RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 C6orf229H3BNL8 230 aa7.43□□□□□ -1.22
TOPBP1-205ENST00000506779 ZFP64Q9NPA5 681 aa7.43□□□□□ -1.22
TOPBP1-205ENST00000506779 TSHZ2Q9NRE2 1034 aa7.43□□□□□ -1.22
TOPBP1-205ENST00000506779 FSHRP23945 695 aa7.42□□□□□ -1.22
TOPBP1-205ENST00000506779 CTSOP43234 321 aaPredicted RBP7.42□□□□□ -1.22
TOPBP1-205ENST00000506779 C4orf48Q5BLP8 95 aa7.42□□□□□ -1.22
TOPBP1-205ENST00000506779 ARTNQ5T4W7 220 aa7.42□□□□□ -1.22
TOPBP1-205ENST00000506779 MKL2Q9ULH7 1088 aa7.42□□□□□ -1.22
TOPBP1-205ENST00000506779 GPR37O15354 613 aa7.41□□□□□ -1.22
TOPBP1-205ENST00000506779 PCDHGC3Q9UN70 934 aa7.41□□□□□ -1.22
TOPBP1-205ENST00000506779 OIP5O43482 229 aa7.4□□□□□ -1.22
TOPBP1-205ENST00000506779 CBLBQ13191 982 aa7.4□□□□□ -1.22
TOPBP1-205ENST00000506779 Q6ZVU0 165 aa7.4□□□□□ -1.22
TOPBP1-205ENST00000506779 CD163Q86VB7 1156 aa7.4□□□□□ -1.22
TOPBP1-205ENST00000506779 KCNV2Q8TDN2 545 aa7.4□□□□□ -1.22
TOPBP1-205ENST00000506779 KRTAP4-9Q9BYQ8 210 aa7.4□□□□□ -1.22
TOPBP1-205ENST00000506779 COBLO75128 1261 aa7.39□□□□□ -1.23
TOPBP1-205ENST00000506779 DOC2BQ14184 412 aa7.39□□□□□ -1.23
TOPBP1-205ENST00000506779 RBM26Q5T8P6 1007 aaKnown RBP7.39□□□□□ -1.23
TOPBP1-205ENST00000506779 NBPF11Q86T75 865 aa7.39□□□□□ -1.23
TOPBP1-205ENST00000506779 GPR25O00155 361 aa7.38□□□□□ -1.23
TOPBP1-205ENST00000506779 FDX1P10109 184 aa7.38□□□□□ -1.23
TOPBP1-205ENST00000506779 CTHP32929 405 aa7.38□□□□□ -1.23
TOPBP1-205ENST00000506779 GRIN2CQ14957 1233 aa7.38□□□□□ -1.23
TOPBP1-205ENST00000506779 AGERQ15109 404 aa7.38□□□□□ -1.23
TOPBP1-205ENST00000506779 CCDC116Q8IYX3 515 aa7.38□□□□□ -1.23
TOPBP1-205ENST00000506779 INSM2Q96T92 566 aaPredicted RBP7.37□□□□□ -1.23
TOPBP1-205ENST00000506779 SEMA3EO15041 775 aa7.36□□□□□ -1.23
TOPBP1-205ENST00000506779 BPHLQ86WA6 291 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-205ENST00000506779 P3H3Q8IVL6 736 aa7.36□□□□□ -1.23
TOPBP1-205ENST00000506779 PRR7Q8TB68 274 aa7.36□□□□□ -1.23
TOPBP1-205ENST00000506779 RNF217Q8TC41 542 aa7.36□□□□□ -1.23
TOPBP1-205ENST00000506779 ZNF837Q96EG3 531 aaPredicted RBP7.36□□□□□ -1.23
TOPBP1-205ENST00000506779 KRTAP4-2Q9BYR5 136 aa7.36□□□□□ -1.23
TOPBP1-205ENST00000506779 CHRNA4P43681 627 aa7.35□□□□□ -1.23
TOPBP1-205ENST00000506779 DESI1Q6ICB0 168 aa7.35□□□□□ -1.23
TOPBP1-205ENST00000506779 FOXR1Q6PIV2 292 aa7.35□□□□□ -1.23
TOPBP1-205ENST00000506779 VASH1Q7L8A9 365 aaPredicted RBP7.35□□□□□ -1.23
TOPBP1-205ENST00000506779 MAP4K5Q9Y4K4 846 aa7.35□□□□□ -1.23
TOPBP1-205ENST00000506779 SUV39H2Q9H5I1 410 aa7.34□□□□□ -1.23
TOPBP1-205ENST00000506779 POLMQ9NP87 494 aaPredicted RBP7.34□□□□□ -1.23
TOPBP1-205ENST00000506779 SHISA8B8ZZ34 492 aa7.33□□□□□ -1.24
TOPBP1-205ENST00000506779 PPP1R26Q5T8A7 1209 aaPredicted RBP7.33□□□□□ -1.24
TOPBP1-205ENST00000506779 NUTM1Q86Y26 1132 aa7.33□□□□□ -1.24
TOPBP1-205ENST00000506779 TRIM22Q8IYM9 498 aa7.33□□□□□ -1.24
TOPBP1-205ENST00000506779 GMCL1Q96IK5 515 aa7.33□□□□□ -1.24
TOPBP1-205ENST00000506779 AGBL1Q96MI9 1066 aa7.33□□□□□ -1.24
TOPBP1-205ENST00000506779 C1QTNF2Q9BXJ5 285 aa7.33□□□□□ -1.24
TOPBP1-205ENST00000506779 RRAGCQ9HB90 399 aa7.32□□□□□ -1.24
TOPBP1-205ENST00000506779 PGPEP1Q9NXJ5 209 aa7.32□□□□□ -1.24
TOPBP1-205ENST00000506779 ARID1BQ8NFD5 2236 aaPredicted RBP7.32□□□□□ -1.24
TOPBP1-205ENST00000506779 RELBQ01201 579 aa7.31□□□□□ -1.24
TOPBP1-205ENST00000506779 MDM2Q00987 491 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-205ENST00000506779 LINC00114Q6XXX2 140 aa7.3□□□□□ -1.24
TOPBP1-205ENST00000506779 NSFL1CQ9UNZ2 370 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-205ENST00000506779 MX2P20592 715 aa7.29□□□□□ -1.24
TOPBP1-205ENST00000506779 DBN1Q16643 649 aa7.29□□□□□ -1.24
TOPBP1-205ENST00000506779 LYPD8Q6UX82 237 aa7.29□□□□□ -1.24
TOPBP1-205ENST00000506779 OXCT2Q9BYC2 517 aaPredicted RBP7.29□□□□□ -1.24
TOPBP1-205ENST00000506779 MAP10Q9P2G4 905 aa7.29□□□□□ -1.24
TOPBP1-205ENST00000506779 RSPO4Q2I0M5 234 aaPredicted RBP7.28□□□□□ -1.24
TOPBP1-205ENST00000506779 TRMT44Q8IYL2 757 aaKnown RBP7.28□□□□□ -1.24
TOPBP1-205ENST00000506779 GTPBP3Q969Y2 492 aaKnown RBP7.27□□□□□ -1.25
TOPBP1-205ENST00000506779 F12P00748 615 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-205ENST00000506779 HOXB4P17483 251 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-205ENST00000506779 PRPF38BQ5VTL8 546 aaKnown RBP7.26□□□□□ -1.25
TOPBP1-205ENST00000506779 FOXD4L5Q5VV16 416 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-205ENST00000506779 C1orf229Q6ZS94 237 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-205ENST00000506779 ZNF395Q9H8N7 513 aaPredicted RBP7.26□□□□□ -1.25
TOPBP1-205ENST00000506779 SPDYE5A6NIY4 337 aa7.25□□□□□ -1.25
TOPBP1-205ENST00000506779 YBX3P16989 372 aaKnown RBP eCLIP7.25□□□□□ -1.25
TOPBP1-205ENST00000506779 PLCB2Q00722 1185 aa7.25□□□□□ -1.25
TOPBP1-205ENST00000506779 LYSMD3Q7Z3D4 306 aa7.25□□□□□ -1.25
TOPBP1-205ENST00000506779 TRERF1Q96PN7 1200 aa7.25□□□□□ -1.25
TOPBP1-205ENST00000506779 GATA4P43694 442 aa7.24□□□□□ -1.25
TOPBP1-205ENST00000506779 NKAPLQ5M9Q1 402 aa7.24□□□□□ -1.25
TOPBP1-205ENST00000506779 RIPOR1Q6ZS17 1223 aa7.24□□□□□ -1.25
TOPBP1-205ENST00000506779 GNB5O14775 395 aa7.23□□□□□ -1.25
TOPBP1-205ENST00000506779 MAP2K3P46734 347 aa7.23□□□□□ -1.25
TOPBP1-205ENST00000506779 MTMR2Q13614 643 aa7.23□□□□□ -1.25
TOPBP1-205ENST00000506779 PIK3R2O00459 728 aa7.22□□□□□ -1.25
TOPBP1-205ENST00000506779 NDUFV2P19404 249 aa7.22□□□□□ -1.25
TOPBP1-205ENST00000506779 EDARADDQ8WWZ3 215 aa7.22□□□□□ -1.25
TOPBP1-205ENST00000506779 RHOQP17081 205 aa7.21□□□□□ -1.26
TOPBP1-205ENST00000506779 SMYD5Q6GMV2 418 aa7.21□□□□□ -1.26
TOPBP1-205ENST00000506779 FAM217BQ9NTX9 383 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-205ENST00000506779 H7C1W4 665 aa7.2□□□□□ -1.26
TOPBP1-205ENST00000506779 TXKP42681 527 aa7.2□□□□□ -1.26
TOPBP1-205ENST00000506779 HAP1P54257 671 aaPredicted RBP7.2□□□□□ -1.26
TOPBP1-205ENST00000506779 LRP8Q14114 963 aa7.2□□□□□ -1.26
TOPBP1-205ENST00000506779 MCTP1Q6DN14 999 aa7.2□□□□□ -1.26
TOPBP1-205ENST00000506779 MAGEB6P1A0A0J9YX57 407 aa7.19□□□□□ -1.26
TOPBP1-205ENST00000506779 TESPA1A2RU30 521 aaPredicted RBP7.19□□□□□ -1.26
TOPBP1-205ENST00000506779 DYRK3O43781 588 aa7.19□□□□□ -1.26
TOPBP1-205ENST00000506779 SH3BP5LQ7L8J4 393 aa7.19□□□□□ -1.26
TOPBP1-205ENST00000506779 PRICKLE2Q7Z3G6 844 aa7.19□□□□□ -1.26
TOPBP1-205ENST00000506779 NOP53Q9NZM5 478 aaKnown RBP7.19□□□□□ -1.26
TOPBP1-205ENST00000506779 AMPD1P23109 780 aa7.18□□□□□ -1.26
TOPBP1-205ENST00000506779 KLRG1Q96E93 195 aa7.18□□□□□ -1.26
TOPBP1-205ENST00000506779 GDF2Q9UK05 429 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms