RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 EMILIN1Q9Y6C2 1016 aa13.34□□□□□ -0.27
TRIM6-208ENST00000506134 AATKQ6ZMQ8 1374 aa13.34□□□□□ -0.27
TRIM6-208ENST00000506134 AMPHP49418 695 aa13.33□□□□□ -0.27
TRIM6-208ENST00000506134 MAP2P11137 1827 aaKnown RBP13.33□□□□□ -0.28
TRIM6-208ENST00000506134 PARD3Q8TEW0 1356 aa13.33□□□□□ -0.28
TRIM6-208ENST00000506134 PPP2R1AP30153 589 aa13.32□□□□□ -0.28
TRIM6-208ENST00000506134 MTHFSP49914 203 aa13.32□□□□□ -0.28
TRIM6-208ENST00000506134 RALBP1Q15311 655 aa13.32□□□□□ -0.28
TRIM6-208ENST00000506134 IP6K1Q92551 441 aa13.32□□□□□ -0.28
TRIM6-208ENST00000506134 PRKRIP1Q9H875 184 aaPredicted RBP13.32□□□□□ -0.28
TRIM6-208ENST00000506134 BTG4Q9NY30 223 aa13.32□□□□□ -0.28
TRIM6-208ENST00000506134 HOXC9P31274 260 aa13.32□□□□□ -0.28
TRIM6-208ENST00000506134 FNBP4Q8N3X1 1017 aaPredicted RBP13.32□□□□□ -0.28
TRIM6-208ENST00000506134 HSP90AB2PQ58FF8 381 aa13.31□□□□□ -0.28
TRIM6-208ENST00000506134 DIEXFQ68CQ4 756 aaKnown RBP13.31□□□□□ -0.28
TRIM6-208ENST00000506134 LTN1O94822 1766 aa13.3□□□□□ -0.28
TRIM6-208ENST00000506134 COL18A1P39060 1754 aa13.3□□□□□ -0.28
TRIM6-208ENST00000506134 CAMTA1Q9Y6Y1 1673 aa13.3□□□□□ -0.28
TRIM6-208ENST00000506134 ANP32CO43423 234 aa13.3□□□□□ -0.28
TRIM6-208ENST00000506134 EVA1CP58658 441 aa13.3□□□□□ -0.28
TRIM6-208ENST00000506134 LTV1Q96GA3 475 aaPredicted RBP13.3□□□□□ -0.28
TRIM6-208ENST00000506134 STRN4Q9NRL3 753 aa13.3□□□□□ -0.28
TRIM6-208ENST00000506134 USP21Q9UK80 565 aa13.3□□□□□ -0.28
TRIM6-208ENST00000506134 AFF2P51816 1311 aa13.3□□□□□ -0.28
TRIM6-208ENST00000506134 COL14A1Q05707 1796 aaKnown RBP13.29□□□□□ -0.28
TRIM6-208ENST00000506134 RGPD5Q99666 1765 aa13.29□□□□□ -0.28
TRIM6-208ENST00000506134 PEAK1Q9H792 1746 aa13.28□□□□□ -0.28
TRIM6-208ENST00000506134 SLIT2O94813 1529 aa13.28□□□□□ -0.28
TRIM6-208ENST00000506134 UNC5CLQ8IV45 518 aa13.28□□□□□ -0.28
TRIM6-208ENST00000506134 RGS17Q9UGC6 210 aaPredicted RBP13.28□□□□□ -0.28
TRIM6-208ENST00000506134 BCL9LQ86UU0 1499 aa13.27□□□□□ -0.28
TRIM6-208ENST00000506134 LMO7Q8WWI1 1683 aa13.27□□□□□ -0.29
TRIM6-208ENST00000506134 ANKRD24Q8TF21 1146 aa13.27□□□□□ -0.29
TRIM6-208ENST00000506134 FLT4P35916 1363 aa13.27□□□□□ -0.29
TRIM6-208ENST00000506134 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.29
TRIM6-208ENST00000506134 CSB-PGBD3P0DP91 1061 aa13.26□□□□□ -0.29
TRIM6-208ENST00000506134 LARP1Q6PKG0 1096 aaKnown RBP13.26□□□□□ -0.29
TRIM6-208ENST00000506134 MYBBP1AQ9BQG0 1328 aaKnown RBP13.26□□□□□ -0.29
TRIM6-208ENST00000506134 INSRP06213 1382 aa13.26□□□□□ -0.29
TRIM6-208ENST00000506134 PLCH1Q4KWH8 1693 aa13.26□□□□□ -0.29
TRIM6-208ENST00000506134 QTRT2Q9H974 415 aaKnown RBP13.25□□□□□ -0.29
TRIM6-208ENST00000506134 RTL1A6NKG5 1358 aa13.25□□□□□ -0.29
TRIM6-208ENST00000506134 SMG6Q86US8 1419 aaKnown RBP13.25□□□□□ -0.29
TRIM6-208ENST00000506134 COL5A2P05997 1499 aaPredicted RBP13.24□□□□□ -0.29
TRIM6-208ENST00000506134 ERBB3P21860 1342 aa13.24□□□□□ -0.29
TRIM6-208ENST00000506134 BLMP54132 1417 aaPredicted RBP13.24□□□□□ -0.29
TRIM6-208ENST00000506134 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
TRIM6-208ENST00000506134 EIF4A2Q14240 407 aaKnown RBP13.24□□□□□ -0.29
TRIM6-208ENST00000506134 ZNF772Q68DY9 489 aaPredicted RBP13.24□□□□□ -0.29
TRIM6-208ENST00000506134 WDR17Q8IZU2 1322 aa13.23□□□□□ -0.29
TRIM6-208ENST00000506134 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
TRIM6-208ENST00000506134 IL13P35225 146 aa13.23□□□□□ -0.29
TRIM6-208ENST00000506134 VPS72Q15906 364 aa13.23□□□□□ -0.29
TRIM6-208ENST00000506134 CCDC184Q52MB2 194 aa13.23□□□□□ -0.29
TRIM6-208ENST00000506134 NBPF6Q5VWK0 638 aa13.23□□□□□ -0.29
TRIM6-208ENST00000506134 TOM1L2Q6ZVM7 507 aa13.23□□□□□ -0.29
TRIM6-208ENST00000506134 NBPF4Q96M43 638 aa13.23□□□□□ -0.29
TRIM6-208ENST00000506134 NLRP2Q9NX02 1062 aa13.23□□□□□ -0.29
TRIM6-208ENST00000506134 CCDC9Q9Y3X0 531 aaKnown RBP13.23□□□□□ -0.29
TRIM6-208ENST00000506134 NWD2Q9ULI1 1742 aa13.23□□□□□ -0.29
TRIM6-208ENST00000506134 ABCC6O95255 1503 aa13.23□□□□□ -0.29
TRIM6-208ENST00000506134 CDK12Q9NYV4 1490 aaPredicted RBP13.23□□□□□ -0.29
TRIM6-208ENST00000506134 DIAPH1O60610 1272 aaKnown RBP13.22□□□□□ -0.29
TRIM6-208ENST00000506134 CFAP53Q96M91 514 aa13.22□□□□□ -0.29
TRIM6-208ENST00000506134 USP35Q9P2H5 1018 aa13.22□□□□□ -0.29
TRIM6-208ENST00000506134 TRPC5Q9UL62 973 aaPredicted RBP13.22□□□□□ -0.29
TRIM6-208ENST00000506134 SPATA31A5Q5VU36 1347 aa13.21□□□□□ -0.29
TRIM6-208ENST00000506134 SPATA31A7Q8IWB4 1347 aa13.21□□□□□ -0.29
TRIM6-208ENST00000506134 NRAPQ86VF7 1730 aa13.21□□□□□ -0.29
TRIM6-208ENST00000506134 POTEAQ6S8J7 498 aa13.21□□□□□ -0.29
TRIM6-208ENST00000506134 MIER1Q8N108 512 aa13.21□□□□□ -0.29
TRIM6-208ENST00000506134 GJD4Q96KN9 370 aaPredicted RBP13.21□□□□□ -0.29
TRIM6-208ENST00000506134 EYA1Q99502 592 aa13.21□□□□□ -0.29
TRIM6-208ENST00000506134 SPATA31A1Q5TZJ5 1347 aa13.21□□□□□ -0.3
TRIM6-208ENST00000506134 USHBP1Q8N6Y0 703 aa13.2□□□□□ -0.3
TRIM6-208ENST00000506134 CARD10Q9BWT7 1032 aa13.2□□□□□ -0.3
TRIM6-208ENST00000506134 ATRNO75882 1429 aa13.2□□□□□ -0.3
TRIM6-208ENST00000506134 CRB1P82279 1406 aa13.2□□□□□ -0.3
TRIM6-208ENST00000506134 RGPD2P0DJD1 1756 aa13.19□□□□□ -0.3
TRIM6-208ENST00000506134 COL3A1P02461 1466 aaPredicted RBP13.19□□□□□ -0.3
TRIM6-208ENST00000506134 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
TRIM6-208ENST00000506134 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
TRIM6-208ENST00000506134 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.18□□□□□ -0.3
TRIM6-208ENST00000506134 RXRBP28702 533 aa13.17□□□□□ -0.3
TRIM6-208ENST00000506134 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
TRIM6-208ENST00000506134 FAM98CQ17RN3 349 aaKnown RBP13.17□□□□□ -0.3
TRIM6-208ENST00000506134 AEBP1Q8IUX7 1158 aa13.17□□□□□ -0.3
TRIM6-208ENST00000506134 MRS2Q9HD23 443 aa13.17□□□□□ -0.3
TRIM6-208ENST00000506134 NUDCQ9Y266 331 aa13.17□□□□□ -0.3
TRIM6-208ENST00000506134 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
TRIM6-208ENST00000506134 IGSF1Q8N6C5 1336 aa13.16□□□□□ -0.3
TRIM6-208ENST00000506134 HMOX1P09601 288 aa13.16□□□□□ -0.3
TRIM6-208ENST00000506134 U2AF1L5P0DN76 240 aaPredicted RBP13.16□□□□□ -0.3
TRIM6-208ENST00000506134 U2AF1Q01081 240 aaKnown RBP eCLIP13.16□□□□□ -0.3
TRIM6-208ENST00000506134 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
TRIM6-208ENST00000506134 BARGINQ6ZT62 677 aa13.16□□□□□ -0.3
TRIM6-208ENST00000506134 THRAP3Q9Y2W1 955 aaKnown RBP13.16□□□□□ -0.3
TRIM6-208ENST00000506134 ONECUT3O60422 494 aaPredicted RBP13.15□□□□□ -0.3
TRIM6-208ENST00000506134 GLI3P10071 1580 aa13.14□□□□□ -0.31
TRIM6-208ENST00000506134 IL2RBP14784 551 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms