RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 R3HDM1Q15032 1099 aaKnown RBP35.01■■■■□ 3.2
HERC4-212ENST00000505760 WDR17Q8IZU2 1322 aa35.01■■■■□ 3.19
HERC4-212ENST00000505760 C11orf95C9JLR9 678 aaPredicted RBP34.99■■■■□ 3.19
HERC4-212ENST00000505760 TMC1Q8TDI8 760 aa34.99■■■■□ 3.19
HERC4-212ENST00000505760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.98■■■■□ 3.19
HERC4-212ENST00000505760 DDB1Q16531 1140 aa34.97■■■■□ 3.19
HERC4-212ENST00000505760 NFAT5O94916 1531 aa34.96■■■■□ 3.19
HERC4-212ENST00000505760 LRRC37A3O60309 1634 aa34.96■■■■□ 3.19
HERC4-212ENST00000505760 OVOS2A0A0G2JMS6 1433 aa34.96■■■■□ 3.19
HERC4-212ENST00000505760 OVOS2A0A0J9YW53 1432 aa34.96■■■■□ 3.19
HERC4-212ENST00000505760 OVOS2Q6IE36 1432 aa34.96■■■■□ 3.19
HERC4-212ENST00000505760 CSB-PGBD3P0DP91 1061 aa34.95■■■■□ 3.19
HERC4-212ENST00000505760 WNK3Q9BYP7 1800 aa34.95■■■■□ 3.18
HERC4-212ENST00000505760 HDGFL2Q7Z4V5 671 aaPredicted RBP34.94■■■■□ 3.18
HERC4-212ENST00000505760 CD163L1Q9NR16 1453 aa34.93■■■■□ 3.18
HERC4-212ENST00000505760 RREB1Q92766 1687 aa34.92■■■■□ 3.18
HERC4-212ENST00000505760 CDCA7Q9BWT1 371 aaPredicted RBP34.92■■■■□ 3.18
HERC4-212ENST00000505760 SLC12A5Q9H2X9 1139 aa34.91■■■■□ 3.18
HERC4-212ENST00000505760 PEAK1Q9H792 1746 aa34.91■■■■□ 3.18
HERC4-212ENST00000505760 USP31Q70CQ4 1352 aa34.9■■■■□ 3.18
HERC4-212ENST00000505760 CARD10Q9BWT7 1032 aa34.9■■■■□ 3.18
HERC4-212ENST00000505760 NME9Q86XW9 330 aa34.89■■■■□ 3.18
HERC4-212ENST00000505760 NUP188Q5SRE5 1749 aa34.89■■■■□ 3.18
HERC4-212ENST00000505760 SBF2Q86WG5 1849 aa34.88■■■■□ 3.17
HERC4-212ENST00000505760 ABCC6O95255 1503 aa34.88■■■■□ 3.17
HERC4-212ENST00000505760 TRIM26Q12899 539 aaPredicted RBP34.88■■■■□ 3.17
HERC4-212ENST00000505760 TERF2IPQ9NYB0 399 aa34.88■■■■□ 3.17
HERC4-212ENST00000505760 USP54Q70EL1 1684 aa34.88■■■■□ 3.17
HERC4-212ENST00000505760 NBPF14Q5TI25 921 aa34.85■■■■□ 3.17
HERC4-212ENST00000505760 EDC4Q6P2E9 1401 aaKnown RBP34.85■■■■□ 3.17
HERC4-212ENST00000505760 PUS7Q96PZ0 661 aaKnown RBP34.85■■■■□ 3.17
HERC4-212ENST00000505760 LTN1O94822 1766 aa34.84■■■■□ 3.17
HERC4-212ENST00000505760 A0A1W2PP64 1363 aa34.82■■■■□ 3.16
HERC4-212ENST00000505760 CCDC7Q96M83 1385 aa34.82■■■■□ 3.16
HERC4-212ENST00000505760 ST20-MTHFSA0A0A6YYL1 179 aa34.81■■■■□ 3.16
HERC4-212ENST00000505760 MARCH10Q8NA82 808 aaPredicted RBP34.81■■■■□ 3.16
HERC4-212ENST00000505760 TESK2Q96S53 571 aa34.79■■■■□ 3.16
HERC4-212ENST00000505760 EXOC5O00471 708 aa34.78■■■■□ 3.16
HERC4-212ENST00000505760 BCL11BQ9C0K0 894 aaPredicted RBP34.78■■■■□ 3.16
HERC4-212ENST00000505760 RGPD3A6NKT7 1758 aaPredicted RBP34.77■■■■□ 3.16
HERC4-212ENST00000505760 RGPD4Q7Z3J3 1758 aa34.77■■■■□ 3.16
HERC4-212ENST00000505760 SLC24A1O60721 1099 aa34.77■■■■□ 3.16
HERC4-212ENST00000505760 ERBB3P21860 1342 aa34.76■■■■□ 3.15
HERC4-212ENST00000505760 NINLQ9Y2I6 1382 aa34.75■■■■□ 3.15
HERC4-212ENST00000505760 PLSCR1O15162 318 aa34.75■■■■□ 3.15
HERC4-212ENST00000505760 NLRP2Q9NX02 1062 aa34.75■■■■□ 3.15
HERC4-212ENST00000505760 BCL9O00512 1426 aa34.74■■■■□ 3.15
HERC4-212ENST00000505760 PTF1AQ7RTS3 328 aa34.72■■■■□ 3.15
HERC4-212ENST00000505760 TNS2Q63HR2 1409 aa34.71■■■■□ 3.15
HERC4-212ENST00000505760 ANKRD24Q8TF21 1146 aa34.7■■■■□ 3.15
HERC4-212ENST00000505760 IL2RBP14784 551 aa34.66■■■■□ 3.14
HERC4-212ENST00000505760 COG3Q96JB2 828 aa34.64■■■■□ 3.14
HERC4-212ENST00000505760 USP47Q96K76 1375 aa34.62■■■■□ 3.13
HERC4-212ENST00000505760 TMF1P82094 1093 aa34.62■■■■□ 3.13
HERC4-212ENST00000505760 IP6K1Q92551 441 aa34.62■■■■□ 3.13
HERC4-212ENST00000505760 ANKRD36BQ8N2N9 1353 aa34.6■■■■□ 3.13
HERC4-212ENST00000505760 PROM2Q8N271 834 aa34.59■■■■□ 3.13
HERC4-212ENST00000505760 SPON1Q9HCB6 807 aa34.59■■■■□ 3.13
HERC4-212ENST00000505760 LTV1Q96GA3 475 aaPredicted RBP34.58■■■■□ 3.13
HERC4-212ENST00000505760 ANO8Q9HCE9 1232 aaPredicted RBP34.58■■■■□ 3.13
HERC4-212ENST00000505760 KAT6BQ8WYB5 2073 aa34.58■■■■□ 3.13
HERC4-212ENST00000505760 NHSQ6T4R5 1651 aa34.57■■■■□ 3.13
HERC4-212ENST00000505760 FAM208AQ9UK61 1670 aaKnown RBP34.57■■■■□ 3.13
HERC4-212ENST00000505760 KCNQ2O43526 872 aa34.57■■■■□ 3.12
HERC4-212ENST00000505760 ACSBG1Q96GR2 724 aa34.56■■■■□ 3.12
HERC4-212ENST00000505760 TXNRD1Q16881 649 aa34.55■■■■□ 3.12
HERC4-212ENST00000505760 AMPHP49418 695 aa34.54■■■■□ 3.12
HERC4-212ENST00000505760 PPP1R1BQ9UD71 204 aaPredicted RBP34.54■■■■□ 3.12
HERC4-212ENST00000505760 MAP3K19Q56UN5 1328 aa34.54■■■■□ 3.12
HERC4-212ENST00000505760 FBLN1P23142 703 aa34.51■■■■□ 3.12
HERC4-212ENST00000505760 CDCA8Q53HL2 280 aa34.51■■■■□ 3.12
HERC4-212ENST00000505760 HOXC9P31274 260 aa34.5■■■■□ 3.11
HERC4-212ENST00000505760 STK32BQ9NY57 414 aa34.49■■■■□ 3.11
HERC4-212ENST00000505760 CASZ1Q86V15 1759 aa34.49■■■■□ 3.11
HERC4-212ENST00000505760 BTAF1O14981 1849 aa34.47■■■■□ 3.11
HERC4-212ENST00000505760 FYB1O15117 783 aa34.46■■■■□ 3.11
HERC4-212ENST00000505760 GGNBP2Q9H3C7 697 aa34.46■■■■□ 3.11
HERC4-212ENST00000505760 DDX54Q8TDD1 881 aaKnown RBP34.45■■■■□ 3.11
HERC4-212ENST00000505760 RGPD2P0DJD1 1756 aa34.44■■■■□ 3.1
HERC4-212ENST00000505760 PDGFDQ9GZP0 370 aaPredicted RBP34.44■■■■□ 3.1
HERC4-212ENST00000505760 TIMELESSQ9UNS1 1208 aa34.44■■■■□ 3.1
HERC4-212ENST00000505760 RRS1Q15050 365 aaKnown RBP34.43■■■■□ 3.1
HERC4-212ENST00000505760 SLC15A2Q16348 729 aa34.43■■■■□ 3.1
HERC4-212ENST00000505760 RTL1A6NKG5 1358 aa34.43■■■■□ 3.1
HERC4-212ENST00000505760 KIF20BQ96Q89 1820 aa34.42■■■■□ 3.1
HERC4-212ENST00000505760 PCGF6Q9BYE7 350 aa34.41■■■■□ 3.1
HERC4-212ENST00000505760 ZBTB7AO95365 584 aa34.4■■■■□ 3.1
HERC4-212ENST00000505760 CLSPNQ9HAW4 1339 aa34.37■■■■□ 3.09
HERC4-212ENST00000505760 SMG6Q86US8 1419 aaKnown RBP34.36■■■■□ 3.09
HERC4-212ENST00000505760 MYOM1P52179 1685 aa34.35■■■■□ 3.09
HERC4-212ENST00000505760 ZCRB1Q8TBF4 217 aaKnown RBP34.34■■■■□ 3.09
HERC4-212ENST00000505760 ATF5Q9Y2D1 282 aaPredicted RBP34.33■■■■□ 3.09
HERC4-212ENST00000505760 MEGF6O75095 1541 aa34.33■■■■□ 3.09
HERC4-212ENST00000505760 NBPF6Q5VWK0 638 aa34.32■■■■□ 3.08
HERC4-212ENST00000505760 SYTL4Q96C24 671 aaPredicted RBP34.32■■■■□ 3.08
HERC4-212ENST00000505760 NBPF4Q96M43 638 aa34.32■■■■□ 3.08
HERC4-212ENST00000505760 PAPPAQ13219 1627 aa34.32■■■■□ 3.08
HERC4-212ENST00000505760 SHANK3Q9BYB0 1731 aa34.31■■■■□ 3.08
HERC4-212ENST00000505760 DCAF8L1A6NGE4 600 aa34.31■■■■□ 3.08
HERC4-212ENST00000505760 DOT1LQ8TEK3 1739 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms