RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 SPATA31A7Q8IWB4 1347 aa20.34■□□□□ 0.85
DSP-203ENST00000506617 ABCC6O95255 1503 aa20.34■□□□□ 0.85
DSP-203ENST00000506617 CARD14Q9BXL6 1004 aa20.33■□□□□ 0.85
DSP-203ENST00000506617 THSD7AQ9UPZ6 1657 aa20.32■□□□□ 0.84
DSP-203ENST00000506617 COG3Q96JB2 828 aa20.32■□□□□ 0.84
DSP-203ENST00000506617 FYB1O15117 783 aa20.31■□□□□ 0.84
DSP-203ENST00000506617 EVA1CP58658 441 aa20.31■□□□□ 0.84
DSP-203ENST00000506617 GGNBP2Q9H3C7 697 aa20.31■□□□□ 0.84
DSP-203ENST00000506617 PANK3Q9H999 370 aa20.31■□□□□ 0.84
DSP-203ENST00000506617 ANKRD26Q9UPS8 1709 aa20.3■□□□□ 0.84
DSP-203ENST00000506617 SPATA31A1Q5TZJ5 1347 aa20.3■□□□□ 0.84
DSP-203ENST00000506617 LARP1Q6PKG0 1096 aaKnown RBP20.3■□□□□ 0.84
DSP-203ENST00000506617 AXIN2Q9Y2T1 843 aa20.3■□□□□ 0.84
DSP-203ENST00000506617 FAM98CQ17RN3 349 aaKnown RBP20.29■□□□□ 0.84
DSP-203ENST00000506617 SEPT12Q8IYM1 358 aa20.29■□□□□ 0.84
DSP-203ENST00000506617 WNK3Q9BYP7 1800 aa20.29■□□□□ 0.84
DSP-203ENST00000506617 CRB1P82279 1406 aa20.27■□□□□ 0.84
DSP-203ENST00000506617 A0A0G2JS52 829 aa20.27■□□□□ 0.84
DSP-203ENST00000506617 PER1O15534 1290 aaPredicted RBP20.27■□□□□ 0.84
DSP-203ENST00000506617 ONECUT3O60422 494 aaPredicted RBP20.27■□□□□ 0.84
DSP-203ENST00000506617 MYT1Q01538 1121 aa20.27■□□□□ 0.84
DSP-203ENST00000506617 USP35Q9P2H5 1018 aa20.27■□□□□ 0.84
DSP-203ENST00000506617 WDR17Q8IZU2 1322 aa20.25■□□□□ 0.83
DSP-203ENST00000506617 NPC1L1Q9UHC9 1359 aa20.24■□□□□ 0.83
DSP-203ENST00000506617 FBLN1P23142 703 aa20.24■□□□□ 0.83
DSP-203ENST00000506617 KNSTRNQ9Y448 316 aa20.24■□□□□ 0.83
DSP-203ENST00000506617 CGNL1Q0VF96 1302 aa20.24■□□□□ 0.83
DSP-203ENST00000506617 PARP4Q9UKK3 1724 aaKnown RBP20.23■□□□□ 0.83
DSP-203ENST00000506617 MAP3K19Q56UN5 1328 aa20.23■□□□□ 0.83
DSP-203ENST00000506617 NSD2O96028 1365 aa20.22■□□□□ 0.83
DSP-203ENST00000506617 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
DSP-203ENST00000506617 BLMP54132 1417 aaPredicted RBP20.22■□□□□ 0.83
DSP-203ENST00000506617 TOM1L2Q6ZVM7 507 aa20.22■□□□□ 0.83
DSP-203ENST00000506617 TCP11L2Q8N4U5 519 aa20.22■□□□□ 0.83
DSP-203ENST00000506617 UPF1Q92900 1129 aaKnown RBP eCLIP20.22■□□□□ 0.83
DSP-203ENST00000506617 FAM208AQ9UK61 1670 aaKnown RBP20.22■□□□□ 0.83
DSP-203ENST00000506617 CSB-PGBD3P0DP91 1061 aa20.21■□□□□ 0.83
DSP-203ENST00000506617 BARGINQ6ZT62 677 aa20.21■□□□□ 0.83
DSP-203ENST00000506617 ERBB3P21860 1342 aa20.21■□□□□ 0.83
DSP-203ENST00000506617 MAP2P11137 1827 aaKnown RBP20.2■□□□□ 0.82
DSP-203ENST00000506617 LRRC37A3O60309 1634 aa20.2■□□□□ 0.82
DSP-203ENST00000506617 DDX10Q13206 875 aaKnown RBP20.2■□□□□ 0.82
DSP-203ENST00000506617 RRS1Q15050 365 aaKnown RBP20.2■□□□□ 0.82
DSP-203ENST00000506617 KRT27Q7Z3Y8 459 aa20.2■□□□□ 0.82
DSP-203ENST00000506617 THRAP3Q9Y2W1 955 aaKnown RBP20.2■□□□□ 0.82
DSP-203ENST00000506617 RTL1A6NKG5 1358 aa20.2■□□□□ 0.82
DSP-203ENST00000506617 RGPD2P0DJD1 1756 aa20.19■□□□□ 0.82
DSP-203ENST00000506617 AMER1Q5JTC6 1135 aaPredicted RBP20.19■□□□□ 0.82
DSP-203ENST00000506617 IP6K1Q92551 441 aa20.19■□□□□ 0.82
DSP-203ENST00000506617 HOXC9P31274 260 aa20.18■□□□□ 0.82
DSP-203ENST00000506617 ANKRD24Q8TF21 1146 aa20.18■□□□□ 0.82
DSP-203ENST00000506617 EP400Q96L91 3159 aa20.18■□□□□ 0.82
DSP-203ENST00000506617 AMPHP49418 695 aa20.17■□□□□ 0.82
DSP-203ENST00000506617 CARD10Q9BWT7 1032 aa20.17■□□□□ 0.82
DSP-203ENST00000506617 DISP2A7MBM2 1401 aa20.14■□□□□ 0.81
DSP-203ENST00000506617 LTV1Q96GA3 475 aaPredicted RBP20.14■□□□□ 0.81
DSP-203ENST00000506617 FLT4P35916 1363 aa20.13■□□□□ 0.81
DSP-203ENST00000506617 NLRP2Q9NX02 1062 aa20.13■□□□□ 0.81
DSP-203ENST00000506617 EMILIN1Q9Y6C2 1016 aa20.13■□□□□ 0.81
DSP-203ENST00000506617 KIF24Q5T7B8 1368 aa20.12■□□□□ 0.81
DSP-203ENST00000506617 FAM182BQ5T319 152 aa20.12■□□□□ 0.81
DSP-203ENST00000506617 RGPD1P0DJD0 1748 aa20.1■□□□□ 0.81
DSP-203ENST00000506617 INSRP06213 1382 aa20.1■□□□□ 0.81
DSP-203ENST00000506617 TNNT2P45379 298 aaPredicted RBP20.1■□□□□ 0.81
DSP-203ENST00000506617 SMG6Q86US8 1419 aaKnown RBP20.1■□□□□ 0.81
DSP-203ENST00000506617 PDE3BQ13370 1112 aa20.09■□□□□ 0.81
DSP-203ENST00000506617 CDCA7Q9BWT1 371 aaPredicted RBP20.09■□□□□ 0.81
DSP-203ENST00000506617 TNS1Q9HBL0 1735 aaKnown RBP20.09■□□□□ 0.81
DSP-203ENST00000506617 HSP90AB2PQ58FF8 381 aa20.08■□□□□ 0.81
DSP-203ENST00000506617 TNS2Q63HR2 1409 aa20.08■□□□□ 0.8
DSP-203ENST00000506617 PPM1GO15355 546 aaPredicted RBP20.07■□□□□ 0.8
DSP-203ENST00000506617 DDB1Q16531 1140 aa20.07■□□□□ 0.8
DSP-203ENST00000506617 MORC1Q86VD1 984 aa20.07■□□□□ 0.8
DSP-203ENST00000506617 POLKQ9UBT6 870 aa20.07■□□□□ 0.8
DSP-203ENST00000506617 SBF2Q86WG5 1849 aa20.06■□□□□ 0.8
DSP-203ENST00000506617 RALBP1Q15311 655 aa20.05■□□□□ 0.8
DSP-203ENST00000506617 OVOS2A0A0G2JMS6 1433 aa20.04■□□□□ 0.8
DSP-203ENST00000506617 IL2RBP14784 551 aa20.04■□□□□ 0.8
DSP-203ENST00000506617 CCDC125Q86Z20 511 aa20.04■□□□□ 0.8
DSP-203ENST00000506617 SHANK3Q9BYB0 1731 aa20.03■□□□□ 0.8
DSP-203ENST00000506617 CC2D1BQ5T0F9 858 aaKnown RBP20.03■□□□□ 0.8
DSP-203ENST00000506617 FAM196AQ6ZSG2 479 aa20.03■□□□□ 0.8
DSP-203ENST00000506617 PARD3Q8TEW0 1356 aa20.03■□□□□ 0.8
DSP-203ENST00000506617 NBPF6Q5VWK0 638 aa20.02■□□□□ 0.8
DSP-203ENST00000506617 USHBP1Q8N6Y0 703 aa20.02■□□□□ 0.8
DSP-203ENST00000506617 NBPF4Q96M43 638 aa20.02■□□□□ 0.8
DSP-203ENST00000506617 MEGF6O75095 1541 aa20.02■□□□□ 0.79
DSP-203ENST00000506617 EXOC5O00471 708 aa20.01■□□□□ 0.79
DSP-203ENST00000506617 SF3B2Q13435 895 aaKnown RBP20■□□□□ 0.79
DSP-203ENST00000506617 MARCH10Q8NA82 808 aaPredicted RBP20■□□□□ 0.79
DSP-203ENST00000506617 CNGB1Q14028 1251 aaPredicted RBP19.99■□□□□ 0.79
DSP-203ENST00000506617 NCAPD2Q15021 1401 aa19.99■□□□□ 0.79
DSP-203ENST00000506617 TRIM37O94972 964 aa19.98■□□□□ 0.79
DSP-203ENST00000506617 DEFB132Q7Z7B7 95 aa19.98■□□□□ 0.79
DSP-203ENST00000506617 PRKRIP1Q9H875 184 aaPredicted RBP19.98■□□□□ 0.79
DSP-203ENST00000506617 BCL9O00512 1426 aa19.96■□□□□ 0.79
DSP-203ENST00000506617 EIF4A2Q14240 407 aaKnown RBP19.96■□□□□ 0.79
DSP-203ENST00000506617 PKD1L3Q7Z443 1732 aa19.96■□□□□ 0.79
DSP-203ENST00000506617 KAT6BQ8WYB5 2073 aa19.95■□□□□ 0.78
DSP-203ENST00000506617 NHSQ6T4R5 1651 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms