RNA–Protein interactions for RNA: ENST00000506024.5

PDE4D-214, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-214ENST00000506024 ATP1B4Q9UN42 357 aaPredicted RBP6.92□□□□□ -1.3
PDE4D-214ENST00000506024 ITSN2Q9NZM3 1697 aa6.92□□□□□ -1.3
PDE4D-214ENST00000506024 FMN1Q68DA7 1419 aa6.92□□□□□ -1.3
PDE4D-214ENST00000506024 PREX2Q70Z35 1606 aa6.91□□□□□ -1.3
PDE4D-214ENST00000506024 KIDINS220Q9ULH0 1771 aa6.91□□□□□ -1.3
PDE4D-214ENST00000506024 TLL1O43897 1013 aa6.91□□□□□ -1.3
PDE4D-214ENST00000506024 SCUBE3Q8IX30 993 aa6.91□□□□□ -1.3
PDE4D-214ENST00000506024 NKX2-3Q8TAU0 364 aa6.91□□□□□ -1.3
PDE4D-214ENST00000506024 KDM4CQ9H3R0 1056 aa6.91□□□□□ -1.3
PDE4D-214ENST00000506024 SLC27A5Q9Y2P5 690 aa6.91□□□□□ -1.3
PDE4D-214ENST00000506024 A2ML1A8K2U0 1454 aa6.91□□□□□ -1.3
PDE4D-214ENST00000506024 SHANK2Q9UPX8 1470 aa6.91□□□□□ -1.3
PDE4D-214ENST00000506024 SPIRE2Q8WWL2 714 aa6.9□□□□□ -1.3
PDE4D-214ENST00000506024 EEA1Q15075 1411 aa6.9□□□□□ -1.31
PDE4D-214ENST00000506024 SAMD9LQ8IVG5 1584 aa6.9□□□□□ -1.31
PDE4D-214ENST00000506024 NEURL4Q96JN8 1562 aa6.9□□□□□ -1.31
PDE4D-214ENST00000506024 CLTCQ00610 1675 aaKnown RBP6.9□□□□□ -1.31
PDE4D-214ENST00000506024 SUPT6HQ7KZ85 1726 aaKnown RBP6.9□□□□□ -1.31
PDE4D-214ENST00000506024 HOXA2O43364 376 aa6.89□□□□□ -1.31
PDE4D-214ENST00000506024 GUCA2AQ02747 115 aa6.89□□□□□ -1.31
PDE4D-214ENST00000506024 IFFO2Q5TF58 517 aa6.89□□□□□ -1.31
PDE4D-214ENST00000506024 HLA-CQ95604 372 aa6.89□□□□□ -1.31
PDE4D-214ENST00000506024 TBC1D2Q9BYX2 928 aa6.89□□□□□ -1.31
PDE4D-214ENST00000506024 PLXNC1O60486 1568 aa6.89□□□□□ -1.31
PDE4D-214ENST00000506024 ALKQ9UM73 1620 aa6.89□□□□□ -1.31
PDE4D-214ENST00000506024 CDC42BPBQ9Y5S2 1711 aa6.88□□□□□ -1.31
PDE4D-214ENST00000506024 SYCP2Q9BX26 1530 aa6.88□□□□□ -1.31
PDE4D-214ENST00000506024 DIXDC1Q155Q3 683 aa6.88□□□□□ -1.31
PDE4D-214ENST00000506024 SPSB2Q99619 263 aa6.88□□□□□ -1.31
PDE4D-214ENST00000506024 DNMT1P26358 1616 aaKnown RBP6.87□□□□□ -1.31
PDE4D-214ENST00000506024 VWDEQ8N2E2 1590 aa6.87□□□□□ -1.31
PDE4D-214ENST00000506024 ATP7AQ04656 1500 aa6.87□□□□□ -1.31
PDE4D-214ENST00000506024 A2MP01023 1474 aa6.87□□□□□ -1.31
PDE4D-214ENST00000506024 SPAG9O60271 1321 aaKnown RBP6.87□□□□□ -1.31
PDE4D-214ENST00000506024 A0A0G2JS52 829 aa6.87□□□□□ -1.31
PDE4D-214ENST00000506024 MOXD2PA6NHM9 499 aa6.87□□□□□ -1.31
PDE4D-214ENST00000506024 FMNL1O95466 1100 aaPredicted RBP6.87□□□□□ -1.31
PDE4D-214ENST00000506024 ADH1BP00325 375 aa6.87□□□□□ -1.31
PDE4D-214ENST00000506024 FDX1P10109 184 aa6.87□□□□□ -1.31
PDE4D-214ENST00000506024 NDUFV2P19404 249 aa6.87□□□□□ -1.31
PDE4D-214ENST00000506024 GGCXP38435 758 aa6.87□□□□□ -1.31
PDE4D-214ENST00000506024 Q3C1V9 767 aa6.87□□□□□ -1.31
PDE4D-214ENST00000506024 POLR1AO95602 1720 aaPredicted RBP6.87□□□□□ -1.31
PDE4D-214ENST00000506024 RNF17Q9BXT8 1623 aaKnown RBP6.87□□□□□ -1.31
PDE4D-214ENST00000506024 ARHGAP35Q9NRY4 1499 aa6.86□□□□□ -1.31
PDE4D-214ENST00000506024 TNRQ92752 1358 aa6.86□□□□□ -1.31
PDE4D-214ENST00000506024 FAM117AQ9C073 453 aa6.86□□□□□ -1.31
PDE4D-214ENST00000506024 RGS17Q9UGC6 210 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-214ENST00000506024 INO80Q9ULG1 1556 aaPredicted RBP6.86□□□□□ -1.31
PDE4D-214ENST00000506024 NPHP4O75161 1426 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-214ENST00000506024 BRPF1P55201 1214 aaPredicted RBP6.85□□□□□ -1.31
PDE4D-214ENST00000506024 PPP1R18Q6NYC8 613 aa6.85□□□□□ -1.31
PDE4D-214ENST00000506024 GGT6Q6P531 493 aa6.85□□□□□ -1.31
PDE4D-214ENST00000506024 BRICD5Q6PL45 260 aa6.85□□□□□ -1.31
PDE4D-214ENST00000506024 RNF19BQ6ZMZ0 732 aa6.85□□□□□ -1.31
PDE4D-214ENST00000506024 DDRGK1Q96HY6 314 aa6.85□□□□□ -1.31
PDE4D-214ENST00000506024 SLC6A16Q9GZN6 736 aa6.85□□□□□ -1.31
PDE4D-214ENST00000506024 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.85□□□□□ -1.31
PDE4D-214ENST00000506024 SYNMO15061 1565 aa6.85□□□□□ -1.31
PDE4D-214ENST00000506024 CCDC18Q5T9S5 1454 aa6.85□□□□□ -1.31
PDE4D-214ENST00000506024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.84□□□□□ -1.31
PDE4D-214ENST00000506024 C6orf229H3BNL8 230 aa6.84□□□□□ -1.31
PDE4D-214ENST00000506024 S1PR4O95977 384 aa6.84□□□□□ -1.31
PDE4D-214ENST00000506024 CSPP1Q1MSJ5 1256 aa6.84□□□□□ -1.31
PDE4D-214ENST00000506024 SYMPKQ92797 1274 aaKnown RBP6.84□□□□□ -1.31
PDE4D-214ENST00000506024 RSPH6AQ9H0K4 717 aa6.84□□□□□ -1.31
PDE4D-214ENST00000506024 ZNF777Q9ULD5 760 aaPredicted RBP6.84□□□□□ -1.31
PDE4D-214ENST00000506024 LRRC7Q96NW7 1537 aa6.84□□□□□ -1.31
PDE4D-214ENST00000506024 MYSM1Q5VVJ2 828 aa6.83□□□□□ -1.32
PDE4D-214ENST00000506024 RIC3Q7Z5B4 369 aa6.83□□□□□ -1.32
PDE4D-214ENST00000506024 ANKLE2Q86XL3 938 aa6.83□□□□□ -1.32
PDE4D-214ENST00000506024 IL27Q8NEV9 243 aa6.83□□□□□ -1.32
PDE4D-214ENST00000506024 THAP11Q96EK4 314 aa6.83□□□□□ -1.32
PDE4D-214ENST00000506024 POLR3EQ9NVU0 708 aa6.83□□□□□ -1.32
PDE4D-214ENST00000506024 SALL2Q9Y467 1007 aaPredicted RBP6.83□□□□□ -1.32
PDE4D-214ENST00000506024 CDC42BPAQ5VT25 1732 aa6.83□□□□□ -1.32
PDE4D-214ENST00000506024 MED14O60244 1454 aa6.83□□□□□ -1.32
PDE4D-214ENST00000506024 PZPP20742 1482 aa6.83□□□□□ -1.32
PDE4D-214ENST00000506024 PLEKHH2Q8IVE3 1493 aa6.83□□□□□ -1.32
PDE4D-214ENST00000506024 KIAA1107Q9UPP5 1409 aa6.83□□□□□ -1.32
PDE4D-214ENST00000506024 FAM135AQ9P2D6 1515 aa6.82□□□□□ -1.32
PDE4D-214ENST00000506024 LRRIQ1Q96JM4 1722 aa6.82□□□□□ -1.32
PDE4D-214ENST00000506024 PPEF1O14829 653 aaPredicted RBP6.82□□□□□ -1.32
PDE4D-214ENST00000506024 HNRNPMP52272 730 aaKnown RBP eCLIP6.82□□□□□ -1.329e-7■■■■□ 22.8
PDE4D-214ENST00000506024 RSBN1LQ6PCB5 846 aaPredicted RBP6.82□□□□□ -1.32
PDE4D-214ENST00000506024 POTEAQ6S8J7 498 aa6.82□□□□□ -1.32
PDE4D-214ENST00000506024 USB1Q9BQ65 265 aaKnown RBP6.82□□□□□ -1.32
PDE4D-214ENST00000506024 PCDHGC3Q9UN70 934 aa6.82□□□□□ -1.32
PDE4D-214ENST00000506024 DEPDC5O75140 1603 aa6.82□□□□□ -1.32
PDE4D-214ENST00000506024 KDM5DQ9BY66 1539 aa6.81□□□□□ -1.32
PDE4D-214ENST00000506024 IQGAP1P46940 1657 aa6.81□□□□□ -1.32
PDE4D-214ENST00000506024 NLRP1Q9C000 1473 aa6.81□□□□□ -1.32
PDE4D-214ENST00000506024 SPTLC1O15269 473 aa6.81□□□□□ -1.32
PDE4D-214ENST00000506024 FBXO31Q5XUX0 539 aaPredicted RBP6.81□□□□□ -1.32
PDE4D-214ENST00000506024 FAM160A2Q8N612 972 aaPredicted RBP6.81□□□□□ -1.32
PDE4D-214ENST00000506024 PCDHB15Q9Y5E8 787 aa6.81□□□□□ -1.32
PDE4D-214ENST00000506024 CASKIN1Q8WXD9 1431 aa6.81□□□□□ -1.32
PDE4D-214ENST00000506024 UGGT1Q9NYU2 1555 aa6.81□□□□□ -1.32
PDE4D-214ENST00000506024 GPATCH8Q9UKJ3 1502 aaKnown RBP6.81□□□□□ -1.32
PDE4D-214ENST00000506024 RNF223E7ERA6 249 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms