RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 SYNRGQ9UMZ2 1314 aa11.1□□□□□ -0.63
HTT-203ENST00000506137 KDM5BQ9UGL1 1544 aa11.1□□□□□ -0.63
HTT-203ENST00000506137 TLDC2A0PJX2 215 aa11.1□□□□□ -0.63
HTT-203ENST00000506137 PLEKHG3A1L390 1219 aa11.1□□□□□ -0.63
HTT-203ENST00000506137 SEMA3EO15041 775 aa11.1□□□□□ -0.63
HTT-203ENST00000506137 MAP2K1Q02750 393 aaPredicted RBP11.1□□□□□ -0.63
HTT-203ENST00000506137 ATP1B4Q9UN42 357 aaPredicted RBP11.1□□□□□ -0.63
HTT-203ENST00000506137 WDR7Q9Y4E6 1490 aa11.09□□□□□ -0.63
HTT-203ENST00000506137 MAN1A1P33908 653 aa11.09□□□□□ -0.63
HTT-203ENST00000506137 PSME1Q06323 249 aa11.09□□□□□ -0.63
HTT-203ENST00000506137 SF3B2Q13435 895 aaKnown RBP11.09□□□□□ -0.63
HTT-203ENST00000506137 CDC37Q16543 378 aaPredicted RBP11.09□□□□□ -0.63
HTT-203ENST00000506137 CREBRFQ8IUR6 639 aa11.09□□□□□ -0.63
HTT-203ENST00000506137 IRF2BPLQ9H1B7 796 aa11.09□□□□□ -0.63
HTT-203ENST00000506137 LRP5O75197 1615 aa11.09□□□□□ -0.63
HTT-203ENST00000506137 ZCCHC11Q5TAX3 1644 aaKnown RBP11.09□□□□□ -0.63
HTT-203ENST00000506137 PSMC1P62191 440 aaKnown RBP11.08□□□□□ -0.64
HTT-203ENST00000506137 HDLBPQ00341 1268 aaKnown RBP11.08□□□□□ -0.64
HTT-203ENST00000506137 SLC20A2Q08357 652 aa11.08□□□□□ -0.64
HTT-203ENST00000506137 BIRC2Q13490 618 aa11.08□□□□□ -0.64
HTT-203ENST00000506137 C11orf96Q7Z7L8 435 aa11.08□□□□□ -0.64
HTT-203ENST00000506137 RPAINQ86UA6 219 aa11.08□□□□□ -0.64
HTT-203ENST00000506137 RSPH9Q9H1X1 276 aaPredicted RBP11.08□□□□□ -0.64
HTT-203ENST00000506137 GEMIN8Q9NWZ8 242 aaKnown RBP11.08□□□□□ -0.64
HTT-203ENST00000506137 CUX1P39880 1505 aa11.08□□□□□ -0.64
HTT-203ENST00000506137 PHLDB1Q86UU1 1377 aa11.07□□□□□ -0.64
HTT-203ENST00000506137 CFAP69A5D8W1 941 aa11.07□□□□□ -0.64
HTT-203ENST00000506137 VAMP1P23763 118 aa11.07□□□□□ -0.64
HTT-203ENST00000506137 MKRN4PQ13434 485 aaPredicted RBP11.07□□□□□ -0.64
HTT-203ENST00000506137 UVSSAQ2YD98 709 aa11.07□□□□□ -0.64
HTT-203ENST00000506137 GPATCH3Q96I76 525 aa11.07□□□□□ -0.64
HTT-203ENST00000506137 ZNF830Q96NB3 372 aaPredicted RBP11.07□□□□□ -0.64
HTT-203ENST00000506137 NAP1L4Q99733 375 aaKnown RBP11.07□□□□□ -0.64
HTT-203ENST00000506137 MRVI1Q9Y6F6 885 aa11.07□□□□□ -0.64
HTT-203ENST00000506137 ZNF16P17020 682 aaPredicted RBP11.06□□□□□ -0.64
HTT-203ENST00000506137 CCDC146Q8IYE0 955 aa11.06□□□□□ -0.64
HTT-203ENST00000506137 TMX4Q9H1E5 349 aaPredicted RBP11.06□□□□□ -0.64
HTT-203ENST00000506137 CUEDC1Q9NWM3 386 aaPredicted RBP11.06□□□□□ -0.64
HTT-203ENST00000506137 SCINQ9Y6U3 715 aa11.06□□□□□ -0.64
HTT-203ENST00000506137 ALKQ9UM73 1620 aa11.06□□□□□ -0.64
HTT-203ENST00000506137 HSP90AB1P08238 724 aaKnown RBP11.05□□□□□ -0.64
HTT-203ENST00000506137 PCMTD1Q96MG8 357 aaPredicted RBP11.05□□□□□ -0.64
HTT-203ENST00000506137 PAIP2Q9BPZ3 127 aaKnown RBP11.05□□□□□ -0.64
HTT-203ENST00000506137 RAPGEF3O95398 923 aa11.04□□□□□ -0.64
HTT-203ENST00000506137 SKIV2LQ15477 1246 aaKnown RBP11.04□□□□□ -0.64
HTT-203ENST00000506137 EGFLAMQ63HQ2 1017 aa11.04□□□□□ -0.64
HTT-203ENST00000506137 VTI1AQ96AJ9 217 aa11.04□□□□□ -0.64
HTT-203ENST00000506137 CCDC88BA6NC98 1476 aa11.04□□□□□ -0.64
HTT-203ENST00000506137 CPS1P31327 1500 aa11.04□□□□□ -0.64
HTT-203ENST00000506137 PBXIP1Q96AQ6 731 aa11.03□□□□□ -0.64
HTT-203ENST00000506137 QTRT2Q9H974 415 aaKnown RBP11.03□□□□□ -0.64
HTT-203ENST00000506137 TMEM51Q9NW97 253 aa11.03□□□□□ -0.64
HTT-203ENST00000506137 ZNF330Q9Y3S2 320 aaPredicted RBP11.03□□□□□ -0.64
HTT-203ENST00000506137 FRMPD1Q5SYB0 1578 aa11.03□□□□□ -0.64
HTT-203ENST00000506137 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.65
HTT-203ENST00000506137 CCDC174Q6PII3 467 aa11.02□□□□□ -0.65
HTT-203ENST00000506137 PDILTQ8N807 584 aa11.02□□□□□ -0.65
HTT-203ENST00000506137 TRIM52Q96A61 297 aa11.02□□□□□ -0.65
HTT-203ENST00000506137 CEP63Q96MT8 703 aa11.02□□□□□ -0.65
HTT-203ENST00000506137 FAM210AQ96ND0 272 aa11.02□□□□□ -0.65
HTT-203ENST00000506137 PAGR1Q9BTK6 254 aa11.02□□□□□ -0.65
HTT-203ENST00000506137 TRIM34Q9BYJ4 488 aa11.02□□□□□ -0.65
HTT-203ENST00000506137 GNEQ9Y223 722 aaKnown RBP11.02□□□□□ -0.65
HTT-203ENST00000506137 UACAQ9BZF9 1416 aa11.01□□□□□ -0.65
HTT-203ENST00000506137 HOXA2O43364 376 aa11.01□□□□□ -0.65
HTT-203ENST00000506137 TBC1D12O60347 775 aa11.01□□□□□ -0.65
HTT-203ENST00000506137 HSP90B2PQ58FF3 399 aa11.01□□□□□ -0.65
HTT-203ENST00000506137 HDGFL1Q5TGJ6 251 aa11.01□□□□□ -0.65
HTT-203ENST00000506137 NRBP1Q9UHY1 535 aa11.01□□□□□ -0.65
HTT-203ENST00000506137 CEP350Q5VT06 3117 aa11.01□□□□□ -0.65
HTT-203ENST00000506137 TNIKQ9UKE5 1360 aa11.01□□□□□ -0.65
HTT-203ENST00000506137 CAMSAP1Q5T5Y3 1602 aa11□□□□□ -0.65
HTT-203ENST00000506137 RAPGEF6Q8TEU7 1601 aa11□□□□□ -0.65
HTT-203ENST00000506137 NEFHP12036 1026 aa11□□□□□ -0.65
HTT-203ENST00000506137 SDE2Q6IQ49 451 aa11□□□□□ -0.65
HTT-203ENST00000506137 BCL2L13Q9BXK5 485 aa11□□□□□ -0.65
HTT-203ENST00000506137 INO80BQ9C086 356 aaPredicted RBP11□□□□□ -0.65
HTT-203ENST00000506137 ANAPC4Q9UJX5 808 aa11□□□□□ -0.65
HTT-203ENST00000506137 STK24Q9Y6E0 443 aa11□□□□□ -0.65
HTT-203ENST00000506137 ERBB3P21860 1342 aa11□□□□□ -0.65
HTT-203ENST00000506137 SIGLEC1Q9BZZ2 1709 aa11□□□□□ -0.65
HTT-203ENST00000506137 ARHGEF12Q9NZN5 1544 aa10.99□□□□□ -0.65
HTT-203ENST00000506137 HMMRO75330 724 aa10.99□□□□□ -0.65
HTT-203ENST00000506137 SATB1Q01826 763 aa10.99□□□□□ -0.65
HTT-203ENST00000506137 NEXNQ0ZGT2 675 aa10.99□□□□□ -0.65
HTT-203ENST00000506137 DRC7Q8IY82 874 aa10.99□□□□□ -0.65
HTT-203ENST00000506137 C1orf131Q8NDD1 294 aaKnown RBP10.99□□□□□ -0.65
HTT-203ENST00000506137 ATL2Q8NHH9 583 aa10.99□□□□□ -0.65
HTT-203ENST00000506137 SPACA7Q96KW9 195 aa10.99□□□□□ -0.65
HTT-203ENST00000506137 RPS6KC1Q96S38 1066 aa10.99□□□□□ -0.65
HTT-203ENST00000506137 PDZRN3Q9UPQ7 1066 aa10.99□□□□□ -0.65
HTT-203ENST00000506137 FANCIQ9NVI1 1328 aa10.99□□□□□ -0.65
HTT-203ENST00000506137 MLECQ14165 292 aa10.98□□□□□ -0.65
HTT-203ENST00000506137 UTP14CQ5TAP6 766 aaKnown RBP10.98□□□□□ -0.65
HTT-203ENST00000506137 MYCBPQ99417 103 aaPredicted RBP10.98□□□□□ -0.65
HTT-203ENST00000506137 IFT122Q9HBG6 1241 aa10.98□□□□□ -0.65
HTT-203ENST00000506137 AKNAQ7Z591 1439 aa10.98□□□□□ -0.65
HTT-203ENST00000506137 ERICH3Q5RHP9 1530 aa10.98□□□□□ -0.65
HTT-203ENST00000506137 CCDC189A1A4V9 331 aa10.97□□□□□ -0.65
HTT-203ENST00000506137 SPDYE2BA6NHP3 402 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms