RNA–Protein interactions for RNA: ENST00000506510.6

PDE4D-215, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-215ENST00000506510 CDV3Q9UKY7 258 aaKnown RBP10.15□□□□□ -0.78
PDE4D-215ENST00000506510 NBPF20Q3BBV1 942 aa10.14□□□□□ -0.79
PDE4D-215ENST00000506510 PCDHB9Q9Y5E1 797 aa10.14□□□□□ -0.79
PDE4D-215ENST00000506510 ZIC2O95409 532 aaPredicted RBP10.13□□□□□ -0.79
PDE4D-215ENST00000506510 BMP1P13497 986 aa10.13□□□□□ -0.79
PDE4D-215ENST00000506510 ABL2P42684 1182 aa10.13□□□□□ -0.79
PDE4D-215ENST00000506510 RAB15P59190 212 aa10.13□□□□□ -0.79
PDE4D-215ENST00000506510 INTS6LQ5JSJ4 861 aaKnown RBP10.13□□□□□ -0.79
PDE4D-215ENST00000506510 CCDC116Q8IYX3 515 aa10.13□□□□□ -0.79
PDE4D-215ENST00000506510 ITPKCQ96DU7 683 aa10.13□□□□□ -0.79
PDE4D-215ENST00000506510 KLF16Q9BXK1 252 aaPredicted RBP10.13□□□□□ -0.79
PDE4D-215ENST00000506510 ZFAND3Q9H8U3 227 aa10.13□□□□□ -0.79
PDE4D-215ENST00000506510 IRF5Q13568 498 aa10.12□□□□□ -0.79
PDE4D-215ENST00000506510 ATP13A2Q9NQ11 1180 aa10.12□□□□□ -0.79
PDE4D-215ENST00000506510 POTECB2RU33 542 aa10.11□□□□□ -0.79
PDE4D-215ENST00000506510 GMPR2Q9P2T1 348 aaKnown RBP10.11□□□□□ -0.79
PDE4D-215ENST00000506510 FLIIQ13045 1269 aa10.1□□□□□ -0.79
PDE4D-215ENST00000506510 PPP1R26Q5T8A7 1209 aaPredicted RBP10.1□□□□□ -0.79
PDE4D-215ENST00000506510 ZNF787Q6DD87 383 aa10.1□□□□□ -0.79
PDE4D-215ENST00000506510 POM121Q96HA1 1249 aa10.1□□□□□ -0.79
PDE4D-215ENST00000506510 COG6Q9Y2V7 657 aa10.1□□□□□ -0.79
PDE4D-215ENST00000506510 ZNF330Q9Y3S2 320 aaPredicted RBP10.09□□□□□ -0.79
PDE4D-215ENST00000506510 EMILIN1Q9Y6C2 1016 aa10.09□□□□□ -0.79
PDE4D-215ENST00000506510 VAC14Q08AM6 782 aa10.08□□□□□ -0.8
PDE4D-215ENST00000506510 TRIM46Q7Z4K8 759 aa10.08□□□□□ -0.8
PDE4D-215ENST00000506510 GIGYF1O75420 1035 aaPredicted RBP10.07□□□□□ -0.8
PDE4D-215ENST00000506510 UBTFP17480 764 aaKnown RBP10.07□□□□□ -0.8
PDE4D-215ENST00000506510 DHX9Q08211 1270 aaKnown RBP10.07□□□□□ -0.8
PDE4D-215ENST00000506510 ESPNB1AK53 854 aa10.06□□□□□ -0.8
PDE4D-215ENST00000506510 TMPRSS4Q9NRS4 437 aa10.06□□□□□ -0.8
PDE4D-215ENST00000506510 PGPEP1Q9NXJ5 209 aa10.06□□□□□ -0.8
PDE4D-215ENST00000506510 ERVH48-1M5A8F1 160 aa10.05□□□□□ -0.8
PDE4D-215ENST00000506510 MRPL14Q6P1L8 145 aaKnown RBP10.05□□□□□ -0.8
PDE4D-215ENST00000506510 CBLBQ13191 982 aa10.04□□□□□ -0.8
PDE4D-215ENST00000506510 MEIOBQ8N635 442 aa10.04□□□□□ -0.8
PDE4D-215ENST00000506510 ZNF784Q8NCA9 323 aaPredicted RBP10.04□□□□□ -0.8
PDE4D-215ENST00000506510 C11orf95C9JLR9 678 aaPredicted RBP10.03□□□□□ -0.8
PDE4D-215ENST00000506510 RAD21O60216 631 aa10.03□□□□□ -0.8
PDE4D-215ENST00000506510 SEPT12Q8IYM1 358 aa10.03□□□□□ -0.8
PDE4D-215ENST00000506510 PURBQ96QR8 312 aaKnown RBP10.03□□□□□ -0.8
PDE4D-215ENST00000506510 MCCD1P59942 119 aaPredicted RBP10.02□□□□□ -0.81
PDE4D-215ENST00000506510 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.81
PDE4D-215ENST00000506510 ZNF592Q92610 1267 aa10.02□□□□□ -0.81
PDE4D-215ENST00000506510 TRIM47Q96LD4 638 aa10.02□□□□□ -0.81
PDE4D-215ENST00000506510 ZFP42Q96MM3 310 aa10.02□□□□□ -0.81
PDE4D-215ENST00000506510 SENP2Q9HC62 589 aa10.02□□□□□ -0.81
PDE4D-215ENST00000506510 WASHC4Q2M389 1173 aa10.01□□□□□ -0.81
PDE4D-215ENST00000506510 C6orf118Q5T5N4 469 aa10.01□□□□□ -0.81
PDE4D-215ENST00000506510 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
PDE4D-215ENST00000506510 SNRPBP14678 240 aaKnown RBP10□□□□□ -0.81
PDE4D-215ENST00000506510 SCARF1Q14162 830 aa10□□□□□ -0.81
PDE4D-215ENST00000506510 CYLDQ9NQC7 956 aa10□□□□□ -0.81
PDE4D-215ENST00000506510 Q6ZVU0 165 aa9.99□□□□□ -0.81
PDE4D-215ENST00000506510 KIFC2Q96AC6 838 aa9.99□□□□□ -0.81
PDE4D-215ENST00000506510 CLUAP1Q96AJ1 413 aa9.99□□□□□ -0.81
PDE4D-215ENST00000506510 CEP126Q9P2H0 1117 aa9.99□□□□□ -0.81
PDE4D-215ENST00000506510 LILRA1O75019 489 aa9.98□□□□□ -0.81
PDE4D-215ENST00000506510 UPP2O95045 317 aa9.98□□□□□ -0.81
PDE4D-215ENST00000506510 BMP2P12643 396 aa9.98□□□□□ -0.81
PDE4D-215ENST00000506510 RNF20Q5VTR2 975 aa9.98□□□□□ -0.81
PDE4D-215ENST00000506510 WWC1Q8IX03 1113 aa9.98□□□□□ -0.81
PDE4D-215ENST00000506510 AGBL1Q96MI9 1066 aa9.97□□□□□ -0.81
PDE4D-215ENST00000506510 PCDHB11Q9Y5F2 797 aa9.97□□□□□ -0.81
PDE4D-215ENST00000506510 ADD1P35611 737 aaKnown RBP9.96□□□□□ -0.82
PDE4D-215ENST00000506510 TSEN34Q9BSV6 310 aaKnown RBP9.96□□□□□ -0.82
PDE4D-215ENST00000506510 RELBQ01201 579 aa9.95□□□□□ -0.82
PDE4D-215ENST00000506510 SEMA3FQ13275 785 aa9.95□□□□□ -0.82
PDE4D-215ENST00000506510 POM121CA8CG34 1229 aa9.94□□□□□ -0.82
PDE4D-215ENST00000506510 ADH1AP07327 375 aa9.94□□□□□ -0.82
PDE4D-215ENST00000506510 SCTRP47872 440 aa9.94□□□□□ -0.82
PDE4D-215ENST00000506510 CCDC85AQ96PX6 553 aaPredicted RBP9.94□□□□□ -0.82
PDE4D-215ENST00000506510 SOBPA7XYQ1 873 aa9.93□□□□□ -0.82
PDE4D-215ENST00000506510 SOX11P35716 441 aa9.93□□□□□ -0.82
PDE4D-215ENST00000506510 ERVK-9P63128 1117 aa9.93□□□□□ -0.82
PDE4D-215ENST00000506510 SLFNL1Q499Z3 407 aa9.93□□□□□ -0.82
PDE4D-215ENST00000506510 CC2D2BQ6DHV5 1058 aa9.93□□□□□ -0.82
PDE4D-215ENST00000506510 CCDC125Q86Z20 511 aa9.93□□□□□ -0.82
PDE4D-215ENST00000506510 PROSER2Q86WR7 435 aaPredicted RBP9.92□□□□□ -0.82
PDE4D-215ENST00000506510 RNF135Q8IUD6 432 aa9.92□□□□□ -0.82
PDE4D-215ENST00000506510 ZNF775Q96BV0 537 aaPredicted RBP9.92□□□□□ -0.82
PDE4D-215ENST00000506510 CDCA7Q9BWT1 371 aaPredicted RBP9.92□□□□□ -0.82
PDE4D-215ENST00000506510 ZNF395Q9H8N7 513 aaPredicted RBP9.92□□□□□ -0.82
PDE4D-215ENST00000506510 TSGA10IPQ3SY00 556 aa9.91□□□□□ -0.82
PDE4D-215ENST00000506510 PHTF2Q8N3S3 785 aa9.91□□□□□ -0.82
PDE4D-215ENST00000506510 KDF1Q8NAX2 398 aaPredicted RBP9.91□□□□□ -0.82
PDE4D-215ENST00000506510 SPINT1O43278 529 aa9.9□□□□□ -0.82
PDE4D-215ENST00000506510 TRIM52Q96A61 297 aa9.9□□□□□ -0.82
PDE4D-215ENST00000506510 DOLKQ9UPQ8 538 aa9.9□□□□□ -0.82
PDE4D-215ENST00000506510 SOS2Q07890 1332 aaPredicted RBP9.89□□□□□ -0.83
PDE4D-215ENST00000506510 PIK3CDO00329 1044 aa9.89□□□□□ -0.83
PDE4D-215ENST00000506510 ADAMTS19Q8TE59 1207 aa9.89□□□□□ -0.83
PDE4D-215ENST00000506510 INSM2Q96T92 566 aaPredicted RBP9.89□□□□□ -0.83
PDE4D-215ENST00000506510 ALG2Q9H553 416 aa9.89□□□□□ -0.83
PDE4D-215ENST00000506510 ATP5J2-PTCD1G3V325 749 aa9.88□□□□□ -0.83
PDE4D-215ENST00000506510 MAN1A2O60476 641 aa9.88□□□□□ -0.83
PDE4D-215ENST00000506510 FNBP4Q8N3X1 1017 aaPredicted RBP9.88□□□□□ -0.83
PDE4D-215ENST00000506510 OSBPL3Q9H4L5 887 aa9.88□□□□□ -0.83
PDE4D-215ENST00000506510 POLMQ9NP87 494 aaPredicted RBP9.88□□□□□ -0.83
PDE4D-215ENST00000506510 DNMT3LQ9UJW3 386 aa9.88□□□□□ -0.83
PDE4D-215ENST00000506510 TTLL8A6PVC2 850 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms