RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 AKAP12Q02952 1782 aa16.2■□□□□ 0.18
SIL1-208ENST00000505945 CSB-PGBD3P0DP91 1061 aa16.19■□□□□ 0.18
SIL1-208ENST00000505945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.19■□□□□ 0.18
SIL1-208ENST00000505945 OVOS2A0A0G2JMS6 1433 aa16.19■□□□□ 0.18
SIL1-208ENST00000505945 OVOS2A0A0J9YW53 1432 aa16.19■□□□□ 0.18
SIL1-208ENST00000505945 OVOS2Q6IE36 1432 aa16.19■□□□□ 0.18
SIL1-208ENST00000505945 PTF1AQ7RTS3 328 aa16.18■□□□□ 0.18
SIL1-208ENST00000505945 MARCH10Q8NA82 808 aaPredicted RBP16.18■□□□□ 0.18
SIL1-208ENST00000505945 RGPD5Q99666 1765 aa16.18■□□□□ 0.18
SIL1-208ENST00000505945 RREB1Q92766 1687 aa16.18■□□□□ 0.18
SIL1-208ENST00000505945 NUP188Q5SRE5 1749 aa16.17■□□□□ 0.18
SIL1-208ENST00000505945 PEAK1Q9H792 1746 aa16.17■□□□□ 0.18
SIL1-208ENST00000505945 LRRC37A3O60309 1634 aa16.17■□□□□ 0.18
SIL1-208ENST00000505945 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
SIL1-208ENST00000505945 CARD10Q9BWT7 1032 aa16.17■□□□□ 0.18
SIL1-208ENST00000505945 SBNO2Q9Y2G9 1366 aa16.16■□□□□ 0.18
SIL1-208ENST00000505945 CDCA7Q9BWT1 371 aaPredicted RBP16.16■□□□□ 0.18
SIL1-208ENST00000505945 PLSCR1O15162 318 aa16.15■□□□□ 0.18
SIL1-208ENST00000505945 NME9Q86XW9 330 aa16.15■□□□□ 0.18
SIL1-208ENST00000505945 BCL11BQ9C0K0 894 aaPredicted RBP16.15■□□□□ 0.18
SIL1-208ENST00000505945 SLC12A5Q9H2X9 1139 aa16.15■□□□□ 0.18
SIL1-208ENST00000505945 NFAT5O94916 1531 aa16.14■□□□□ 0.18
SIL1-208ENST00000505945 EXOC5O00471 708 aa16.14■□□□□ 0.17
SIL1-208ENST00000505945 SBF2Q86WG5 1849 aa16.14■□□□□ 0.17
SIL1-208ENST00000505945 CD163L1Q9NR16 1453 aa16.13■□□□□ 0.17
SIL1-208ENST00000505945 MON2Q7Z3U7 1717 aa16.13■□□□□ 0.17
SIL1-208ENST00000505945 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
SIL1-208ENST00000505945 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
SIL1-208ENST00000505945 HDGFL2Q7Z4V5 671 aaPredicted RBP16.12■□□□□ 0.17
SIL1-208ENST00000505945 WNK3Q9BYP7 1800 aa16.12■□□□□ 0.17
SIL1-208ENST00000505945 PROM2Q8N271 834 aa16.11■□□□□ 0.17
SIL1-208ENST00000505945 SPON1Q9HCB6 807 aa16.11■□□□□ 0.17
SIL1-208ENST00000505945 CCDC7Q96M83 1385 aa16.11■□□□□ 0.17
SIL1-208ENST00000505945 ANO8Q9HCE9 1232 aaPredicted RBP16.1■□□□□ 0.17
SIL1-208ENST00000505945 NLRP2Q9NX02 1062 aa16.1■□□□□ 0.17
SIL1-208ENST00000505945 BCL9O00512 1426 aa16.1■□□□□ 0.17
SIL1-208ENST00000505945 KCNQ2O43526 872 aa16.09■□□□□ 0.17
SIL1-208ENST00000505945 TERF2IPQ9NYB0 399 aa16.09■□□□□ 0.17
SIL1-208ENST00000505945 PPP1R1BQ9UD71 204 aaPredicted RBP16.08■□□□□ 0.16
SIL1-208ENST00000505945 ERBB3P21860 1342 aa16.08■□□□□ 0.16
SIL1-208ENST00000505945 ANKRD24Q8TF21 1146 aa16.07■□□□□ 0.16
SIL1-208ENST00000505945 PUS7Q96PZ0 661 aaKnown RBP16.07■□□□□ 0.16
SIL1-208ENST00000505945 PDGFDQ9GZP0 370 aaPredicted RBP16.07■□□□□ 0.16
SIL1-208ENST00000505945 A0A1W2PP64 1363 aa16.07■□□□□ 0.16
SIL1-208ENST00000505945 EDC4Q6P2E9 1401 aaKnown RBP16.07■□□□□ 0.16
SIL1-208ENST00000505945 ABCC6O95255 1503 aa16.07■□□□□ 0.16
SIL1-208ENST00000505945 RGPD3A6NKT7 1758 aaPredicted RBP16.07■□□□□ 0.16
SIL1-208ENST00000505945 RGPD4Q7Z3J3 1758 aa16.07■□□□□ 0.16
SIL1-208ENST00000505945 ST20-MTHFSA0A0A6YYL1 179 aa16.06■□□□□ 0.16
SIL1-208ENST00000505945 TXNRD1Q16881 649 aa16.06■□□□□ 0.16
SIL1-208ENST00000505945 TESK2Q96S53 571 aa16.06■□□□□ 0.16
SIL1-208ENST00000505945 LTN1O94822 1766 aa16.05■□□□□ 0.16
SIL1-208ENST00000505945 USP54Q70EL1 1684 aa16.05■□□□□ 0.16
SIL1-208ENST00000505945 TNS2Q63HR2 1409 aa16.05■□□□□ 0.16
SIL1-208ENST00000505945 IL2RBP14784 551 aa16.05■□□□□ 0.16
SIL1-208ENST00000505945 ACSBG1Q96GR2 724 aa16.05■□□□□ 0.16
SIL1-208ENST00000505945 LTV1Q96GA3 475 aaPredicted RBP16.03■□□□□ 0.16
SIL1-208ENST00000505945 ZBTB7AO95365 584 aa16.02■□□□□ 0.16
SIL1-208ENST00000505945 IP6K1Q92551 441 aa16.02■□□□□ 0.16
SIL1-208ENST00000505945 STK32BQ9NY57 414 aa16.02■□□□□ 0.16
SIL1-208ENST00000505945 FBLN1P23142 703 aa16.01■□□□□ 0.15
SIL1-208ENST00000505945 SLC15A2Q16348 729 aa16.01■□□□□ 0.15
SIL1-208ENST00000505945 KAT6BQ8WYB5 2073 aa16.01■□□□□ 0.15
SIL1-208ENST00000505945 COG3Q96JB2 828 aa16■□□□□ 0.15
SIL1-208ENST00000505945 ATF5Q9Y2D1 282 aaPredicted RBP16■□□□□ 0.15
SIL1-208ENST00000505945 CASZ1Q86V15 1759 aa16■□□□□ 0.15
SIL1-208ENST00000505945 NINLQ9Y2I6 1382 aa15.99■□□□□ 0.15
SIL1-208ENST00000505945 MAP3K19Q56UN5 1328 aa15.98■□□□□ 0.15
SIL1-208ENST00000505945 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
SIL1-208ENST00000505945 PTGER2P43116 358 aa15.98■□□□□ 0.15
SIL1-208ENST00000505945 DDX54Q8TDD1 881 aaKnown RBP15.98■□□□□ 0.15
SIL1-208ENST00000505945 NHSQ6T4R5 1651 aa15.98■□□□□ 0.15
SIL1-208ENST00000505945 AMPHP49418 695 aa15.97■□□□□ 0.15
SIL1-208ENST00000505945 DCAF8L1A6NGE4 600 aa15.96■□□□□ 0.15
SIL1-208ENST00000505945 YY1P25490 414 aa15.96■□□□□ 0.15
SIL1-208ENST00000505945 HOXC9P31274 260 aa15.96■□□□□ 0.15
SIL1-208ENST00000505945 TRIM26Q12899 539 aaPredicted RBP15.96■□□□□ 0.15
SIL1-208ENST00000505945 ANKRD36BQ8N2N9 1353 aa15.95■□□□□ 0.14
SIL1-208ENST00000505945 BTAF1O14981 1849 aa15.94■□□□□ 0.14
SIL1-208ENST00000505945 FYB1O15117 783 aa15.94■□□□□ 0.14
SIL1-208ENST00000505945 TMF1P82094 1093 aa15.94■□□□□ 0.14
SIL1-208ENST00000505945 GGNBP2Q9H3C7 697 aa15.94■□□□□ 0.14
SIL1-208ENST00000505945 LRRC4BQ9NT99 713 aa15.94■□□□□ 0.14
SIL1-208ENST00000505945 RRS1Q15050 365 aaKnown RBP15.93■□□□□ 0.14
SIL1-208ENST00000505945 MTFR1LQ9H019 292 aa15.93■□□□□ 0.14
SIL1-208ENST00000505945 USP47Q96K76 1375 aa15.92■□□□□ 0.14
SIL1-208ENST00000505945 PRIM1P49642 420 aaKnown RBP15.92■□□□□ 0.14
SIL1-208ENST00000505945 ZNF827Q17R98 1081 aa15.92■□□□□ 0.14
SIL1-208ENST00000505945 SYTL4Q96C24 671 aaPredicted RBP15.92■□□□□ 0.14
SIL1-208ENST00000505945 MYOM1P52179 1685 aa15.92■□□□□ 0.14
SIL1-208ENST00000505945 ZCRB1Q8TBF4 217 aaKnown RBP15.91■□□□□ 0.14
SIL1-208ENST00000505945 SGIP1Q9BQI5 828 aa15.91■□□□□ 0.14
SIL1-208ENST00000505945 FAM208AQ9UK61 1670 aaKnown RBP15.91■□□□□ 0.14
SIL1-208ENST00000505945 RGPD2P0DJD1 1756 aa15.9■□□□□ 0.14
SIL1-208ENST00000505945 KCNQ4P56696 695 aa15.9■□□□□ 0.14
SIL1-208ENST00000505945 NBPF6Q5VWK0 638 aa15.9■□□□□ 0.14
SIL1-208ENST00000505945 NBPF4Q96M43 638 aa15.9■□□□□ 0.14
SIL1-208ENST00000505945 SYT17Q9BSW7 474 aa15.9■□□□□ 0.14
SIL1-208ENST00000505945 FHDC1Q9C0D6 1143 aaPredicted RBP15.9■□□□□ 0.14
SIL1-208ENST00000505945 PAPPAQ13219 1627 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms