP1-202ENST00000506858 HMOX1P09601 288 aa11.87□□□□□ -0.51
SCAMP1-202ENST00000506858 VPS72Q15906 364 aa11.87□□□□□ -0.51
SCAMP1-202ENST00000506858 FAM98CQ17RN3 349 aaKnown RBP11.87□□□□□ -0.51
SCAMP1-202ENST00000506858 SMG6Q86US8 1419 aaKnown RBP11.87□□□□□ -0.51
SCAMP1-202ENST00000506858 RTL1A6NKG5 1358 aa11.87□□□□□ -0.51
SCAMP1-202ENST00000506858 ZNF772Q68DY9 489 aaPredicted RBP11.86□□□□□ -0.51
SCAMP1-202ENST00000506858 GJD4Q96KN9 370 aaPredicted RBP11.86□□□□□ -0.51
SCAMP1-202ENST00000506858 CFAP53Q96M91 514 aa11.86□□□□□ -0.51
SCAMP1-202ENST00000506858 TRPC5Q9UL62 973 aaPredicted RBP11.86□□□□□ -0.51
SCAMP1-202ENST00000506858 SPATA31A1Q5TZJ5 1347 aa11.86□□□□□ -0.51
SCAMP1-202ENST00000506858 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
SCAMP1-202ENST00000506858 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
SCAMP1-202ENST00000506858 BLMP54132 1417 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms